RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 NAALADL2Q58DX5 795 aa7.1□□□□□ -1.27
TCF4-249ENST00000625716 RILPL1Q5EBL4 403 aa7.1□□□□□ -1.27
TCF4-249ENST00000625716 DTHD1Q6ZMT9 781 aa7.1□□□□□ -1.27
TCF4-249ENST00000625716 SRGAP1Q7Z6B7 1085 aa7.1□□□□□ -1.27
TCF4-249ENST00000625716 CATSPER3Q86XQ3 398 aa7.1□□□□□ -1.27
TCF4-249ENST00000625716 KSR1Q8IVT5 923 aa7.1□□□□□ -1.27
TCF4-249ENST00000625716 ELOA3Q8NG57 546 aa7.1□□□□□ -1.27
TCF4-249ENST00000625716 PIGOQ8TEQ8 1089 aa7.1□□□□□ -1.27
TCF4-249ENST00000625716 CLP1Q92989 425 aaKnown RBP7.1□□□□□ -1.27
TCF4-249ENST00000625716 PPP2R3CQ969Q6 453 aa7.1□□□□□ -1.27
TCF4-249ENST00000625716 CEP89Q96ST8 783 aa7.1□□□□□ -1.27
TCF4-249ENST00000625716 POLR3CQ9BUI4 534 aaPredicted RBP7.1□□□□□ -1.27
TCF4-249ENST00000625716 BACH2Q9BYV9 841 aa7.1□□□□□ -1.27
TCF4-249ENST00000625716 LMAN2LQ9H0V9 348 aa7.1□□□□□ -1.27
TCF4-249ENST00000625716 PRDM6Q9NQX0 595 aa7.1□□□□□ -1.27
TCF4-249ENST00000625716 WRAP73Q9P2S5 460 aaPredicted RBP7.1□□□□□ -1.27
TCF4-249ENST00000625716 PIN4Q9Y237 131 aaKnown RBP7.1□□□□□ -1.27
TCF4-249ENST00000625716 STARD13Q9Y3M8 1113 aa7.1□□□□□ -1.27
TCF4-249ENST00000625716 MRPL42Q9Y6G3 142 aaKnown RBP7.1□□□□□ -1.27
TCF4-249ENST00000625716 GBF1Q92538 1859 aa7.1□□□□□ -1.27
TCF4-249ENST00000625716 SZT2Q5T011 3432 aa7.1□□□□□ -1.27
TCF4-249ENST00000625716 MYH9P35579 1960 aaKnown RBP7.09□□□□□ -1.27
TCF4-249ENST00000625716 A0A087WWV3 80 aa7.09□□□□□ -1.27
TCF4-249ENST00000625716 A0A0U1RQF3 1178 aa7.09□□□□□ -1.27
TCF4-249ENST00000625716 ARHGEF35A5YM69 484 aa7.09□□□□□ -1.27
TCF4-249ENST00000625716 SFI1A8K8P3 1242 aa7.09□□□□□ -1.27
TCF4-249ENST00000625716 C5orf67F2Z3F1 127 aa7.09□□□□□ -1.27
TCF4-249ENST00000625716 INO80B-WBP1J3KQ70 363 aa7.09□□□□□ -1.27
TCF4-249ENST00000625716 NCK2O43639 380 aa7.09□□□□□ -1.27
TCF4-249ENST00000625716 USO1O60763 962 aaKnown RBP7.09□□□□□ -1.27
TCF4-249ENST00000625716 FGFR1P11362 822 aa7.09□□□□□ -1.27
TCF4-249ENST00000625716 PDCP20941 246 aa7.09□□□□□ -1.27
TCF4-249ENST00000625716 MUTP22033 750 aa7.09□□□□□ -1.27
TCF4-249ENST00000625716 ITGB7P26010 798 aa7.09□□□□□ -1.27
TCF4-249ENST00000625716 RPA1P27694 616 aa7.09□□□□□ -1.27
TCF4-249ENST00000625716 GATMP50440 423 aa7.09□□□□□ -1.27
TCF4-249ENST00000625716 RAB27AP51159 221 aa7.09□□□□□ -1.27
TCF4-249ENST00000625716 PCBP1Q15365 356 aaKnown RBP eCLIP7.09□□□□□ -1.27
TCF4-249ENST00000625716 FAM102BQ5T8I3 360 aa7.09□□□□□ -1.27
TCF4-249ENST00000625716 KRT79Q5XKE5 535 aa7.09□□□□□ -1.27
TCF4-249ENST00000625716 EP400NLQ6ZTU2 488 aa7.09□□□□□ -1.27
TCF4-249ENST00000625716 FERMT3Q86UX7 667 aa7.09□□□□□ -1.27
TCF4-249ENST00000625716 ECHDC2Q86YB7 292 aa7.09□□□□□ -1.27
TCF4-249ENST00000625716 THNSL1Q8IYQ7 743 aa7.09□□□□□ -1.27
TCF4-249ENST00000625716 RNF149Q8NC42 400 aa7.09□□□□□ -1.27
TCF4-249ENST00000625716 MCPH1Q8NEM0 835 aa7.09□□□□□ -1.27
TCF4-249ENST00000625716 MICAL1Q8TDZ2 1067 aa7.09□□□□□ -1.27
TCF4-249ENST00000625716 P2RX5Q93086 422 aa7.09□□□□□ -1.27
TCF4-249ENST00000625716 PGBD4Q96DM1 585 aa7.09□□□□□ -1.27
TCF4-249ENST00000625716 HSH2DQ96JZ2 352 aa7.09□□□□□ -1.27
TCF4-249ENST00000625716 ASB2Q96Q27 587 aa7.09□□□□□ -1.27
TCF4-249ENST00000625716 MRPL9Q9BYD2 267 aaKnown RBP7.09□□□□□ -1.27
TCF4-249ENST00000625716 TMEM117Q9H0C3 514 aa7.09□□□□□ -1.27
TCF4-249ENST00000625716 NSUN3Q9H649 340 aaKnown RBP7.09□□□□□ -1.27
TCF4-249ENST00000625716 RC3H2Q9HBD1 1191 aaKnown RBP7.09□□□□□ -1.27
TCF4-249ENST00000625716 IFT122Q9HBG6 1241 aa7.09□□□□□ -1.27
TCF4-249ENST00000625716 ALG13Q9NP73 1137 aaKnown RBP7.09□□□□□ -1.27
TCF4-249ENST00000625716 TYW1Q9NV66 732 aaKnown RBP7.09□□□□□ -1.27
TCF4-249ENST00000625716 PUF60Q9UHX1 559 aaKnown RBP7.09□□□□□ -1.27
TCF4-249ENST00000625716 DBR1Q9UK59 544 aaKnown RBP7.09□□□□□ -1.27
TCF4-249ENST00000625716 PCDHB6Q9Y5E3 794 aa7.09□□□□□ -1.27
TCF4-249ENST00000625716 GTF3C3Q9Y5Q9 886 aa7.09□□□□□ -1.27
TCF4-249ENST00000625716 GPC6Q9Y625 555 aaPredicted RBP7.09□□□□□ -1.27
TCF4-249ENST00000625716 MICAL3Q7RTP6 2002 aa7.09□□□□□ -1.27
TCF4-249ENST00000625716 PTPRSQ13332 1948 aa7.08□□□□□ -1.28
TCF4-249ENST00000625716 VPS37CA5D8V6 355 aaPredicted RBP7.08□□□□□ -1.28
TCF4-249ENST00000625716 GRM6O15303 877 aa7.08□□□□□ -1.28
TCF4-249ENST00000625716 SIN3BO75182 1162 aa7.08□□□□□ -1.28
TCF4-249ENST00000625716 MED24O75448 989 aa7.08□□□□□ -1.28
TCF4-249ENST00000625716 CSPG5O95196 566 aa7.08□□□□□ -1.28
TCF4-249ENST00000625716 SPATA31C1P0DKV0 1188 aa7.08□□□□□ -1.28
TCF4-249ENST00000625716 LAG3P18627 525 aa7.08□□□□□ -1.28
TCF4-249ENST00000625716 AXLP30530 894 aa7.08□□□□□ -1.28
TCF4-249ENST00000625716 PRPHP41219 470 aa7.08□□□□□ -1.28
TCF4-249ENST00000625716 RARRES1P49788 294 aa7.08□□□□□ -1.28
TCF4-249ENST00000625716 TOB1P50616 345 aaPredicted RBP7.08□□□□□ -1.28
TCF4-249ENST00000625716 ATP1A2P50993 1020 aa7.08□□□□□ -1.28
TCF4-249ENST00000625716 KRT17Q04695 432 aa7.08□□□□□ -1.28
TCF4-249ENST00000625716 RNASELQ05823 741 aaKnown RBP7.08□□□□□ -1.28
TCF4-249ENST00000625716 POU5F1BQ06416 359 aa7.08□□□□□ -1.28
TCF4-249ENST00000625716 BMS1Q14692 1282 aaKnown RBP7.08□□□□□ -1.28
TCF4-249ENST00000625716 ZRSR1Q15695 479 aaKnown RBP7.08□□□□□ -1.28
TCF4-249ENST00000625716 TMEM132AQ24JP5 1023 aa7.08□□□□□ -1.28
TCF4-249ENST00000625716 XP32Q5T750 250 aa7.08□□□□□ -1.28
TCF4-249ENST00000625716 GLB1LQ6UWU2 654 aa7.08□□□□□ -1.28
TCF4-249ENST00000625716 MAEAQ7L5Y9 396 aa7.08□□□□□ -1.28
TCF4-249ENST00000625716 BRAPQ7Z569 592 aa7.08□□□□□ -1.28
TCF4-249ENST00000625716 HACE1Q8IYU2 909 aa7.08□□□□□ -1.28
TCF4-249ENST00000625716 SIX5Q8N196 739 aa7.08□□□□□ -1.28
TCF4-249ENST00000625716 LRRC43Q8N309 656 aa7.08□□□□□ -1.28
TCF4-249ENST00000625716 C4orf32Q8N8J7 132 aa7.08□□□□□ -1.28
TCF4-249ENST00000625716 KLHL23Q8NBE8 558 aa7.08□□□□□ -1.28
TCF4-249ENST00000625716 COLGALT1Q8NBJ5 622 aa7.08□□□□□ -1.28
TCF4-249ENST00000625716 TSEN2Q8NCE0 465 aaKnown RBP7.08□□□□□ -1.28
TCF4-249ENST00000625716 URGCPQ8TCY9 931 aa7.08□□□□□ -1.28
TCF4-249ENST00000625716 HELQQ8TDG4 1101 aa7.08□□□□□ -1.28
TCF4-249ENST00000625716 SNX29Q8TEQ0 813 aa7.08□□□□□ -1.28
TCF4-249ENST00000625716 RSPH1Q8WYR4 309 aa7.08□□□□□ -1.28
TCF4-249ENST00000625716 CDK5RAP3Q96JB5 506 aa7.08□□□□□ -1.28
TCF4-249ENST00000625716 ZNF558Q96NG5 402 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms