RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 MYBP10242 640 aa19.67■□□□□ 0.74
PNKP-225ENST00000636214 GUCY2CP25092 1073 aa19.67■□□□□ 0.74
PNKP-225ENST00000636214 PSMD5Q16401 504 aa19.67■□□□□ 0.74
PNKP-225ENST00000636214 GLRA4Q5JXX5 417 aa19.67■□□□□ 0.74
PNKP-225ENST00000636214 LIN9Q5TKA1 542 aa19.67■□□□□ 0.74
PNKP-225ENST00000636214 C1orf186Q6ZWK4 172 aa19.67■□□□□ 0.74
PNKP-225ENST00000636214 CALML4Q96GE6 196 aa19.67■□□□□ 0.74
PNKP-225ENST00000636214 UROC1Q96N76 676 aa19.67■□□□□ 0.74
PNKP-225ENST00000636214 PLIN2Q99541 437 aa19.67■□□□□ 0.74
PNKP-225ENST00000636214 PAAF1Q9BRP4 392 aa19.67■□□□□ 0.74
PNKP-225ENST00000636214 ARHGAP28Q9P2N2 729 aa19.67■□□□□ 0.74
PNKP-225ENST00000636214 CACNG4Q9UBN1 327 aa19.67■□□□□ 0.74
PNKP-225ENST00000636214 DENND4AQ7Z401 1863 aa19.67■□□□□ 0.74
PNKP-225ENST00000636214 SLC16A4O15374 487 aa19.66■□□□□ 0.74
PNKP-225ENST00000636214 TGM5O43548 720 aa19.66■□□□□ 0.74
PNKP-225ENST00000636214 ASGR2P07307 311 aa19.66■□□□□ 0.74
PNKP-225ENST00000636214 SPATA31D3P0C874 917 aa19.66■□□□□ 0.74
PNKP-225ENST00000636214 HARSP12081 509 aaKnown RBP19.66■□□□□ 0.74
PNKP-225ENST00000636214 RPL17P18621 184 aaKnown RBP19.66■□□□□ 0.74
PNKP-225ENST00000636214 GBP2P32456 591 aaPredicted RBP19.66■□□□□ 0.74
PNKP-225ENST00000636214 GRM5P41594 1212 aa19.66■□□□□ 0.74
PNKP-225ENST00000636214 OSTNP61366 133 aa19.66■□□□□ 0.74
PNKP-225ENST00000636214 RAD51AP2Q09MP3 1159 aa19.66■□□□□ 0.74
PNKP-225ENST00000636214 PRSS55Q6UWB4 352 aaPredicted RBP19.66■□□□□ 0.74
PNKP-225ENST00000636214 SPATA31D4Q6ZUB0 917 aa19.66■□□□□ 0.74
PNKP-225ENST00000636214 KCNK18Q7Z418 384 aa19.66■□□□□ 0.74
PNKP-225ENST00000636214 BRAPQ7Z569 592 aa19.66■□□□□ 0.74
PNKP-225ENST00000636214 AK8Q96MA6 479 aa19.66■□□□□ 0.74
PNKP-225ENST00000636214 ACO2Q99798 780 aaKnown RBP19.66■□□□□ 0.74
PNKP-225ENST00000636214 TARS2Q9BW92 718 aaKnown RBP19.66■□□□□ 0.74
PNKP-225ENST00000636214 SLC38A7Q9NVC3 462 aa19.66■□□□□ 0.74
PNKP-225ENST00000636214 ZDHHC7Q9NXF8 308 aa19.66■□□□□ 0.74
PNKP-225ENST00000636214 KCND2Q9NZV8 630 aa19.66■□□□□ 0.74
PNKP-225ENST00000636214 CITO14578 2027 aa19.65■□□□□ 0.74
PNKP-225ENST00000636214 H0YCG3 227 aa19.65■□□□□ 0.74
PNKP-225ENST00000636214 SLC26A4O43511 780 aa19.65■□□□□ 0.74
PNKP-225ENST00000636214 TRAPPC3O43617 180 aa19.65■□□□□ 0.74
PNKP-225ENST00000636214 RFPL2O75678 378 aa19.65■□□□□ 0.74
PNKP-225ENST00000636214 B3GAT3O94766 335 aa19.65■□□□□ 0.74
PNKP-225ENST00000636214 PLA2G4BP0C869 781 aa19.65■□□□□ 0.74
PNKP-225ENST00000636214 PLS3P13797 630 aa19.65■□□□□ 0.74
PNKP-225ENST00000636214 UBA7P41226 1012 aa19.65■□□□□ 0.74
PNKP-225ENST00000636214 MATR3P43243 847 aaKnown RBP eCLIP19.65■□□□□ 0.74
PNKP-225ENST00000636214 RTP2Q5QGT7 225 aa19.65■□□□□ 0.74
PNKP-225ENST00000636214 HYIQ5T013 277 aa19.65■□□□□ 0.74
PNKP-225ENST00000636214 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.65■□□□□ 0.74
PNKP-225ENST00000636214 DAW1Q8N136 415 aa19.65■□□□□ 0.74
PNKP-225ENST00000636214 PIK3R5Q8WYR1 880 aa19.65■□□□□ 0.74
PNKP-225ENST00000636214 ASIC4Q96FT7 647 aa19.65■□□□□ 0.74
PNKP-225ENST00000636214 ACAP3Q96P50 834 aa19.65■□□□□ 0.74
PNKP-225ENST00000636214 CDT1Q9H211 546 aa19.65■□□□□ 0.74
PNKP-225ENST00000636214 MFSD1Q9H3U5 465 aa19.65■□□□□ 0.74
PNKP-225ENST00000636214 CLUHO75153 1309 aa19.65■□□□□ 0.74
PNKP-225ENST00000636214 VPS37CA5D8V6 355 aaPredicted RBP19.64■□□□□ 0.73
PNKP-225ENST00000636214 SFI1A8K8P3 1242 aa19.64■□□□□ 0.73
PNKP-225ENST00000636214 BRD1O95696 1058 aa19.64■□□□□ 0.73
PNKP-225ENST00000636214 MCF2P10911 925 aa19.64■□□□□ 0.73
PNKP-225ENST00000636214 PDCP20941 246 aa19.64■□□□□ 0.73
PNKP-225ENST00000636214 MPZL3Q6UWV2 235 aa19.64■□□□□ 0.73
PNKP-225ENST00000636214 SYT2Q8N9I0 419 aaPredicted RBP19.64■□□□□ 0.73
PNKP-225ENST00000636214 SPIRE2Q8WWL2 714 aa19.64■□□□□ 0.73
PNKP-225ENST00000636214 BICD1Q96G01 975 aa19.64■□□□□ 0.73
PNKP-225ENST00000636214 PNMA5Q96PV4 448 aa19.64■□□□□ 0.73
PNKP-225ENST00000636214 RHOBTB2Q9BYZ6 727 aa19.64■□□□□ 0.73
PNKP-225ENST00000636214 WDR6Q9NNW5 1121 aaKnown RBP19.64■□□□□ 0.73
PNKP-225ENST00000636214 LARSQ9P2J5 1176 aaKnown RBP19.64■□□□□ 0.73
PNKP-225ENST00000636214 ANKFY1Q9P2R3 1169 aa19.64■□□□□ 0.73
PNKP-225ENST00000636214 TMEM189-UBE2V1I3L0A0 370 aa19.63■□□□□ 0.73
PNKP-225ENST00000636214 KRT18P05783 430 aaKnown RBP19.63■□□□□ 0.73
PNKP-225ENST00000636214 PTPN5P54829 565 aa19.63■□□□□ 0.73
PNKP-225ENST00000636214 MAPK7Q13164 816 aa19.63■□□□□ 0.73
PNKP-225ENST00000636214 NOLC1Q14978 699 aaKnown RBP eCLIP19.63■□□□□ 0.73
PNKP-225ENST00000636214 DCLRE1AQ6PJP8 1040 aa19.63■□□□□ 0.73
PNKP-225ENST00000636214 DDX27Q96GQ7 796 aaKnown RBP19.63■□□□□ 0.73
PNKP-225ENST00000636214 PPP1R10Q96QC0 940 aaKnown RBP19.63■□□□□ 0.73
PNKP-225ENST00000636214 SMIM28A0A1B0GU29 152 aa19.62■□□□□ 0.73
PNKP-225ENST00000636214 HOXD11P31277 338 aaPredicted RBP19.62■□□□□ 0.73
PNKP-225ENST00000636214 CLCNKBP51801 687 aa19.62■□□□□ 0.73
PNKP-225ENST00000636214 NHLH1Q02575 133 aa19.62■□□□□ 0.73
PNKP-225ENST00000636214 NAB2Q15742 525 aa19.62■□□□□ 0.73
PNKP-225ENST00000636214 TMEM119Q4V9L6 283 aa19.62■□□□□ 0.73
PNKP-225ENST00000636214 CEP120Q8N960 986 aa19.62■□□□□ 0.73
PNKP-225ENST00000636214 LNX1Q8TBB1 728 aaPredicted RBP19.62■□□□□ 0.73
PNKP-225ENST00000636214 PRKD2Q9BZL6 878 aa19.62■□□□□ 0.73
PNKP-225ENST00000636214 CXCL16Q9H2A7 254 aa19.62■□□□□ 0.73
PNKP-225ENST00000636214 IGSF9Q9P2J2 1179 aa19.62■□□□□ 0.73
PNKP-225ENST00000636214 WDFY4Q6ZS81 3184 aa19.62■□□□□ 0.73
PNKP-225ENST00000636214 XYLBO75191 536 aa19.61■□□□□ 0.73
PNKP-225ENST00000636214 TOM1L1O75674 476 aa19.61■□□□□ 0.73
PNKP-225ENST00000636214 ZMYND10O75800 440 aa19.61■□□□□ 0.73
PNKP-225ENST00000636214 FAM13AO94988 1023 aa19.61■□□□□ 0.73
PNKP-225ENST00000636214 LONP1P36776 959 aaKnown RBP19.61■□□□□ 0.73
PNKP-225ENST00000636214 SLC12A3P55017 1021 aa19.61■□□□□ 0.73
PNKP-225ENST00000636214 TDGQ13569 410 aa19.61■□□□□ 0.73
PNKP-225ENST00000636214 DHX8Q14562 1220 aaKnown RBP19.61■□□□□ 0.73
PNKP-225ENST00000636214 PPM1LQ5SGD2 360 aa19.61■□□□□ 0.73
PNKP-225ENST00000636214 TAS1R3Q7RTX0 852 aa19.61■□□□□ 0.73
PNKP-225ENST00000636214 GPBP1Q86WP2 473 aa19.61■□□□□ 0.73
PNKP-225ENST00000636214 TMEM161BQ8NDZ6 487 aa19.61■□□□□ 0.73
PNKP-225ENST00000636214 FEZF2Q8TBJ5 459 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms