RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 CDT1Q9H211 546 aa-0.73□□□□□ -2.53
CDKL5-210ENST00000636046 PARLQ9H300 379 aa-0.73□□□□□ -2.53
CDKL5-210ENST00000636046 ASB8Q9H765 288 aa-0.73□□□□□ -2.53
CDKL5-210ENST00000636046 KANSL2Q9H9L4 492 aa-0.73□□□□□ -2.53
CDKL5-210ENST00000636046 SPON1Q9HCB6 807 aa-0.73□□□□□ -2.53
CDKL5-210ENST00000636046 FAM217BQ9NTX9 383 aaPredicted RBP-0.73□□□□□ -2.53
CDKL5-210ENST00000636046 RNF181Q9P0P0 153 aa-0.73□□□□□ -2.53
CDKL5-210ENST00000636046 CAMSAP3Q9P1Y5 1249 aaPredicted RBP-0.73□□□□□ -2.53
CDKL5-210ENST00000636046 WNT16Q9UBV4 365 aa-0.73□□□□□ -2.53
CDKL5-210ENST00000636046 NUDT5Q9UKK9 219 aa-0.73□□□□□ -2.53
CDKL5-210ENST00000636046 PADI4Q9UM07 663 aa-0.73□□□□□ -2.53
CDKL5-210ENST00000636046 PCDHGC5Q9Y5F6 944 aa-0.73□□□□□ -2.53
CDKL5-210ENST00000636046 NUMBLQ9Y6R0 609 aa-0.73□□□□□ -2.53
CDKL5-210ENST00000636046 UMODL1Q5DID0 1318 aa-0.73□□□□□ -2.53
CDKL5-210ENST00000636046 WDR17Q8IZU2 1322 aa-0.73□□□□□ -2.53
CDKL5-210ENST00000636046 KAT6AQ92794 2004 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 EPG5Q9HCE0 2579 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 COL5A3P25940 1745 aaPredicted RBP-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 DNHD1Q96M86 4753 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 FAM83GA6ND36 823 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 MOXD2PA6NHM9 499 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 USP17L5A8MUK1 530 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 USP17L15C9J2P7 530 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 C22orf46C9J442 243 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 PRRT4C9JH25 899 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 USP17L13C9JLJ4 530 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 USP17L12C9JPN9 530 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 USP17L11C9JVI0 530 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 USP17L21D6R901 530 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 USP17L18D6R9N7 530 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 USP17L22D6RA61 530 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 USP17L23D6RBM5 183 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 USP17L17D6RBQ6 530 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 USP17L19D6RCP7 530 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 USP17L20D6RJB6 530 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 E9PQ18 207 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 CBX4O00257 560 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 PODXLO00592 558 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 TNFRSF10BO14763 440 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 ZNF213O14771 459 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 PHOX2AO14813 284 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 IRF6O14896 467 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 SLC16A5O15375 505 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 ZNF862O60290 1169 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 TRPA1O75762 1119 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 SPDEFO95238 335 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 RASGRP1O95267 797 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 EDN1P05305 212 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 FAM163BP0C2L3 166 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 GLI4P10075 376 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 HAPLN1P10915 354 aaPredicted RBP-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 VDRP11473 427 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 MTHFD1P11586 935 aaKnown RBP-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 ACPPP15309 386 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 ZNF19P17023 458 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 KCNA4P22459 653 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 DDX6P26196 483 aaKnown RBP eCLIP-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 ARRB2P32121 409 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 CLCN1P35523 988 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 CDKN1AP38936 164 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 MLH1P40692 756 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 OPRD1P41143 372 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 STAT5AP42229 794 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 CLCN5P51795 746 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 RRADP55042 308 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 PCBP3P57721 371 aaKnown RBP-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 LOXL3P58215 753 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 ERVK-24P63145 666 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 NKX3-2P78367 333 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 USP17L24Q0WX57 530 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 USP4Q13107 963 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 ENPP2Q13822 863 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 NFYCQ13952 458 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 NAA30Q147X3 362 aaPredicted RBP-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 ADRM1Q16186 407 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 TBR1Q16650 682 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 CLEC16AQ2KHT3 1053 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 KIF4BQ2VIQ3 1234 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 BEAN1Q3B7T3 259 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 TFDP3Q5H9I0 405 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 TBCELQ5QJ74 424 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 C10orf25Q5T742 122 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 TEDDM1Q5T9Z0 273 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 SERTAD4-AS1Q5TG53 156 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 C1QL3Q5VWW1 255 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 PLA2G4FQ68DD2 849 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 FAAP20Q6NZ36 180 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 MIS18BP1Q6P0N0 1132 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 ARHGAP11AQ6P4F7 1023 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 IGFL1Q6UW32 110 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 H1FNTQ75WM6 255 aaPredicted RBP-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 TRMT1LQ7Z2T5 733 aaKnown RBP-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 C16orf82Q7Z2V1 217 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 ARMC9Q7Z3E5 817 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 ZSCAN2Q7Z7L9 614 aaPredicted RBP-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 PIP4P1Q86T03 277 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 CABP7Q86V35 215 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 MORC1Q86VD1 984 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 NLRP13Q86W25 1043 aa-0.74□□□□□ -2.53
CDKL5-210ENST00000636046 FAM72BQ86X60 149 aa-0.74□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms