RNA–Protein interactions for RNA: ENST00000623610.1

CDKL5-206, Transcript of cyclin dependent kinase like 5, humanhuman

Gene CDKL5, Length 2,130 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-206ENST00000623610 CLEC4AQ9UMR7 237 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 LIMCH1Q9UPQ0 1083 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 ANKRD26Q9UPS8 1709 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 TTC41PQ6P2S7 1318 aa9.26□□□□□ -0.93
CDKL5-206ENST00000623610 THSD7AQ9UPZ6 1657 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 M0R2C6 588 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 ZNF189O75820 626 aaPredicted RBP9.25□□□□□ -0.93
CDKL5-206ENST00000623610 ZBED1O96006 694 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 PSAPP07602 524 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 ARAFP10398 606 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 ARF4P18085 180 aaPredicted RBP9.25□□□□□ -0.93
CDKL5-206ENST00000623610 TNFSF4P23510 183 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 PRKAR1BP31321 381 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 CACNB3P54284 484 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 CYP4F8P98187 520 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 GUCY1B3Q02153 619 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 RBBP5Q15291 538 aaKnown RBP9.25□□□□□ -0.93
CDKL5-206ENST00000623610 ALG11Q2TAA5 492 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 PRR16Q569H4 304 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 CLEC2AQ6UVW9 174 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 RAPGEF5Q92565 580 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 EXOC4Q96A65 974 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 TUBGCP3Q96CW5 907 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 AK8Q96MA6 479 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 GAS2L1Q99501 681 aaPredicted RBP9.25□□□□□ -0.93
CDKL5-206ENST00000623610 TCF25Q9BQ70 676 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 RIOK1Q9BRS2 568 aaKnown RBP9.25□□□□□ -0.93
CDKL5-206ENST00000623610 ZCWPW1Q9H0M4 648 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 OR10A4Q9H209 315 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 TTC12Q9H892 705 aaPredicted RBP9.25□□□□□ -0.93
CDKL5-206ENST00000623610 TEKT2Q9UIF3 430 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 PCOLCE2Q9UKZ9 415 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 PEAK1Q9H792 1746 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 A6NHS1 94 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 VAV1P15498 845 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 PORP16435 677 aaPredicted RBP9.25□□□□□ -0.93
CDKL5-206ENST00000623610 IL11P20809 199 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 MAGEA10P43363 369 aaPredicted RBP9.25□□□□□ -0.93
CDKL5-206ENST00000623610 NEK4P51957 841 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 RIPK4P57078 832 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 ARPC4P59998 168 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 TFAP4Q01664 338 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 MAP3K10Q02779 954 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 BTKQ06187 659 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 GALNT1Q10472 559 aaPredicted RBP9.25□□□□□ -0.93
CDKL5-206ENST00000623610 COASYQ13057 564 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 GPS2Q13227 327 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 IKBKEQ14164 716 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 BTG3Q14201 252 aaPredicted RBP9.25□□□□□ -0.93
CDKL5-206ENST00000623610 PLCL1Q15111 1095 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 CFAP100Q494V2 611 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 FNDC3BQ53EP0 1204 aaKnown RBP9.25□□□□□ -0.93
CDKL5-206ENST00000623610 ODF2Q5BJF6 829 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 NXPE4Q6UWF7 544 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.25□□□□□ -0.93
CDKL5-206ENST00000623610 KRT27Q7Z3Y8 459 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 BNIPLQ7Z465 357 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 RSPH3Q86UC2 560 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 ACAP3Q96P50 834 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 DDX50Q9BQ39 737 aaKnown RBP9.25□□□□□ -0.93
CDKL5-206ENST00000623610 NOC4LQ9BVI4 516 aaKnown RBP9.25□□□□□ -0.93
CDKL5-206ENST00000623610 MXD3Q9BW11 206 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 SEMA3GQ9NS98 782 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 DOLKQ9UPQ8 538 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 TLR6Q9Y2C9 796 aa9.25□□□□□ -0.93
CDKL5-206ENST00000623610 BLMP54132 1417 aaPredicted RBP9.24□□□□□ -0.93
CDKL5-206ENST00000623610 A0A1W2PPL8 197 aa9.24□□□□□ -0.93
CDKL5-206ENST00000623610 MAPK13O15264 365 aa9.24□□□□□ -0.93
CDKL5-206ENST00000623610 TLR3O15455 904 aaKnown RBP9.24□□□□□ -0.93
CDKL5-206ENST00000623610 ASGR1P07306 291 aa9.24□□□□□ -0.93
CDKL5-206ENST00000623610 SLFN14P0C7P3 912 aa9.24□□□□□ -0.93
CDKL5-206ENST00000623610 COL6A2P12110 1019 aa9.24□□□□□ -0.93
CDKL5-206ENST00000623610 SFPQP23246 707 aaKnown RBP eCLIP9.24□□□□□ -0.93
CDKL5-206ENST00000623610 CPA2P48052 419 aa9.24□□□□□ -0.93
CDKL5-206ENST00000623610 PPIDQ08752 370 aaKnown RBP9.24□□□□□ -0.93
CDKL5-206ENST00000623610 MAP3K11Q16584 847 aa9.24□□□□□ -0.93
CDKL5-206ENST00000623610 INTS3Q68E01 1043 aaKnown RBP9.24□□□□□ -0.93
CDKL5-206ENST00000623610 PM20D1Q6GTS8 502 aa9.24□□□□□ -0.93
CDKL5-206ENST00000623610 RAB11FIP2Q7L804 512 aa9.24□□□□□ -0.93
CDKL5-206ENST00000623610 CAMKK1Q8N5S9 505 aa9.24□□□□□ -0.93
CDKL5-206ENST00000623610 SLC4A11Q8NBS3 891 aa9.24□□□□□ -0.93
CDKL5-206ENST00000623610 ARRDC4Q8NCT1 418 aa9.24□□□□□ -0.93
CDKL5-206ENST00000623610 ZMIZ2Q8NF64 920 aa9.24□□□□□ -0.93
CDKL5-206ENST00000623610 OR52K1Q8NGK4 314 aa9.24□□□□□ -0.93
CDKL5-206ENST00000623610 TTLL11Q8NHH1 800 aa9.24□□□□□ -0.93
CDKL5-206ENST00000623610 NCLNQ969V3 563 aa9.24□□□□□ -0.93
CDKL5-206ENST00000623610 RHOVQ96L33 236 aa9.24□□□□□ -0.93
CDKL5-206ENST00000623610 ATP6V1G3Q96LB4 118 aa9.24□□□□□ -0.93
CDKL5-206ENST00000623610 TMEM120AQ9BXJ8 343 aa9.24□□□□□ -0.93
CDKL5-206ENST00000623610 BHMT2Q9H2M3 363 aa9.24□□□□□ -0.93
CDKL5-206ENST00000623610 THAP9Q9H5L6 903 aa9.24□□□□□ -0.93
CDKL5-206ENST00000623610 NMRK1Q9NWW6 199 aa9.24□□□□□ -0.93
CDKL5-206ENST00000623610 ORC3Q9UBD5 711 aaPredicted RBP9.24□□□□□ -0.93
CDKL5-206ENST00000623610 RGPD2P0DJD1 1756 aa9.24□□□□□ -0.93
CDKL5-206ENST00000623610 NPC1O15118 1278 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 MAGEB3O15480 346 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 PRPSAP2O60256 369 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 GREM1O60565 184 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 RHOXF2BP0C7M4 288 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 PYGMP11217 842 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms