RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 IKBKEQ14164 716 aa18.04■□□□□ 0.48
CCNA1-203ENST00000625767 PTPN21Q16825 1174 aa18.04■□□□□ 0.48
CCNA1-203ENST00000625767 DCAF17Q5H9S7 520 aaPredicted RBP18.04■□□□□ 0.48
CCNA1-203ENST00000625767 GLRA4Q5JXX5 417 aa18.04■□□□□ 0.48
CCNA1-203ENST00000625767 MRPL10Q7Z7H8 261 aaKnown RBP18.04■□□□□ 0.48
CCNA1-203ENST00000625767 TRIM59Q8IWR1 403 aa18.04■□□□□ 0.48
CCNA1-203ENST00000625767 EFCAB13Q8IY85 973 aa18.04■□□□□ 0.48
CCNA1-203ENST00000625767 RPUSD2Q8IZ73 545 aaKnown RBP18.04■□□□□ 0.48
CCNA1-203ENST00000625767 ZMAT2Q96NC0 199 aaKnown RBP18.04■□□□□ 0.48
CCNA1-203ENST00000625767 MMRN2Q9H8L6 949 aa18.04■□□□□ 0.48
CCNA1-203ENST00000625767 RPF1Q9H9Y2 349 aaKnown RBP18.04■□□□□ 0.48
CCNA1-203ENST00000625767 ARMCX3Q9UH62 379 aaPredicted RBP18.04■□□□□ 0.48
CCNA1-203ENST00000625767 PLAGL2Q9UPG8 496 aa18.04■□□□□ 0.48
CCNA1-203ENST00000625767 CDH23Q9H251 3354 aa18.04■□□□□ 0.48
CCNA1-203ENST00000625767 TTC26A0AVF1 554 aa18.03■□□□□ 0.48
CCNA1-203ENST00000625767 FGFR1OPO95684 399 aaKnown RBP18.03■□□□□ 0.48
CCNA1-203ENST00000625767 ITGA4P13612 1032 aa18.03■□□□□ 0.48
CCNA1-203ENST00000625767 MLH1P40692 756 aa18.03■□□□□ 0.48
CCNA1-203ENST00000625767 MTIF2P46199 727 aaKnown RBP18.03■□□□□ 0.48
CCNA1-203ENST00000625767 TMEM240Q5SV17 173 aa18.03■□□□□ 0.48
CCNA1-203ENST00000625767 FRMD5Q7Z6J6 570 aa18.03■□□□□ 0.48
CCNA1-203ENST00000625767 PARD3BQ8TEW8 1205 aa18.03■□□□□ 0.48
CCNA1-203ENST00000625767 SNX27Q96L92 541 aa18.03■□□□□ 0.48
CCNA1-203ENST00000625767 VPS16Q9H269 839 aa18.03■□□□□ 0.48
CCNA1-203ENST00000625767 KIAA1586Q9HCI6 787 aa18.03■□□□□ 0.48
CCNA1-203ENST00000625767 MIOSQ9NXC5 875 aa18.03■□□□□ 0.48
CCNA1-203ENST00000625767 CXXC1Q9P0U4 656 aaPredicted RBP18.03■□□□□ 0.48
CCNA1-203ENST00000625767 COL4A6Q14031 1691 aa18.03■□□□□ 0.48
CCNA1-203ENST00000625767 UPP2O95045 317 aa18.03■□□□□ 0.48
CCNA1-203ENST00000625767 NFICP08651 508 aa18.03■□□□□ 0.48
CCNA1-203ENST00000625767 CDK11BP21127 795 aaKnown RBP18.03■□□□□ 0.48
CCNA1-203ENST00000625767 RAB27AP51159 221 aa18.03■□□□□ 0.48
CCNA1-203ENST00000625767 VAMP7P51809 220 aa18.03■□□□□ 0.48
CCNA1-203ENST00000625767 WDR5P61964 334 aaKnown RBP18.03■□□□□ 0.48
CCNA1-203ENST00000625767 PPP3CAQ08209 521 aa18.03■□□□□ 0.48
CCNA1-203ENST00000625767 PSMD6Q15008 389 aa18.03■□□□□ 0.48
CCNA1-203ENST00000625767 MIIPQ5JXC2 388 aa18.03■□□□□ 0.48
CCNA1-203ENST00000625767 CLLU1OSQ5K130 101 aa18.03■□□□□ 0.48
CCNA1-203ENST00000625767 TCERG1LQ5VWI1 586 aa18.03■□□□□ 0.48
CCNA1-203ENST00000625767 CRIPAKQ8N1N5 446 aa18.03■□□□□ 0.48
CCNA1-203ENST00000625767 GSTCDQ8NEC7 633 aa18.03■□□□□ 0.48
CCNA1-203ENST00000625767 OR5B17Q8NGF7 314 aa18.03■□□□□ 0.48
CCNA1-203ENST00000625767 ZNF516Q92618 1163 aa18.03■□□□□ 0.48
CCNA1-203ENST00000625767 SLC35C1Q96A29 364 aa18.03■□□□□ 0.48
CCNA1-203ENST00000625767 GAD1Q99259 594 aa18.03■□□□□ 0.48
CCNA1-203ENST00000625767 TUBGCP2Q9BSJ2 902 aa18.03■□□□□ 0.48
CCNA1-203ENST00000625767 MAGEC2Q9UBF1 373 aaPredicted RBP18.03■□□□□ 0.48
CCNA1-203ENST00000625767 FSD2A1L4K1 749 aa18.02■□□□□ 0.47
CCNA1-203ENST00000625767 PTGESO14684 152 aa18.02■□□□□ 0.47
CCNA1-203ENST00000625767 MAPK13O15264 365 aa18.02■□□□□ 0.47
CCNA1-203ENST00000625767 PRKCSHP14314 528 aaPredicted RBP18.02■□□□□ 0.47
CCNA1-203ENST00000625767 EEF1GP26641 437 aaKnown RBP18.02■□□□□ 0.47
CCNA1-203ENST00000625767 MAGEA10P43363 369 aaPredicted RBP18.02■□□□□ 0.47
CCNA1-203ENST00000625767 GUCY2FP51841 1108 aa18.02■□□□□ 0.47
CCNA1-203ENST00000625767 JADE1Q6IE81 842 aa18.02■□□□□ 0.47
CCNA1-203ENST00000625767 ALKAL1Q6UXT8 129 aa18.02■□□□□ 0.47
CCNA1-203ENST00000625767 INTS8Q75QN2 995 aaKnown RBP18.02■□□□□ 0.47
CCNA1-203ENST00000625767 APBB1IPQ7Z5R6 666 aaPredicted RBP18.02■□□□□ 0.47
CCNA1-203ENST00000625767 NAP1L5Q96NT1 182 aaPredicted RBP18.02■□□□□ 0.47
CCNA1-203ENST00000625767 C1orf112Q9NSG2 853 aa18.02■□□□□ 0.47
CCNA1-203ENST00000625767 CACNG4Q9UBN1 327 aa18.02■□□□□ 0.47
CCNA1-203ENST00000625767 LIMA1Q9UHB6 759 aaKnown RBP18.02■□□□□ 0.47
CCNA1-203ENST00000625767 ARL5CA6NH57 179 aa18.01■□□□□ 0.47
CCNA1-203ENST00000625767 GNA14O95837 355 aa18.01■□□□□ 0.47
CCNA1-203ENST00000625767 PFKMP08237 780 aa18.01■□□□□ 0.47
CCNA1-203ENST00000625767 FANCCQ00597 558 aa18.01■□□□□ 0.47
CCNA1-203ENST00000625767 PLCB2Q00722 1185 aa18.01■□□□□ 0.47
CCNA1-203ENST00000625767 FAM117BQ6P1L5 589 aa18.01■□□□□ 0.47
CCNA1-203ENST00000625767 FAM114A1Q8IWE2 563 aa18.01■□□□□ 0.47
CCNA1-203ENST00000625767 HELQQ8TDG4 1101 aa18.01■□□□□ 0.47
CCNA1-203ENST00000625767 ELMO3Q96BJ8 720 aa18.01■□□□□ 0.47
CCNA1-203ENST00000625767 LBHD1Q9BQE6 289 aaPredicted RBP18.01■□□□□ 0.47
CCNA1-203ENST00000625767 RSAD1Q9HA92 442 aa18.01■□□□□ 0.47
CCNA1-203ENST00000625767 INPP5FQ9Y2H2 1132 aa18.01■□□□□ 0.47
CCNA1-203ENST00000625767 ABHD14A-ACY1A0A1B0GW23 586 aa18■□□□□ 0.47
CCNA1-203ENST00000625767 ZBBXA8MT70 800 aa18■□□□□ 0.47
CCNA1-203ENST00000625767 LRRN2O75325 713 aa18■□□□□ 0.47
CCNA1-203ENST00000625767 FGBP02675 491 aa18■□□□□ 0.47
CCNA1-203ENST00000625767 KRT13P13646 458 aa18■□□□□ 0.47
CCNA1-203ENST00000625767 GCLMP48507 274 aa18■□□□□ 0.47
CCNA1-203ENST00000625767 SCNN1GP51170 649 aa18■□□□□ 0.47
CCNA1-203ENST00000625767 COPB1P53618 953 aaKnown RBP18■□□□□ 0.47
CCNA1-203ENST00000625767 YARSP54577 528 aaKnown RBP18■□□□□ 0.47
CCNA1-203ENST00000625767 PPP2R3AQ06190 1150 aa18■□□□□ 0.47
CCNA1-203ENST00000625767 CBWD6Q4V339 395 aa18■□□□□ 0.47
CCNA1-203ENST00000625767 CBWD3Q5JTY5 395 aa18■□□□□ 0.47
CCNA1-203ENST00000625767 CBWD5Q5RIA9 395 aa18■□□□□ 0.47
CCNA1-203ENST00000625767 C18orf25Q96B23 403 aaPredicted RBP18■□□□□ 0.47
CCNA1-203ENST00000625767 INTS13Q9NVM9 706 aa18■□□□□ 0.47
CCNA1-203ENST00000625767 TMEM161AQ9NX61 479 aa18■□□□□ 0.47
CCNA1-203ENST00000625767 CNTN3Q9P232 1028 aa18■□□□□ 0.47
CCNA1-203ENST00000625767 HCSTQ9UBK5 93 aa18■□□□□ 0.47
CCNA1-203ENST00000625767 NR2E3Q9Y5X4 410 aa18■□□□□ 0.47
CCNA1-203ENST00000625767 CHD7Q9P2D1 2997 aa18■□□□□ 0.47
CCNA1-203ENST00000625767 SCN1AP35498 2009 aa18■□□□□ 0.47
CCNA1-203ENST00000625767 OFD1O75665 1012 aa17.99■□□□□ 0.47
CCNA1-203ENST00000625767 POMCP01189 267 aa17.99■□□□□ 0.47
CCNA1-203ENST00000625767 TNNI1P19237 187 aa17.99■□□□□ 0.47
CCNA1-203ENST00000625767 KCNH2Q12809 1159 aa17.99■□□□□ 0.47
CCNA1-203ENST00000625767 KYAT1Q16773 422 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms