RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 ALCAMQ13740 583 aa18.29■□□□□ 0.52
UBE3D-208ENST00000626828 NAB2Q15742 525 aa18.29■□□□□ 0.52
UBE3D-208ENST00000626828 CHAMP1Q96JM3 812 aa18.29■□□□□ 0.52
UBE3D-208ENST00000626828 PPP1R10Q96QC0 940 aaKnown RBP18.29■□□□□ 0.52
UBE3D-208ENST00000626828 STRA6Q9BX79 667 aa18.29■□□□□ 0.52
UBE3D-208ENST00000626828 TRIM9Q9C026 710 aa18.29■□□□□ 0.52
UBE3D-208ENST00000626828 CXCL16Q9H2A7 254 aa18.29■□□□□ 0.52
UBE3D-208ENST00000626828 PLEKHA5Q9HAU0 1116 aa18.29■□□□□ 0.52
UBE3D-208ENST00000626828 SLC38A7Q9NVC3 462 aa18.29■□□□□ 0.52
UBE3D-208ENST00000626828 MARCH5Q9NX47 278 aa18.29■□□□□ 0.52
UBE3D-208ENST00000626828 TBC1D7Q9P0N9 293 aa18.29■□□□□ 0.52
UBE3D-208ENST00000626828 USP25Q9UHP3 1055 aa18.29■□□□□ 0.52
UBE3D-208ENST00000626828 EXOC7Q9UPT5 735 aa18.29■□□□□ 0.52
UBE3D-208ENST00000626828 TCF20Q9UGU0 1960 aaKnown RBP18.29■□□□□ 0.52
UBE3D-208ENST00000626828 TTC28Q96AY4 2481 aa18.29■□□□□ 0.52
UBE3D-208ENST00000626828 A0A0B4J269 797 aa18.28■□□□□ 0.52
UBE3D-208ENST00000626828 SOD2P04179 222 aa18.28■□□□□ 0.52
UBE3D-208ENST00000626828 SLFN14P0C7P3 912 aa18.28■□□□□ 0.52
UBE3D-208ENST00000626828 KCNE1P15382 129 aa18.28■□□□□ 0.52
UBE3D-208ENST00000626828 CA8P35219 290 aa18.28■□□□□ 0.52
UBE3D-208ENST00000626828 HSP90AA2PQ14568 343 aaPredicted RBP18.28■□□□□ 0.52
UBE3D-208ENST00000626828 POSTNQ15063 836 aa18.28■□□□□ 0.52
UBE3D-208ENST00000626828 SLC10A6Q3KNW5 377 aa18.28■□□□□ 0.52
UBE3D-208ENST00000626828 DCLRE1AQ6PJP8 1040 aa18.28■□□□□ 0.52
UBE3D-208ENST00000626828 CEP57L1Q8IYX8 460 aa18.28■□□□□ 0.52
UBE3D-208ENST00000626828 ACCSQ96QU6 501 aa18.28■□□□□ 0.52
UBE3D-208ENST00000626828 VN1R3Q9BXE9 311 aa18.28■□□□□ 0.52
UBE3D-208ENST00000626828 HAPLN2Q9GZV7 340 aa18.28■□□□□ 0.52
UBE3D-208ENST00000626828 MRPL17Q9NRX2 175 aaKnown RBP18.28■□□□□ 0.52
UBE3D-208ENST00000626828 ADAM28Q9UKQ2 775 aa18.28■□□□□ 0.52
UBE3D-208ENST00000626828 CUL9Q8IWT3 2517 aa18.27■□□□□ 0.52
UBE3D-208ENST00000626828 A0A1B0GVL5 298 aa18.27■□□□□ 0.52
UBE3D-208ENST00000626828 H3BQ06 376 aaPredicted RBP18.27■□□□□ 0.52
UBE3D-208ENST00000626828 OGTO15294 1046 aa18.27■□□□□ 0.52
UBE3D-208ENST00000626828 LINC01565O15544 149 aa18.27■□□□□ 0.52
UBE3D-208ENST00000626828 PPP1R37O75864 691 aa18.27■□□□□ 0.52
UBE3D-208ENST00000626828 GCNT3O95395 438 aa18.27■□□□□ 0.52
UBE3D-208ENST00000626828 EFEMP2O95967 443 aa18.27■□□□□ 0.52
UBE3D-208ENST00000626828 SRGAP2BP0DMP2 458 aa18.27■□□□□ 0.52
UBE3D-208ENST00000626828 NDUFV1P49821 464 aa18.27■□□□□ 0.52
UBE3D-208ENST00000626828 KCNQ1P51787 676 aa18.27■□□□□ 0.52
UBE3D-208ENST00000626828 TMEM184AQ6ZMB5 413 aa18.27■□□□□ 0.52
UBE3D-208ENST00000626828 STXBP4Q6ZWJ1 553 aa18.27■□□□□ 0.52
UBE3D-208ENST00000626828 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.27■□□□□ 0.52
UBE3D-208ENST00000626828 DDX27Q96GQ7 796 aaKnown RBP18.27■□□□□ 0.52
UBE3D-208ENST00000626828 SNX27Q96L92 541 aa18.27■□□□□ 0.52
UBE3D-208ENST00000626828 UROC1Q96N76 676 aa18.27■□□□□ 0.52
UBE3D-208ENST00000626828 SERTAD1Q9UHV2 236 aa18.27■□□□□ 0.52
UBE3D-208ENST00000626828 FAM50BQ9Y247 325 aa18.27■□□□□ 0.52
UBE3D-208ENST00000626828 STYXL1Q9Y6J8 313 aa18.27■□□□□ 0.52
UBE3D-208ENST00000626828 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.26■□□□□ 0.51
UBE3D-208ENST00000626828 A0A1W2PQ27 194 aa18.26■□□□□ 0.51
UBE3D-208ENST00000626828 A0A1W2PQ64 194 aa18.26■□□□□ 0.51
UBE3D-208ENST00000626828 A0A1W2PQD8 194 aa18.26■□□□□ 0.51
UBE3D-208ENST00000626828 CASTOR2A6NHX0 329 aa18.26■□□□□ 0.51
UBE3D-208ENST00000626828 ANKRD63C9JTQ0 380 aa18.26■□□□□ 0.51
UBE3D-208ENST00000626828 LILRB3O75022 631 aa18.26■□□□□ 0.51
UBE3D-208ENST00000626828 ASIC1P78348 528 aa18.26■□□□□ 0.51
UBE3D-208ENST00000626828 DLX2Q07687 328 aaPredicted RBP18.26■□□□□ 0.51
UBE3D-208ENST00000626828 USP41Q3LFD5 358 aa18.26■□□□□ 0.51
UBE3D-208ENST00000626828 SEZ6Q53EL9 994 aa18.26■□□□□ 0.51
UBE3D-208ENST00000626828 GLRA4Q5JXX5 417 aa18.26■□□□□ 0.51
UBE3D-208ENST00000626828 L1TD1Q5T7N2 865 aaKnown RBP18.26■□□□□ 0.51
UBE3D-208ENST00000626828 KIAA1841Q6NSI8 718 aa18.26■□□□□ 0.51
UBE3D-208ENST00000626828 FUT10Q6P4F1 479 aa18.26■□□□□ 0.51
UBE3D-208ENST00000626828 SLC39A4Q6P5W5 647 aa18.26■□□□□ 0.51
UBE3D-208ENST00000626828 TAS1R1Q7RTX1 841 aa18.26■□□□□ 0.51
UBE3D-208ENST00000626828 GPR65Q8IYL9 337 aa18.26■□□□□ 0.51
UBE3D-208ENST00000626828 RNF168Q8IYW5 571 aaPredicted RBP18.26■□□□□ 0.51
UBE3D-208ENST00000626828 AUTS2Q8WXX7 1259 aa18.26■□□□□ 0.51
UBE3D-208ENST00000626828 RABGGTAQ92696 567 aa18.26■□□□□ 0.51
UBE3D-208ENST00000626828 TSPAN18Q96SJ8 248 aa18.26■□□□□ 0.51
UBE3D-208ENST00000626828 PAAF1Q9BRP4 392 aa18.26■□□□□ 0.51
UBE3D-208ENST00000626828 MSTO1Q9BUK6 570 aa18.26■□□□□ 0.51
UBE3D-208ENST00000626828 HERC2P3Q9BVR0 1158 aa18.26■□□□□ 0.51
UBE3D-208ENST00000626828 EMILIN2Q9BXX0 1053 aa18.26■□□□□ 0.51
UBE3D-208ENST00000626828 TMEM206Q9H813 350 aa18.26■□□□□ 0.51
UBE3D-208ENST00000626828 RPF1Q9H9Y2 349 aaKnown RBP18.26■□□□□ 0.51
UBE3D-208ENST00000626828 CHST7Q9NS84 486 aa18.26■□□□□ 0.51
UBE3D-208ENST00000626828 CNTN3Q9P232 1028 aa18.26■□□□□ 0.51
UBE3D-208ENST00000626828 HPSEQ9Y251 543 aa18.26■□□□□ 0.51
UBE3D-208ENST00000626828 UNC80Q8N2C7 3258 aa18.25■□□□□ 0.51
UBE3D-208ENST00000626828 FAM237AA0A1B0GTK4 181 aa18.25■□□□□ 0.51
UBE3D-208ENST00000626828 PVALEFA0A1B0GWK0 134 aa18.25■□□□□ 0.51
UBE3D-208ENST00000626828 DLL1O00548 723 aa18.25■□□□□ 0.51
UBE3D-208ENST00000626828 CLASP2O75122 1294 aaKnown RBP18.25■□□□□ 0.51
UBE3D-208ENST00000626828 URODP06132 367 aa18.25■□□□□ 0.51
UBE3D-208ENST00000626828 PFKFB1P16118 471 aa18.25■□□□□ 0.51
UBE3D-208ENST00000626828 RPL9P32969 192 aaKnown RBP18.25■□□□□ 0.51
UBE3D-208ENST00000626828 AFMP43652 599 aa18.25■□□□□ 0.51
UBE3D-208ENST00000626828 ELAVL2Q12926 359 aaKnown RBP18.25■□□□□ 0.51
UBE3D-208ENST00000626828 COASYQ13057 564 aa18.25■□□□□ 0.51
UBE3D-208ENST00000626828 KCNC3Q14003 757 aa18.25■□□□□ 0.51
UBE3D-208ENST00000626828 PTPN14Q15678 1187 aa18.25■□□□□ 0.51
UBE3D-208ENST00000626828 KIAA0319Q5VV43 1072 aa18.25■□□□□ 0.51
UBE3D-208ENST00000626828 PTCRAQ6ISU1 281 aaPredicted RBP18.25■□□□□ 0.51
UBE3D-208ENST00000626828 UNC13DQ70J99 1090 aa18.25■□□□□ 0.51
UBE3D-208ENST00000626828 PPFIBP1Q86W92 1011 aa18.25■□□□□ 0.51
UBE3D-208ENST00000626828 CD302Q8IX05 232 aa18.25■□□□□ 0.51
UBE3D-208ENST00000626828 SYCP3Q8IZU3 236 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms