RNA–Protein interactions for RNA: ENST00000636705.1

CLN5-214, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-214ENST00000636705 NYAP2Q9P242 653 aa4.36□□□□□ -1.71
CLN5-214ENST00000636705 IFT80Q9P2H3 777 aaPredicted RBP4.36□□□□□ -1.71
CLN5-214ENST00000636705 TRAF6Q9Y4K3 522 aa4.36□□□□□ -1.71
CLN5-214ENST00000636705 AK9Q5TCS8 1911 aa4.36□□□□□ -1.71
CLN5-214ENST00000636705 RASA4BC9J798 803 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 AGRPO00253 132 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 RASA4O43374 803 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 SURF6O75683 361 aaKnown RBP4.35□□□□□ -1.71
CLN5-214ENST00000636705 EPHX1P07099 455 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 TARSP26639 723 aaKnown RBP4.35□□□□□ -1.71
CLN5-214ENST00000636705 EPHB4P54760 987 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 TYRO3Q06418 890 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 PRKG2Q13237 762 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 TMEM132BQ14DG7 1078 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.35□□□□□ -1.71
CLN5-214ENST00000636705 DNAJC21Q5F1R6 531 aaKnown RBP4.35□□□□□ -1.71
CLN5-214ENST00000636705 ZNF787Q6DD87 383 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 RCSD1Q6JBY9 416 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 TMEM214Q6NUQ4 689 aaKnown RBP4.35□□□□□ -1.71
CLN5-214ENST00000636705 KRT25Q7Z3Z0 450 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 PTRH1Q86Y79 214 aaKnown RBP4.35□□□□□ -1.71
CLN5-214ENST00000636705 TAB3Q8N5C8 712 aaPredicted RBP4.35□□□□□ -1.71
CLN5-214ENST00000636705 OR2C3Q8N628 320 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 USP38Q8NB14 1042 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 ZNF384Q8TF68 577 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 SNX21Q969T3 373 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 PMEPA1Q969W9 287 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 PPP1R14AQ96A00 147 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 ZBTB10Q96DT7 871 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 RIPOR3Q96MK2 946 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 ZMAT2Q96NC0 199 aaKnown RBP4.35□□□□□ -1.71
CLN5-214ENST00000636705 NUP88Q99567 741 aaPredicted RBP4.35□□□□□ -1.71
CLN5-214ENST00000636705 AGO4Q9HCK5 861 aaKnown RBP4.35□□□□□ -1.71
CLN5-214ENST00000636705 ITM2CQ9NQX7 267 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 ARPP21Q9UBL0 812 aaPredicted RBP4.35□□□□□ -1.71
CLN5-214ENST00000636705 ZNF214Q9UL59 606 aaPredicted RBP4.35□□□□□ -1.71
CLN5-214ENST00000636705 ZSWIM8A7E2V4 1837 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 A0A1B0GUL6 1792 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 FSD2A1L4K1 749 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 MMP20O60882 483 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 HMMRO75330 724 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 SASH3O75995 380 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 ZBED1O96006 694 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 FGFR1P11362 822 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 ATP1A3P13637 1013 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 GNAT2P19087 354 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 ATP4AP20648 1035 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 PPM1AP35813 382 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 KRT20P35900 424 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 FSCN1Q16658 493 aaKnown RBP4.35□□□□□ -1.71
CLN5-214ENST00000636705 LEXMQ3ZCV2 418 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 WDR44Q5JSH3 913 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 SLC9C2Q5TAH2 1124 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 TDRD10Q5VZ19 366 aaKnown RBP4.35□□□□□ -1.71
CLN5-214ENST00000636705 SNRNP48Q6IEG0 339 aaKnown RBP4.35□□□□□ -1.71
CLN5-214ENST00000636705 ZCCHC8Q6NZY4 707 aaKnown RBP4.35□□□□□ -1.71
CLN5-214ENST00000636705 CYP26C1Q6V0L0 522 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 NLRC3Q7RTR2 1065 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 LSMEM1Q8N8F7 131 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 LRRN4CLQ8ND94 238 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 DEPTORQ8TB45 409 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 CAGE1Q8TC20 777 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 SSH3Q8TE77 659 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 PPP2R3CQ969Q6 453 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 SH3KBP1Q96B97 665 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 INSM2Q96T92 566 aaPredicted RBP4.35□□□□□ -1.71
CLN5-214ENST00000636705 MEIS3Q99687 375 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 GRIP2Q9C0E4 1043 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 VPS11Q9H270 941 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 CXorf56Q9H5V9 222 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 ACAD9Q9H845 621 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 POLMQ9NP87 494 aaPredicted RBP4.35□□□□□ -1.71
CLN5-214ENST00000636705 TBC1D22BQ9NU19 505 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 MKS1Q9NXB0 559 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 CEP131Q9UPN4 1083 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 SLC12A7Q9Y666 1083 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 MTCH2Q9Y6C9 303 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 ZNF536O15090 1300 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 ZNF236Q9UL36 1845 aa4.35□□□□□ -1.71
CLN5-214ENST00000636705 A0A096LPE4 126 aa4.34□□□□□ -1.71
CLN5-214ENST00000636705 A0A1W2PPZ6 126 aa4.34□□□□□ -1.71
CLN5-214ENST00000636705 TSPY2A6NKD2 308 aa4.34□□□□□ -1.71
CLN5-214ENST00000636705 SLC22A31A6NKX4 558 aa4.34□□□□□ -1.71
CLN5-214ENST00000636705 GOLIM4O00461 696 aa4.34□□□□□ -1.71
CLN5-214ENST00000636705 PLA2G6O60733 806 aa4.34□□□□□ -1.71
CLN5-214ENST00000636705 CRTAMO95727 393 aa4.34□□□□□ -1.71
CLN5-214ENST00000636705 SNAI1O95863 264 aaPredicted RBP4.34□□□□□ -1.71
CLN5-214ENST00000636705 TSPY3P0CV98 308 aa4.34□□□□□ -1.71
CLN5-214ENST00000636705 TSPY8P0CW00 308 aa4.34□□□□□ -1.71
CLN5-214ENST00000636705 ITGB8P26012 769 aa4.34□□□□□ -1.71
CLN5-214ENST00000636705 ATICP31939 592 aa4.34□□□□□ -1.71
CLN5-214ENST00000636705 CTSOP43234 321 aaPredicted RBP4.34□□□□□ -1.71
CLN5-214ENST00000636705 PHKA2P46019 1235 aa4.34□□□□□ -1.71
CLN5-214ENST00000636705 NT5C2P49902 561 aa4.34□□□□□ -1.71
CLN5-214ENST00000636705 JAG1P78504 1218 aa4.34□□□□□ -1.71
CLN5-214ENST00000636705 TSPY1Q01534 308 aa4.34□□□□□ -1.71
CLN5-214ENST00000636705 PFKPQ01813 784 aa4.34□□□□□ -1.71
CLN5-214ENST00000636705 SFSWAPQ12872 951 aaKnown RBP4.34□□□□□ -1.71
CLN5-214ENST00000636705 SEMA5AQ13591 1074 aa4.34□□□□□ -1.71
CLN5-214ENST00000636705 TERF2Q15554 542 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms