RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 SLC39A2Q9NP94 309 aa10.63□□□□□ -0.71
LINC00339-210ENST00000635675 TOPORSQ9NS56 1045 aaPredicted RBP10.63□□□□□ -0.71
LINC00339-210ENST00000635675 LZTS1Q9Y250 596 aa10.63□□□□□ -0.71
LINC00339-210ENST00000635675 MYO7AQ13402 2215 aa10.63□□□□□ -0.71
LINC00339-210ENST00000635675 PLXNA4Q9HCM2 1894 aa10.62□□□□□ -0.71
LINC00339-210ENST00000635675 NRP1O14786 923 aa10.62□□□□□ -0.71
LINC00339-210ENST00000635675 PRPF40AO75400 957 aaKnown RBP10.62□□□□□ -0.71
LINC00339-210ENST00000635675 RPN1P04843 607 aaKnown RBP10.62□□□□□ -0.71
LINC00339-210ENST00000635675 THP07101 528 aa10.62□□□□□ -0.71
LINC00339-210ENST00000635675 ADRB2P07550 413 aa10.62□□□□□ -0.71
LINC00339-210ENST00000635675 KCNE1P15382 129 aa10.62□□□□□ -0.71
LINC00339-210ENST00000635675 TNFSF9P41273 254 aa10.62□□□□□ -0.71
LINC00339-210ENST00000635675 KRT17Q04695 432 aa10.62□□□□□ -0.71
LINC00339-210ENST00000635675 STK4Q13043 487 aa10.62□□□□□ -0.71
LINC00339-210ENST00000635675 TUSC3Q13454 348 aa10.62□□□□□ -0.71
LINC00339-210ENST00000635675 POSTNQ15063 836 aa10.62□□□□□ -0.71
LINC00339-210ENST00000635675 PTPROQ16827 1216 aa10.62□□□□□ -0.71
LINC00339-210ENST00000635675 BMT2Q1RMZ1 405 aa10.62□□□□□ -0.71
LINC00339-210ENST00000635675 ELOA2Q8IYF1 753 aaPredicted RBP10.62□□□□□ -0.71
LINC00339-210ENST00000635675 SYCP3Q8IZU3 236 aa10.62□□□□□ -0.71
LINC00339-210ENST00000635675 MAFAQ8NHW3 353 aaPredicted RBP10.62□□□□□ -0.71
LINC00339-210ENST00000635675 BCL7CQ8WUZ0 217 aaPredicted RBP10.62□□□□□ -0.71
LINC00339-210ENST00000635675 POF1BQ8WVV4 589 aa10.62□□□□□ -0.71
LINC00339-210ENST00000635675 CCDC34Q96HJ3 373 aa10.62□□□□□ -0.71
LINC00339-210ENST00000635675 IGSF21Q96ID5 467 aa10.62□□□□□ -0.71
LINC00339-210ENST00000635675 SNX27Q96L92 541 aa10.62□□□□□ -0.71
LINC00339-210ENST00000635675 ZMAT2Q96NC0 199 aaKnown RBP10.62□□□□□ -0.71
LINC00339-210ENST00000635675 EXOC1Q9NV70 894 aa10.62□□□□□ -0.71
LINC00339-210ENST00000635675 CNTN3Q9P232 1028 aa10.62□□□□□ -0.71
LINC00339-210ENST00000635675 CPSF3Q9UKF6 684 aaKnown RBP10.62□□□□□ -0.71
LINC00339-210ENST00000635675 FAN1Q9Y2M0 1017 aa10.62□□□□□ -0.71
LINC00339-210ENST00000635675 CITO14578 2027 aa10.62□□□□□ -0.71
LINC00339-210ENST00000635675 TTC26A0AVF1 554 aa10.61□□□□□ -0.71
LINC00339-210ENST00000635675 TGFB1I1O43294 461 aa10.61□□□□□ -0.71
LINC00339-210ENST00000635675 RHOBTB3O94955 611 aa10.61□□□□□ -0.71
LINC00339-210ENST00000635675 EFEMP2O95967 443 aa10.61□□□□□ -0.71
LINC00339-210ENST00000635675 GARTP22102 1010 aa10.61□□□□□ -0.71
LINC00339-210ENST00000635675 ERVFC1P60507 584 aa10.61□□□□□ -0.71
LINC00339-210ENST00000635675 UBE2HP62256 183 aa10.61□□□□□ -0.71
LINC00339-210ENST00000635675 PNOCQ13519 176 aa10.61□□□□□ -0.71
LINC00339-210ENST00000635675 KCNB1Q14721 858 aa10.61□□□□□ -0.71
LINC00339-210ENST00000635675 ENOX2Q16206 610 aaKnown RBP10.61□□□□□ -0.71
LINC00339-210ENST00000635675 GLRA4Q5JXX5 417 aa10.61□□□□□ -0.71
LINC00339-210ENST00000635675 CRELD2Q6UXH1 353 aaPredicted RBP10.61□□□□□ -0.71
LINC00339-210ENST00000635675 DDX53Q86TM3 631 aaKnown RBP10.61□□□□□ -0.71
LINC00339-210ENST00000635675 KIAA0895Q8NCT3 520 aa10.61□□□□□ -0.71
LINC00339-210ENST00000635675 POMGNT1Q8WZA1 660 aa10.61□□□□□ -0.71
LINC00339-210ENST00000635675 TMEM169Q96HH4 297 aa10.61□□□□□ -0.71
LINC00339-210ENST00000635675 PLEKHA5Q9HAU0 1116 aa10.61□□□□□ -0.71
LINC00339-210ENST00000635675 PUF60Q9UHX1 559 aaKnown RBP10.61□□□□□ -0.71
LINC00339-210ENST00000635675 AGO2Q9UKV8 859 aaKnown RBP10.61□□□□□ -0.71
LINC00339-210ENST00000635675 UBE4BO95155 1302 aa10.61□□□□□ -0.71
LINC00339-210ENST00000635675 F8W810 466 aa10.6□□□□□ -0.71
LINC00339-210ENST00000635675 FSCN2O14926 492 aa10.6□□□□□ -0.71
LINC00339-210ENST00000635675 CXCL8P10145 99 aa10.6□□□□□ -0.71
LINC00339-210ENST00000635675 IRS1P35568 1242 aa10.6□□□□□ -0.71
LINC00339-210ENST00000635675 OR1G1P47890 313 aa10.6□□□□□ -0.71
LINC00339-210ENST00000635675 ACOT2P49753 483 aa10.6□□□□□ -0.71
LINC00339-210ENST00000635675 POU5F1Q01860 360 aaKnown RBP10.6□□□□□ -0.71
LINC00339-210ENST00000635675 CCDC85BQ15834 202 aaPredicted RBP10.6□□□□□ -0.71
LINC00339-210ENST00000635675 ZBTB6Q15916 424 aa10.6□□□□□ -0.71
LINC00339-210ENST00000635675 SPATA20Q8TB22 786 aa10.6□□□□□ -0.71
LINC00339-210ENST00000635675 PAAF1Q9BRP4 392 aa10.6□□□□□ -0.71
LINC00339-210ENST00000635675 CBWD1Q9BRT8 395 aa10.6□□□□□ -0.71
LINC00339-210ENST00000635675 COLEC11Q9BWP8 271 aa10.6□□□□□ -0.71
LINC00339-210ENST00000635675 VN1R3Q9BXE9 311 aa10.6□□□□□ -0.71
LINC00339-210ENST00000635675 RPF1Q9H9Y2 349 aaKnown RBP10.6□□□□□ -0.71
LINC00339-210ENST00000635675 TLR9Q9NR96 1032 aa10.6□□□□□ -0.71
LINC00339-210ENST00000635675 MARCH5Q9NX47 278 aa10.6□□□□□ -0.71
LINC00339-210ENST00000635675 CACNG4Q9UBN1 327 aa10.6□□□□□ -0.71
LINC00339-210ENST00000635675 PRG3Q9Y2Y8 225 aaPredicted RBP10.6□□□□□ -0.71
LINC00339-210ENST00000635675 ATG2AQ2TAZ0 1938 aa10.6□□□□□ -0.71
LINC00339-210ENST00000635675 CASTOR2A6NHX0 329 aa10.59□□□□□ -0.71
LINC00339-210ENST00000635675 LACTBL1A8MY62 500 aa10.59□□□□□ -0.71
LINC00339-210ENST00000635675 KINO60870 393 aaKnown RBP10.59□□□□□ -0.71
LINC00339-210ENST00000635675 SNRPFP62306 86 aaKnown RBP10.59□□□□□ -0.71
LINC00339-210ENST00000635675 SOX4Q06945 474 aaPredicted RBP10.59□□□□□ -0.71
LINC00339-210ENST00000635675 KNOP1Q1ED39 458 aaKnown RBP10.59□□□□□ -0.71
LINC00339-210ENST00000635675 TIGD5Q53EQ6 642 aa10.59□□□□□ -0.71
LINC00339-210ENST00000635675 PDE12Q6L8Q7 609 aaKnown RBP10.59□□□□□ -0.71
LINC00339-210ENST00000635675 CD302Q8IX05 232 aa10.59□□□□□ -0.71
LINC00339-210ENST00000635675 NELFCDQ8IXH7 590 aa10.59□□□□□ -0.71
LINC00339-210ENST00000635675 MICALL1Q8N3F8 863 aa10.59□□□□□ -0.71
LINC00339-210ENST00000635675 ZSWIM2Q8NEG5 633 aa10.59□□□□□ -0.71
LINC00339-210ENST00000635675 PPM1EQ8WY54 764 aa10.59□□□□□ -0.71
LINC00339-210ENST00000635675 RABGGTAQ92696 567 aa10.59□□□□□ -0.71
LINC00339-210ENST00000635675 CCDC47Q96A33 483 aaKnown RBP10.59□□□□□ -0.71
LINC00339-210ENST00000635675 GSDMAQ96QA5 445 aa10.59□□□□□ -0.71
LINC00339-210ENST00000635675 TSPAN18Q96SJ8 248 aa10.59□□□□□ -0.71
LINC00339-210ENST00000635675 NSUN3Q9H649 340 aaKnown RBP10.59□□□□□ -0.71
LINC00339-210ENST00000635675 AGPAT3Q9NRZ7 376 aa10.59□□□□□ -0.71
LINC00339-210ENST00000635675 SLC38A7Q9NVC3 462 aa10.59□□□□□ -0.71
LINC00339-210ENST00000635675 PCDHGC5Q9Y5F6 944 aa10.59□□□□□ -0.71
LINC00339-210ENST00000635675 PCDHA5Q9Y5H7 936 aa10.59□□□□□ -0.71
LINC00339-210ENST00000635675 PDCD11Q14690 1871 aaKnown RBP10.59□□□□□ -0.71
LINC00339-210ENST00000635675 KIAA0391O15091 583 aaKnown RBP10.58□□□□□ -0.72
LINC00339-210ENST00000635675 EXTL3O43909 919 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 LDHAP00338 332 aaKnown RBP10.58□□□□□ -0.72
LINC00339-210ENST00000635675 IGFBP6P24592 240 aaPredicted RBP10.58□□□□□ -0.72
LINC00339-210ENST00000635675 CLCNKBP51801 687 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms