RNA–Protein interactions for RNA: ENST00000635227.1

LINC01108-202, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 3 BASIC

Gene LINC01108, Length 776 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-202ENST00000635227 ZMAT1Q5H9K5 638 aa8.72□□□□□ -1.01
LINC01108-202ENST00000635227 CCDC62Q6P9F0 684 aa8.72□□□□□ -1.01
LINC01108-202ENST00000635227 ARHGEF18Q6ZSZ5 1173 aa8.72□□□□□ -1.01
LINC01108-202ENST00000635227 ARHGAP45Q92619 1136 aa8.72□□□□□ -1.01
LINC01108-202ENST00000635227 NKD2Q969F2 451 aaPredicted RBP8.72□□□□□ -1.01
LINC01108-202ENST00000635227 NOL10Q9BSC4 688 aaKnown RBP8.72□□□□□ -1.01
LINC01108-202ENST00000635227 KRTAP9-9Q9BYP9 154 aa8.72□□□□□ -1.01
LINC01108-202ENST00000635227 KRTAP9-4Q9BYQ2 154 aa8.72□□□□□ -1.01
LINC01108-202ENST00000635227 PRDM12Q9H4Q4 367 aa8.72□□□□□ -1.01
LINC01108-202ENST00000635227 DNAI1Q9UI46 699 aa8.72□□□□□ -1.01
LINC01108-202ENST00000635227 TMPRSS11EQ9UL52 423 aa8.72□□□□□ -1.01
LINC01108-202ENST00000635227 FAM184BQ9ULE4 1060 aa8.72□□□□□ -1.01
LINC01108-202ENST00000635227 NOP58Q9Y2X3 529 aaKnown RBP8.72□□□□□ -1.01
LINC01108-202ENST00000635227 A0A0A6YYK5 440 aaPredicted RBP8.71□□□□□ -1.02
LINC01108-202ENST00000635227 LAMTOR5O43504 91 aa8.71□□□□□ -1.02
LINC01108-202ENST00000635227 CDK11BP21127 795 aaKnown RBP8.71□□□□□ -1.02
LINC01108-202ENST00000635227 EIF4A2Q14240 407 aaKnown RBP8.71□□□□□ -1.02
LINC01108-202ENST00000635227 PTPROQ16827 1216 aa8.71□□□□□ -1.02
LINC01108-202ENST00000635227 CT83Q5H943 113 aa8.71□□□□□ -1.02
LINC01108-202ENST00000635227 LYSMD2Q8IV50 215 aa8.71□□□□□ -1.02
LINC01108-202ENST00000635227 ITPRIPQ8IWB1 547 aa8.71□□□□□ -1.02
LINC01108-202ENST00000635227 SOX7Q9BT81 388 aa8.71□□□□□ -1.02
LINC01108-202ENST00000635227 POLR3BQ9NW08 1133 aaPredicted RBP8.71□□□□□ -1.02
LINC01108-202ENST00000635227 KCNG1Q9UIX4 513 aa8.71□□□□□ -1.02
LINC01108-202ENST00000635227 LAS1LQ9Y4W2 734 aaKnown RBP8.71□□□□□ -1.02
LINC01108-202ENST00000635227 LMO7Q8WWI1 1683 aa8.71□□□□□ -1.02
LINC01108-202ENST00000635227 KDRP35968 1356 aa8.71□□□□□ -1.02
LINC01108-202ENST00000635227 TRPM3Q9HCF6 1732 aaPredicted RBP8.71□□□□□ -1.02
LINC01108-202ENST00000635227 RGPD3A6NKT7 1758 aaPredicted RBP8.71□□□□□ -1.02
LINC01108-202ENST00000635227 RGPD4Q7Z3J3 1758 aa8.71□□□□□ -1.02
LINC01108-202ENST00000635227 CELA3BP08861 270 aa8.7□□□□□ -1.02
LINC01108-202ENST00000635227 EPHB4P54760 987 aa8.7□□□□□ -1.02
LINC01108-202ENST00000635227 EVA1CP58658 441 aa8.7□□□□□ -1.02
LINC01108-202ENST00000635227 TRIM25Q14258 630 aaKnown RBP8.7□□□□□ -1.02
LINC01108-202ENST00000635227 SURF1Q15526 300 aa8.7□□□□□ -1.02
LINC01108-202ENST00000635227 PITRM1Q5JRX3 1037 aa8.7□□□□□ -1.02
LINC01108-202ENST00000635227 KLHDC10Q6PID8 442 aa8.7□□□□□ -1.02
LINC01108-202ENST00000635227 USP30Q70CQ3 517 aa8.7□□□□□ -1.02
LINC01108-202ENST00000635227 KRT28Q7Z3Y7 464 aa8.7□□□□□ -1.02
LINC01108-202ENST00000635227 PRPF38AQ8NAV1 312 aaKnown RBP8.7□□□□□ -1.02
LINC01108-202ENST00000635227 SSH1Q8WYL5 1049 aa8.7□□□□□ -1.02
LINC01108-202ENST00000635227 TRIM8Q9BZR9 551 aa8.7□□□□□ -1.02
LINC01108-202ENST00000635227 API5Q9BZZ5 524 aaKnown RBP8.7□□□□□ -1.02
LINC01108-202ENST00000635227 OR10A2Q9H208 303 aa8.7□□□□□ -1.02
LINC01108-202ENST00000635227 UPF2Q9HAU5 1272 aaKnown RBP8.7□□□□□ -1.02
LINC01108-202ENST00000635227 C14orf119Q9NWQ9 140 aa8.7□□□□□ -1.02
LINC01108-202ENST00000635227 SLC5A4Q9NY91 659 aa8.7□□□□□ -1.02
LINC01108-202ENST00000635227 USP18Q9UMW8 372 aa8.7□□□□□ -1.02
LINC01108-202ENST00000635227 VWA7Q9Y334 891 aa8.7□□□□□ -1.02
LINC01108-202ENST00000635227 PCDHB6Q9Y5E3 794 aa8.7□□□□□ -1.02
LINC01108-202ENST00000635227 NUMBLQ9Y6R0 609 aa8.7□□□□□ -1.02
LINC01108-202ENST00000635227 ZNF536O15090 1300 aa8.7□□□□□ -1.02
LINC01108-202ENST00000635227 SOS1Q07889 1333 aaPredicted RBP8.7□□□□□ -1.02
LINC01108-202ENST00000635227 SPATA31A3Q5VYP0 1347 aa8.7□□□□□ -1.02
LINC01108-202ENST00000635227 KIAA0232Q92628 1395 aa8.7□□□□□ -1.02
LINC01108-202ENST00000635227 SLIT3O75094 1523 aa8.7□□□□□ -1.02
LINC01108-202ENST00000635227 NFAT5O94916 1531 aa8.7□□□□□ -1.02
LINC01108-202ENST00000635227 ALS2Q96Q42 1657 aa8.69□□□□□ -1.02
LINC01108-202ENST00000635227 ABCA3Q99758 1704 aa8.69□□□□□ -1.02
LINC01108-202ENST00000635227 HTATSF1O43719 755 aaKnown RBP8.69□□□□□ -1.02
LINC01108-202ENST00000635227 EIF5BO60841 1220 aaKnown RBP8.69□□□□□ -1.02
LINC01108-202ENST00000635227 PLATP00750 562 aa8.69□□□□□ -1.02
LINC01108-202ENST00000635227 LPLP06858 475 aa8.69□□□□□ -1.02
LINC01108-202ENST00000635227 TRIM27P14373 513 aa8.69□□□□□ -1.02
LINC01108-202ENST00000635227 SCAND1P57086 179 aa8.69□□□□□ -1.02
LINC01108-202ENST00000635227 TWISTNBQ3B726 338 aaPredicted RBP8.69□□□□□ -1.02
LINC01108-202ENST00000635227 ZNF568Q3ZCX4 644 aa8.69□□□□□ -1.02
LINC01108-202ENST00000635227 SULT6B1Q6IMI4 303 aa8.69□□□□□ -1.02
LINC01108-202ENST00000635227 KCNH5Q8NCM2 988 aa8.69□□□□□ -1.02
LINC01108-202ENST00000635227 OR14K1Q8NGZ2 314 aa8.69□□□□□ -1.02
LINC01108-202ENST00000635227 EAF2Q96CJ1 260 aaPredicted RBP8.69□□□□□ -1.02
LINC01108-202ENST00000635227 AHCYL2Q96HN2 611 aaKnown RBP8.69□□□□□ -1.02
LINC01108-202ENST00000635227 WDR92Q96MX6 357 aa8.69□□□□□ -1.02
LINC01108-202ENST00000635227 CHMP4AQ9BY43 222 aa8.69□□□□□ -1.02
LINC01108-202ENST00000635227 MEGF9Q9H1U4 602 aa8.69□□□□□ -1.02
LINC01108-202ENST00000635227 JADE2Q9NQC1 790 aa8.69□□□□□ -1.02
LINC01108-202ENST00000635227 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.69□□□□□ -1.02
LINC01108-202ENST00000635227 PPP4R1LQ9P1A2 415 aa8.69□□□□□ -1.02
LINC01108-202ENST00000635227 NR2E1Q9Y466 385 aa8.69□□□□□ -1.02
LINC01108-202ENST00000635227 MAP3K19Q56UN5 1328 aa8.69□□□□□ -1.02
LINC01108-202ENST00000635227 TNS3Q68CZ2 1445 aa8.69□□□□□ -1.02
LINC01108-202ENST00000635227 ABCC6O95255 1503 aa8.69□□□□□ -1.02
LINC01108-202ENST00000635227 NRAPQ86VF7 1730 aa8.68□□□□□ -1.02
LINC01108-202ENST00000635227 GOLGA8AA7E2F4 631 aa8.68□□□□□ -1.02
LINC01108-202ENST00000635227 GOLGA8BA8MQT2 603 aa8.68□□□□□ -1.02
LINC01108-202ENST00000635227 MATN2O00339 956 aa8.68□□□□□ -1.02
LINC01108-202ENST00000635227 MAFGO15525 162 aa8.68□□□□□ -1.02
LINC01108-202ENST00000635227 ARHGAP6O43182 974 aa8.68□□□□□ -1.02
LINC01108-202ENST00000635227 ZNF853P0CG23 659 aa8.68□□□□□ -1.02
LINC01108-202ENST00000635227 HNRNPLP14866 589 aaKnown RBP eCLIP8.68□□□□□ -1.02
LINC01108-202ENST00000635227 HDAC1Q13547 482 aaPredicted RBP8.68□□□□□ -1.02
LINC01108-202ENST00000635227 NFYCQ13952 458 aa8.68□□□□□ -1.02
LINC01108-202ENST00000635227 ACAP1Q15027 740 aa8.68□□□□□ -1.02
LINC01108-202ENST00000635227 FSCN1Q16658 493 aaKnown RBP8.68□□□□□ -1.02
LINC01108-202ENST00000635227 CDYL2Q8N8U2 506 aa8.68□□□□□ -1.02
LINC01108-202ENST00000635227 TGFBRAP1Q8WUH2 860 aa8.68□□□□□ -1.02
LINC01108-202ENST00000635227 LMBR1Q8WVP7 490 aa8.68□□□□□ -1.02
LINC01108-202ENST00000635227 NEIL1Q96FI4 390 aaPredicted RBP8.68□□□□□ -1.02
LINC01108-202ENST00000635227 HIST1H2AHQ96KK5 128 aa8.68□□□□□ -1.02
LINC01108-202ENST00000635227 HIST1H2AJQ99878 128 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms