RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 LMBR1Q8WVP7 490 aa21.15■□□□□ 0.98
CHRNA4-209ENST00000627000 PTPN18Q99952 460 aa21.15■□□□□ 0.98
CHRNA4-209ENST00000627000 RNF14Q9UBS8 474 aa21.15■□□□□ 0.98
CHRNA4-209ENST00000627000 CHORDC1Q9UHD1 332 aaPredicted RBP21.15■□□□□ 0.98
CHRNA4-209ENST00000627000 DMGDHQ9UI17 866 aaKnown RBP21.15■□□□□ 0.98
CHRNA4-209ENST00000627000 CELF2O95319 508 aaKnown RBP21.14■□□□□ 0.98
CHRNA4-209ENST00000627000 PRKCBP05771 671 aa21.14■□□□□ 0.98
CHRNA4-209ENST00000627000 TUBBP07437 444 aa21.14■□□□□ 0.98
CHRNA4-209ENST00000627000 ADCYAP1R1P41586 468 aa21.14■□□□□ 0.98
CHRNA4-209ENST00000627000 PIK3CAP42336 1068 aa21.14■□□□□ 0.98
CHRNA4-209ENST00000627000 EFNA5P52803 228 aa21.14■□□□□ 0.98
CHRNA4-209ENST00000627000 SLC7A5Q01650 507 aa21.14■□□□□ 0.98
CHRNA4-209ENST00000627000 MXD4Q14582 209 aaPredicted RBP21.14■□□□□ 0.98
CHRNA4-209ENST00000627000 GSPT2Q8IYD1 628 aaKnown RBP21.14■□□□□ 0.98
CHRNA4-209ENST00000627000 METTL13Q8N6R0 699 aa21.14■□□□□ 0.98
CHRNA4-209ENST00000627000 OR5B17Q8NGF7 314 aa21.14■□□□□ 0.98
CHRNA4-209ENST00000627000 NLRP4Q96MN2 994 aa21.14■□□□□ 0.98
CHRNA4-209ENST00000627000 TCHPQ9BT92 498 aa21.14■□□□□ 0.98
CHRNA4-209ENST00000627000 MRPL4Q9BYD3 311 aaKnown RBP21.14■□□□□ 0.98
CHRNA4-209ENST00000627000 RRAGCQ9HB90 399 aa21.14■□□□□ 0.98
CHRNA4-209ENST00000627000 C1orf112Q9NSG2 853 aa21.14■□□□□ 0.98
CHRNA4-209ENST00000627000 MORF4L1Q9UBU8 362 aa21.14■□□□□ 0.98
CHRNA4-209ENST00000627000 GAS2O43903 313 aaKnown RBP21.14■□□□□ 0.97
CHRNA4-209ENST00000627000 HBP1O60381 514 aa21.14■□□□□ 0.97
CHRNA4-209ENST00000627000 KRT5P13647 590 aa21.14■□□□□ 0.97
CHRNA4-209ENST00000627000 SLC26A2P50443 739 aa21.14■□□□□ 0.97
CHRNA4-209ENST00000627000 IGBP1P78318 339 aa21.14■□□□□ 0.97
CHRNA4-209ENST00000627000 GCNT1Q02742 428 aa21.14■□□□□ 0.97
CHRNA4-209ENST00000627000 EFCAB12Q6NXP0 572 aa21.14■□□□□ 0.97
CHRNA4-209ENST00000627000 CGRRF1Q99675 332 aa21.14■□□□□ 0.97
CHRNA4-209ENST00000627000 ACO2Q99798 780 aaKnown RBP21.14■□□□□ 0.97
CHRNA4-209ENST00000627000 KATNBL1Q9H079 304 aa21.14■□□□□ 0.97
CHRNA4-209ENST00000627000 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.14■□□□□ 0.97
CHRNA4-209ENST00000627000 IVNS1ABPQ9Y6Y0 642 aa21.14■□□□□ 0.97
CHRNA4-209ENST00000627000 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.13■□□□□ 0.97
CHRNA4-209ENST00000627000 FAM189A1O60320 539 aa21.13■□□□□ 0.97
CHRNA4-209ENST00000627000 ZC3H11AO75152 810 aaKnown RBP eCLIP21.13■□□□□ 0.97
CHRNA4-209ENST00000627000 RTN2O75298 545 aa21.13■□□□□ 0.97
CHRNA4-209ENST00000627000 MYBL2P10244 700 aa21.13■□□□□ 0.97
CHRNA4-209ENST00000627000 GCLCP48506 637 aaPredicted RBP21.13■□□□□ 0.97
CHRNA4-209ENST00000627000 SPRYD7Q5W111 196 aa21.13■□□□□ 0.97
CHRNA4-209ENST00000627000 ZBTB8OSQ8IWT0 167 aa21.13■□□□□ 0.97
CHRNA4-209ENST00000627000 SYCE1Q8N0S2 351 aa21.13■□□□□ 0.97
CHRNA4-209ENST00000627000 DDX1Q92499 740 aaKnown RBP21.13■□□□□ 0.97
CHRNA4-209ENST00000627000 ZBTB9Q96C00 473 aa21.13■□□□□ 0.97
CHRNA4-209ENST00000627000 MAP2K7O14733 419 aa21.13■□□□□ 0.97
CHRNA4-209ENST00000627000 TOM1L1O75674 476 aa21.13■□□□□ 0.97
CHRNA4-209ENST00000627000 ECM2O94769 699 aaPredicted RBP21.13■□□□□ 0.97
CHRNA4-209ENST00000627000 SNAI1O95863 264 aaPredicted RBP21.13■□□□□ 0.97
CHRNA4-209ENST00000627000 LGALS2P05162 132 aa21.13■□□□□ 0.97
CHRNA4-209ENST00000627000 PDE6CP51160 858 aa21.13■□□□□ 0.97
CHRNA4-209ENST00000627000 MAPK6Q16659 721 aa21.13■□□□□ 0.97
CHRNA4-209ENST00000627000 GPR142Q7Z601 462 aa21.13■□□□□ 0.97
CHRNA4-209ENST00000627000 APOBEC3GQ9HC16 384 aaKnown RBP21.13■□□□□ 0.97
CHRNA4-209ENST00000627000 ERAP1Q9NZ08 941 aa21.13■□□□□ 0.97
CHRNA4-209ENST00000627000 ABLIM1O14639 778 aa21.12■□□□□ 0.97
CHRNA4-209ENST00000627000 ATMINO43313 823 aaPredicted RBP21.12■□□□□ 0.97
CHRNA4-209ENST00000627000 CEP104O60308 925 aa21.12■□□□□ 0.97
CHRNA4-209ENST00000627000 CDR2Q01850 454 aa21.12■□□□□ 0.97
CHRNA4-209ENST00000627000 LAMC2Q13753 1193 aa21.12■□□□□ 0.97
CHRNA4-209ENST00000627000 WDR44Q5JSH3 913 aa21.12■□□□□ 0.97
CHRNA4-209ENST00000627000 C2orf69Q8N8R5 385 aa21.12■□□□□ 0.97
CHRNA4-209ENST00000627000 AFG1LQ8WV93 481 aa21.12■□□□□ 0.97
CHRNA4-209ENST00000627000 HES6Q96HZ4 224 aa21.12■□□□□ 0.97
CHRNA4-209ENST00000627000 VTA1Q9NP79 307 aa21.12■□□□□ 0.97
CHRNA4-209ENST00000627000 AMFRQ9UKV5 643 aa21.12■□□□□ 0.97
CHRNA4-209ENST00000627000 B4GALT5O43286 388 aa21.12■□□□□ 0.97
CHRNA4-209ENST00000627000 C22orf31O95567 290 aa21.12■□□□□ 0.97
CHRNA4-209ENST00000627000 GH1P01241 217 aa21.12■□□□□ 0.97
CHRNA4-209ENST00000627000 ZNF286BP0CG31 522 aa21.12■□□□□ 0.97
CHRNA4-209ENST00000627000 INSRRP14616 1297 aa21.12■□□□□ 0.97
CHRNA4-209ENST00000627000 FKBP1BP68106 108 aa21.12■□□□□ 0.97
CHRNA4-209ENST00000627000 CDR2LQ86X02 465 aaPredicted RBP21.12■□□□□ 0.97
CHRNA4-209ENST00000627000 EXOC8Q8IYI6 725 aa21.12■□□□□ 0.97
CHRNA4-209ENST00000627000 USP38Q8NB14 1042 aa21.12■□□□□ 0.97
CHRNA4-209ENST00000627000 PBKQ96KB5 322 aa21.12■□□□□ 0.97
CHRNA4-209ENST00000627000 CES2O00748 559 aa21.11■□□□□ 0.97
CHRNA4-209ENST00000627000 STRNO43815 780 aa21.11■□□□□ 0.97
CHRNA4-209ENST00000627000 GPC5P78333 572 aa21.11■□□□□ 0.97
CHRNA4-209ENST00000627000 CCDC70Q6NSX1 233 aa21.11■□□□□ 0.97
CHRNA4-209ENST00000627000 ENOSF1Q7L5Y1 443 aa21.11■□□□□ 0.97
CHRNA4-209ENST00000627000 DPP9Q86TI2 863 aa21.11■□□□□ 0.97
CHRNA4-209ENST00000627000 BRSK2Q8IWQ3 736 aa21.11■□□□□ 0.97
CHRNA4-209ENST00000627000 ABRAQ8N0Z2 381 aa21.11■□□□□ 0.97
CHRNA4-209ENST00000627000 JPH2Q9BR39 696 aaPredicted RBP21.11■□□□□ 0.97
CHRNA4-209ENST00000627000 MINDY3Q9H8M7 445 aa21.11■□□□□ 0.97
CHRNA4-209ENST00000627000 CTTNBP2NLQ9P2B4 639 aa21.11■□□□□ 0.97
CHRNA4-209ENST00000627000 RBM47A0AV96 593 aaKnown RBP21.1■□□□□ 0.97
CHRNA4-209ENST00000627000 INO80B-WBP1J3KQ70 363 aa21.1■□□□□ 0.97
CHRNA4-209ENST00000627000 GZMAP12544 262 aa21.1■□□□□ 0.97
CHRNA4-209ENST00000627000 C8orf74Q6P047 294 aa21.1■□□□□ 0.97
CHRNA4-209ENST00000627000 CCNI2Q6ZMN8 369 aaPredicted RBP21.1■□□□□ 0.97
CHRNA4-209ENST00000627000 HDXQ7Z353 690 aa21.1■□□□□ 0.97
CHRNA4-209ENST00000627000 PPP1R16BQ96T49 567 aa21.1■□□□□ 0.97
CHRNA4-209ENST00000627000 INO80BQ9C086 356 aaPredicted RBP21.1■□□□□ 0.97
CHRNA4-209ENST00000627000 C2orf40Q9H1Z8 148 aa21.1■□□□□ 0.97
CHRNA4-209ENST00000627000 PLEKHA4Q9H4M7 779 aa21.1■□□□□ 0.97
CHRNA4-209ENST00000627000 UMODL1Q5DID0 1318 aa21.1■□□□□ 0.97
CHRNA4-209ENST00000627000 MCM3P25205 808 aa21.1■□□□□ 0.97
CHRNA4-209ENST00000627000 RHOT2Q8IXI1 618 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms