RNA–Protein interactions for RNA: ENST00000628734.1

UBE2A-208, Transcript of ubiquitin conjugating enzyme E2 A, human

TSL 2

Gene UBE2A, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2A-208	ENST00000628734	GPR101	Q96P66	508 aa	Predicted RBP	4.57	□□□□□ -1.68
UBE2A-208	ENST00000628734	FAM193B	Q96PV7	902 aa	Predicted RBP	4.57	□□□□□ -1.68
UBE2A-208	ENST00000628734	FEZ1	Q99689	392 aa		4.57	□□□□□ -1.68
UBE2A-208	ENST00000628734	PDCL3	Q9H2J4	239 aa		4.57	□□□□□ -1.68
UBE2A-208	ENST00000628734	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	4.57	□□□□□ -1.68
UBE2A-208	ENST00000628734	EMC7	Q9NPA0	242 aa		4.57	□□□□□ -1.68
UBE2A-208	ENST00000628734	SYBU	Q9NX95	663 aa		4.57	□□□□□ -1.68
UBE2A-208	ENST00000628734	FRMD4B	Q9Y2L6	1034 aa		4.57	□□□□□ -1.68
UBE2A-208	ENST00000628734	COL11A2	P13942	1736 aa	Predicted RBP	4.57	□□□□□ -1.68
UBE2A-208	ENST00000628734	MARCH11	A6NNE9	402 aa		4.56	□□□□□ -1.68
UBE2A-208	ENST00000628734	PRR5-ARHGAP8	B1AHC4	643 aa		4.56	□□□□□ -1.68
UBE2A-208	ENST00000628734	RNASET2	O00584	256 aa	Known RBP	4.56	□□□□□ -1.68
UBE2A-208	ENST00000628734	NCR1	O76036	304 aa		4.56	□□□□□ -1.68
UBE2A-208	ENST00000628734	FKBP9	O95302	570 aa		4.56	□□□□□ -1.68
UBE2A-208	ENST00000628734	BMPR1A	P36894	532 aa		4.56	□□□□□ -1.68
UBE2A-208	ENST00000628734	SART3	Q15020	963 aa	Known RBP	4.56	□□□□□ -1.68
UBE2A-208	ENST00000628734	DALRD3	Q5D0E6	543 aa	Known RBP	4.56	□□□□□ -1.68
UBE2A-208	ENST00000628734	OLFML1	Q6UWY5	402 aa		4.56	□□□□□ -1.68
UBE2A-208	ENST00000628734	FKBP9P1	Q75LS8	142 aa		4.56	□□□□□ -1.68
UBE2A-208	ENST00000628734	SMC5	Q8IY18	1101 aa		4.56	□□□□□ -1.68
UBE2A-208	ENST00000628734	OR2W6P	Q8NHA6	318 aa		4.56	□□□□□ -1.68
UBE2A-208	ENST00000628734	SNX33	Q8WV41	574 aa		4.56	□□□□□ -1.68
UBE2A-208	ENST00000628734	MFSD3	Q96ES6	412 aa		4.56	□□□□□ -1.68
UBE2A-208	ENST00000628734	MAF1	Q9H063	256 aa		4.56	□□□□□ -1.68
UBE2A-208	ENST00000628734	SERHL2	Q9H4I8	314 aa		4.56	□□□□□ -1.68
UBE2A-208	ENST00000628734	PRDM13	Q9H4Q3	707 aa		4.56	□□□□□ -1.68
UBE2A-208	ENST00000628734	PRDM12	Q9H4Q4	367 aa		4.56	□□□□□ -1.68
UBE2A-208	ENST00000628734	METTL14	Q9HCE5	456 aa	Known RBP	4.56	□□□□□ -1.68
UBE2A-208	ENST00000628734	AKIP1	Q9NQ31	210 aa		4.56	□□□□□ -1.68
UBE2A-208	ENST00000628734	TRPM5	Q9NZQ8	1165 aa		4.56	□□□□□ -1.68
UBE2A-208	ENST00000628734	KLHL42	Q9P2K6	505 aa		4.56	□□□□□ -1.68
UBE2A-208	ENST00000628734	CDY2A	Q9Y6F7	541 aa		4.56	□□□□□ -1.68
UBE2A-208	ENST00000628734	GSG1L2	A8MUP6	293 aa		4.55	□□□□□ -1.68
UBE2A-208	ENST00000628734	ITGA10	O75578	1167 aa		4.55	□□□□□ -1.68
UBE2A-208	ENST00000628734	GAST	P01350	101 aa		4.55	□□□□□ -1.68
UBE2A-208	ENST00000628734	TYRP1	P17643	537 aa		4.55	□□□□□ -1.68
UBE2A-208	ENST00000628734	MGAT1	P26572	445 aa		4.55	□□□□□ -1.68
UBE2A-208	ENST00000628734	CLK3	P49761	638 aa	Known RBP	4.55	□□□□□ -1.68
UBE2A-208	ENST00000628734	SATB1	Q01826	763 aa		4.55	□□□□□ -1.68
UBE2A-208	ENST00000628734	APBA1	Q02410	837 aa		4.55	□□□□□ -1.68
UBE2A-208	ENST00000628734	SLC20A2	Q08357	652 aa		4.55	□□□□□ -1.68
UBE2A-208	ENST00000628734	ZRSR2	Q15696	482 aa	Known RBP	4.55	□□□□□ -1.68
UBE2A-208	ENST00000628734	DDB1	Q16531	1140 aa		4.55	□□□□□ -1.68
UBE2A-208	ENST00000628734	PITRM1	Q5JRX3	1037 aa		4.55	□□□□□ -1.68
UBE2A-208	ENST00000628734	DNTTIP2	Q5QJE6	756 aa	Known RBP	4.55	□□□□□ -1.68
UBE2A-208	ENST00000628734	BROX	Q5VW32	411 aa		4.55	□□□□□ -1.68
UBE2A-208	ENST00000628734	CCDC62	Q6P9F0	684 aa		4.55	□□□□□ -1.68
UBE2A-208	ENST00000628734	GIMAP6	Q6P9H5	292 aa		4.55	□□□□□ -1.68
UBE2A-208	ENST00000628734	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	4.55	□□□□□ -1.68
UBE2A-208	ENST00000628734	C11orf74	Q86VG3	221 aa		4.55	□□□□□ -1.68
UBE2A-208	ENST00000628734	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	4.55	□□□□□ -1.68
UBE2A-208	ENST00000628734	ZCRB1	Q8TBF4	217 aa	Known RBP	4.55	□□□□□ -1.68
UBE2A-208	ENST00000628734	PMM1	Q92871	262 aa		4.55	□□□□□ -1.68
UBE2A-208	ENST00000628734	PAWR	Q96IZ0	340 aa	Known RBP	4.55	□□□□□ -1.68
UBE2A-208	ENST00000628734	R3HDML	Q9H3Y0	253 aa		4.55	□□□□□ -1.68
UBE2A-208	ENST00000628734	ZMYM3	Q14202	1370 aa		4.54	□□□□□ -1.68
UBE2A-208	ENST00000628734	TBKBP1	A7MCY6	615 aa		4.54	□□□□□ -1.68
UBE2A-208	ENST00000628734	PRAMEF4	O60810	478 aa		4.54	□□□□□ -1.68
UBE2A-208	ENST00000628734	CDC45	O75419	566 aa		4.54	□□□□□ -1.68
UBE2A-208	ENST00000628734	CTSS	P25774	331 aa		4.54	□□□□□ -1.68
UBE2A-208	ENST00000628734	CTGF	P29279	349 aa		4.54	□□□□□ -1.68
UBE2A-208	ENST00000628734	IL2	P60568	153 aa		4.54	□□□□□ -1.68
UBE2A-208	ENST00000628734	NHLH2	Q02577	135 aa		4.54	□□□□□ -1.68
UBE2A-208	ENST00000628734	BMT2	Q1RMZ1	405 aa		4.54	□□□□□ -1.68
UBE2A-208	ENST00000628734	ANKS6	Q68DC2	871 aa		4.54	□□□□□ -1.68
UBE2A-208	ENST00000628734	ABHD15	Q6UXT9	468 aa		4.54	□□□□□ -1.68
UBE2A-208	ENST00000628734	MICALCL	Q6ZW33	695 aa		4.54	□□□□□ -1.68
UBE2A-208	ENST00000628734	RD3	Q7Z3Z2	195 aa		4.54	□□□□□ -1.68
UBE2A-208	ENST00000628734	RASSF3	Q86WH2	238 aa		4.54	□□□□□ -1.68
UBE2A-208	ENST00000628734	OR10H5	Q8NGA6	315 aa		4.54	□□□□□ -1.68
UBE2A-208	ENST00000628734	LINC00476	Q8WZB0	136 aa		4.54	□□□□□ -1.68
UBE2A-208	ENST00000628734	SLC5A5	Q92911	643 aa		4.54	□□□□□ -1.68
UBE2A-208	ENST00000628734	COQ10A	Q96MF6	247 aa		4.54	□□□□□ -1.68
UBE2A-208	ENST00000628734	CDC5L	Q99459	802 aa	Known RBP	4.54	□□□□□ -1.68
UBE2A-208	ENST00000628734	TEX101	Q9BY14	249 aa		4.54	□□□□□ -1.68
UBE2A-208	ENST00000628734	ANO3	Q9BYT9	981 aa		4.54	□□□□□ -1.68
UBE2A-208	ENST00000628734	KCTD10	Q9H3F6	313 aa		4.54	□□□□□ -1.68
UBE2A-208	ENST00000628734	CYP4F11	Q9HBI6	524 aa		4.54	□□□□□ -1.68
UBE2A-208	ENST00000628734	RBM28	Q9NW13	759 aa	Known RBP	4.54	□□□□□ -1.68
UBE2A-208	ENST00000628734	GPRC5D	Q9NZD1	345 aa		4.54	□□□□□ -1.68
UBE2A-208	ENST00000628734		A0A087X0B3	334 aa		4.53	□□□□□ -1.68
UBE2A-208	ENST00000628734	ZNF185	O15231	689 aa		4.53	□□□□□ -1.68
UBE2A-208	ENST00000628734	CLEC2L	P0C7M8	214 aa		4.53	□□□□□ -1.68
UBE2A-208	ENST00000628734	BPI	P17213	487 aa		4.53	□□□□□ -1.68
UBE2A-208	ENST00000628734	CRHR1	P34998	444 aa		4.53	□□□□□ -1.68
UBE2A-208	ENST00000628734	RNASE9	P60153	205 aa	Known RBP	4.53	□□□□□ -1.68
UBE2A-208	ENST00000628734	MST1L	Q2TV78	715 aa		4.53	□□□□□ -1.68
UBE2A-208	ENST00000628734	FAM102A	Q5T9C2	384 aa	Predicted RBP	4.53	□□□□□ -1.68
UBE2A-208	ENST00000628734	METRNL	Q641Q3	311 aa		4.53	□□□□□ -1.68
UBE2A-208	ENST00000628734	ADAM2	Q99965	735 aa		4.53	□□□□□ -1.68
UBE2A-208	ENST00000628734	BRIP1	Q9BX63	1249 aa		4.53	□□□□□ -1.68
UBE2A-208	ENST00000628734	WDR11	Q9BZH6	1224 aa		4.53	□□□□□ -1.68
UBE2A-208	ENST00000628734	ALG13	Q9NP73	1137 aa	Known RBP	4.53	□□□□□ -1.68
UBE2A-208	ENST00000628734	ANKFY1	Q9P2R3	1169 aa		4.53	□□□□□ -1.68
UBE2A-208	ENST00000628734	MRPL42	Q9Y6G3	142 aa	Known RBP	4.53	□□□□□ -1.68
UBE2A-208	ENST00000628734	COX11	Q9Y6N1	276 aa		4.53	□□□□□ -1.68
UBE2A-208	ENST00000628734	WASHC2A	Q641Q2	1341 aa		4.52	□□□□□ -1.69
UBE2A-208	ENST00000628734	IPO8	O15397	1037 aa	Known RBP	4.52	□□□□□ -1.69
UBE2A-208	ENST00000628734	PJA2	O43164	708 aa		4.52	□□□□□ -1.69
UBE2A-208	ENST00000628734	PARN	O95453	639 aa	Known RBP	4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms