RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 A0A1B0GUA9 196 aa8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 SOWAHDA6NJG2 315 aa8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 TULP1O00294 542 aaPredicted RBP8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 FAM189A1O60320 539 aa8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 TSPAN1O60635 241 aa8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 ZC3H11AO75152 810 aaKnown RBP eCLIP8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 SERPING1P05155 500 aa8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 CLTAP09496 248 aa8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 CCDC172P0C7W6 258 aa8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 SIP14410 1827 aa8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 ARF4P18085 180 aaPredicted RBP8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 TNNI1P19237 187 aa8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 EIF4BP23588 611 aaKnown RBP8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 CLCN1P35523 988 aa8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 ZNF200P98182 395 aaPredicted RBP8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 HIC1Q14526 733 aa8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 ASIC2Q16515 512 aa8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 DCAF4L1Q3SXM0 396 aa8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 SLC9C1Q4G0N8 1177 aa8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 FAM47CQ5HY64 1035 aa8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 E4F1Q66K89 784 aaPredicted RBP8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 FBXO46Q6PJ61 603 aaPredicted RBP8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 WDR59Q6PJI9 974 aa8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 C15orf39Q6ZRI6 1047 aa8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 CATSPER4Q7RTX7 472 aa8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 WDR49Q8IV35 697 aa8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 EFCAB3Q8N7B9 438 aa8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 ARRDC4Q8NCT1 418 aa8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 FBXL13Q8NEE6 735 aa8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 LMO3Q8TAP4 145 aa8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 OSMRQ99650 979 aa8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 SEZ6LQ9BYH1 1024 aa8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 STK33Q9BYT3 514 aa8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 CDT1Q9H211 546 aa8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 RPF1Q9H9Y2 349 aaKnown RBP8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 PDE11AQ9HCR9 933 aa8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 SIX2Q9NPC8 291 aa8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 NLRC4Q9NPP4 1024 aa8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 RAB20Q9NX57 234 aa8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 AIPL1Q9NZN9 384 aa8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 APEX2Q9UBZ4 518 aa8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 FHOD1Q9Y613 1164 aa8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 PTCH2Q9Y6C5 1203 aa8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 BZW2Q9Y6E2 419 aaKnown RBP8.16□□□□□ -1.1
PTP4A1-206ENST00000627002 MYH11P35749 1972 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 SSU72P8A0A1W2PR75 194 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 B4GALT4O60513 344 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 CSDE1O75534 798 aaKnown RBP8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 NDUFA10O95299 355 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 IPO7O95373 1038 aaKnown RBP8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 C4BPAP04003 597 aaKnown RBP8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 TUBB4AP04350 444 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 CCDC175P0C221 793 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 ANXA13P27216 316 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 TNFSF9P41273 254 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 STAT1P42224 750 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 ACLYP53396 1101 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 MFAP3P55082 362 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 JAM2P57087 298 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 KRT83P78385 493 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 MRPS6P82932 125 aaKnown RBP8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 TMEM62Q0P6H9 643 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 ITGA7Q13683 1181 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 RAPGEF1Q13905 1077 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 SNX17Q15036 470 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 DUOXA2Q1HG44 320 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 ZACNQ401N2 412 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 WDR44Q5JSH3 913 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 ZBTB41Q5SVQ8 909 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 EEF1DP3Q658K8 133 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 SMYD5Q6GMV2 418 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 IQCEQ6IPM2 695 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 GDF6Q6KF10 455 aaPredicted RBP8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 NOTUMQ6P988 496 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 SLC27A1Q6PCB7 646 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 RAD9BQ6WBX8 426 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 TOGARAM2Q6ZUX3 1019 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 SV2AQ7L0J3 742 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 ENOSF1Q7L5Y1 443 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 SERINC5Q86VE9 423 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 CD302Q8IX05 232 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 THNSL1Q8IYQ7 743 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 TXLNBQ8N3L3 684 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 CPB2Q96IY4 423 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 CCDC42Q96M95 316 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 GLT1D1Q96MS3 346 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 NT5C1BQ96P26 610 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 POP1Q99575 1024 aaKnown RBP8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 CHP1Q99653 195 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 CELF4Q9BZC1 486 aaKnown RBP8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 DEF6Q9H4E7 631 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 NHEJ1Q9H9Q4 299 aaPredicted RBP8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 RRAGDQ9NQL2 400 aaPredicted RBP8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 DNAJC12Q9UKB3 198 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 GINS2Q9Y248 185 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 PTPN22Q9Y2R2 807 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 PPP2R2CQ9Y2T4 447 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 TRPV2Q9Y5S1 764 aa8.15□□□□□ -1.1
PTP4A1-206ENST00000627002 ADGRG1Q9Y653 693 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms