RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 PCDHB2Q9Y5E7 798 aa17.6■□□□□ 0.41
LDB3-208ENST00000623007 ZSWIM8A7E2V4 1837 aa17.6■□□□□ 0.41
LDB3-208ENST00000623007 ITGBL1O95965 494 aaPredicted RBP17.59■□□□□ 0.41
LDB3-208ENST00000623007 INSRRP14616 1297 aa17.59■□□□□ 0.41
LDB3-208ENST00000623007 USP8P40818 1118 aa17.59■□□□□ 0.41
LDB3-208ENST00000623007 ACOT2P49753 483 aa17.59■□□□□ 0.41
LDB3-208ENST00000623007 ZNF157P51786 506 aaPredicted RBP17.59■□□□□ 0.41
LDB3-208ENST00000623007 YWHAEP62258 255 aaKnown RBP17.59■□□□□ 0.41
LDB3-208ENST00000623007 CDR2Q01850 454 aa17.59■□□□□ 0.41
LDB3-208ENST00000623007 SREBF2Q12772 1141 aa17.59■□□□□ 0.41
LDB3-208ENST00000623007 MKRN3Q13064 507 aaKnown RBP17.59■□□□□ 0.41
LDB3-208ENST00000623007 MKRN4PQ13434 485 aaPredicted RBP17.59■□□□□ 0.41
LDB3-208ENST00000623007 DUOXA2Q1HG44 320 aa17.59■□□□□ 0.41
LDB3-208ENST00000623007 MORN1Q5T089 497 aa17.59■□□□□ 0.41
LDB3-208ENST00000623007 RASAL3Q86YV0 1011 aa17.59■□□□□ 0.41
LDB3-208ENST00000623007 MMGT1Q8N4V1 131 aa17.59■□□□□ 0.41
LDB3-208ENST00000623007 OR6J1Q8NGC5 347 aa17.59■□□□□ 0.41
LDB3-208ENST00000623007 AFG1LQ8WV93 481 aa17.59■□□□□ 0.41
LDB3-208ENST00000623007 SEMA4DQ92854 862 aa17.59■□□□□ 0.41
LDB3-208ENST00000623007 KREMEN1Q96MU8 473 aa17.59■□□□□ 0.41
LDB3-208ENST00000623007 PARD6BQ9BYG5 372 aa17.59■□□□□ 0.41
LDB3-208ENST00000623007 FAM124BQ9H5Z6 455 aaPredicted RBP17.59■□□□□ 0.41
LDB3-208ENST00000623007 SEPT11Q9NVA2 429 aaKnown RBP17.59■□□□□ 0.41
LDB3-208ENST00000623007 CNTNAP2Q9UHC6 1331 aa17.59■□□□□ 0.41
LDB3-208ENST00000623007 PHACTR2O75167 634 aa17.58■□□□□ 0.41
LDB3-208ENST00000623007 HLA-DRAP01903 254 aa17.58■□□□□ 0.41
LDB3-208ENST00000623007 CYP11B1P15538 503 aa17.58■□□□□ 0.41
LDB3-208ENST00000623007 ADCYAP1R1P41586 468 aa17.58■□□□□ 0.41
LDB3-208ENST00000623007 GPC5P78333 572 aa17.58■□□□□ 0.41
LDB3-208ENST00000623007 CST9Q5W186 159 aa17.58■□□□□ 0.41
LDB3-208ENST00000623007 OLFML2BQ68BL8 750 aa17.58■□□□□ 0.41
LDB3-208ENST00000623007 RGMBQ6NW40 437 aa17.58■□□□□ 0.41
LDB3-208ENST00000623007 PEX26Q7Z412 305 aa17.58■□□□□ 0.41
LDB3-208ENST00000623007 RPUSD2Q8IZ73 545 aaKnown RBP17.58■□□□□ 0.41
LDB3-208ENST00000623007 LINC01465Q8N7H1 131 aa17.58■□□□□ 0.41
LDB3-208ENST00000623007 LRRC57Q8N9N7 239 aa17.58■□□□□ 0.41
LDB3-208ENST00000623007 POP1Q99575 1024 aaKnown RBP17.58■□□□□ 0.41
LDB3-208ENST00000623007 C16orf70Q9BSU1 422 aa17.58■□□□□ 0.41
LDB3-208ENST00000623007 PACSIN1Q9BY11 444 aa17.58■□□□□ 0.41
LDB3-208ENST00000623007 CPSF3Q9UKF6 684 aaKnown RBP17.58■□□□□ 0.41
LDB3-208ENST00000623007 MYH10P35580 1976 aa17.58■□□□□ 0.4
LDB3-208ENST00000623007 A0A0U1RQG5 324 aaPredicted RBP17.58■□□□□ 0.4
LDB3-208ENST00000623007 INO80B-WBP1J3KQ70 363 aa17.58■□□□□ 0.4
LDB3-208ENST00000623007 B4GALT4O60513 344 aa17.58■□□□□ 0.4
LDB3-208ENST00000623007 MTA2O94776 668 aa17.58■□□□□ 0.4
LDB3-208ENST00000623007 MMP3P08254 477 aa17.58■□□□□ 0.4
LDB3-208ENST00000623007 MYBL1P10243 752 aa17.58■□□□□ 0.4
LDB3-208ENST00000623007 MCF2P10911 925 aa17.58■□□□□ 0.4
LDB3-208ENST00000623007 CLCN6P51797 869 aa17.58■□□□□ 0.4
LDB3-208ENST00000623007 TAF1CQ15572 869 aaPredicted RBP17.58■□□□□ 0.4
LDB3-208ENST00000623007 TMEM132AQ24JP5 1023 aa17.58■□□□□ 0.4
LDB3-208ENST00000623007 LRRC71Q8N4P6 559 aa17.58■□□□□ 0.4
LDB3-208ENST00000623007 CCDC102AQ96A19 550 aa17.58■□□□□ 0.4
LDB3-208ENST00000623007 NLRP4Q96MN2 994 aa17.58■□□□□ 0.4
LDB3-208ENST00000623007 INO80BQ9C086 356 aaPredicted RBP17.58■□□□□ 0.4
LDB3-208ENST00000623007 RNPEPQ9H4A4 650 aa17.58■□□□□ 0.4
LDB3-208ENST00000623007 ZFYVE28Q9HCC9 887 aa17.58■□□□□ 0.4
LDB3-208ENST00000623007 PDE11AQ9HCR9 933 aa17.58■□□□□ 0.4
LDB3-208ENST00000623007 PTPRHQ9HD43 1115 aa17.58■□□□□ 0.4
LDB3-208ENST00000623007 UVRAGQ9P2Y5 699 aa17.58■□□□□ 0.4
LDB3-208ENST00000623007 NOCTQ9UK39 431 aaKnown RBP17.58■□□□□ 0.4
LDB3-208ENST00000623007 AMFRQ9UKV5 643 aa17.58■□□□□ 0.4
LDB3-208ENST00000623007 MIF4GDA9UHW6 222 aaKnown RBP17.57■□□□□ 0.4
LDB3-208ENST00000623007 KIF4AO95239 1232 aa17.57■□□□□ 0.4
LDB3-208ENST00000623007 RGS2P41220 211 aa17.57■□□□□ 0.4
LDB3-208ENST00000623007 MBTD1Q05BQ5 628 aa17.57■□□□□ 0.4
LDB3-208ENST00000623007 DRP2Q13474 957 aa17.57■□□□□ 0.4
LDB3-208ENST00000623007 PPP2R5EQ16537 467 aa17.57■□□□□ 0.4
LDB3-208ENST00000623007 SGSM1Q2NKQ1 1148 aa17.57■□□□□ 0.4
LDB3-208ENST00000623007 ZNF568Q3ZCX4 644 aa17.57■□□□□ 0.4
LDB3-208ENST00000623007 TDRD10Q5VZ19 366 aaKnown RBP17.57■□□□□ 0.4
LDB3-208ENST00000623007 NT5DC4Q86YG4 428 aa17.57■□□□□ 0.4
LDB3-208ENST00000623007 ZNF516Q92618 1163 aa17.57■□□□□ 0.4
LDB3-208ENST00000623007 ANKRD36BP1Q96IX9 119 aa17.57■□□□□ 0.4
LDB3-208ENST00000623007 MMS19Q96T76 1030 aa17.57■□□□□ 0.4
LDB3-208ENST00000623007 NAP1L3Q99457 506 aaPredicted RBP17.57■□□□□ 0.4
LDB3-208ENST00000623007 LCMT1Q9UIC8 334 aa17.57■□□□□ 0.4
LDB3-208ENST00000623007 ZHX1Q9UKY1 873 aaPredicted RBP17.57■□□□□ 0.4
LDB3-208ENST00000623007 A6NJR5 290 aa17.56■□□□□ 0.4
LDB3-208ENST00000623007 CYP26A1O43174 497 aa17.56■□□□□ 0.4
LDB3-208ENST00000623007 FAM189A1O60320 539 aa17.56■□□□□ 0.4
LDB3-208ENST00000623007 TNNC2P02585 160 aa17.56■□□□□ 0.4
LDB3-208ENST00000623007 PNMA6AP0CW24 399 aaPredicted RBP17.56■□□□□ 0.4
LDB3-208ENST00000623007 SMPD1P17405 629 aa17.56■□□□□ 0.4
LDB3-208ENST00000623007 PPFIA1Q13136 1202 aa17.56■□□□□ 0.4
LDB3-208ENST00000623007 CUL2Q13617 745 aa17.56■□□□□ 0.4
LDB3-208ENST00000623007 NCOA4Q13772 614 aa17.56■□□□□ 0.4
LDB3-208ENST00000623007 C11orf63Q6NUN7 778 aa17.56■□□□□ 0.4
LDB3-208ENST00000623007 MTHFD1LQ6UB35 978 aa17.56■□□□□ 0.4
LDB3-208ENST00000623007 DAAM2Q86T65 1068 aa17.56■□□□□ 0.4
LDB3-208ENST00000623007 CD302Q8IX05 232 aa17.56■□□□□ 0.4
LDB3-208ENST00000623007 ZNF784Q8NCA9 323 aaPredicted RBP17.56■□□□□ 0.4
LDB3-208ENST00000623007 SPATA4Q8NEY3 305 aa17.56■□□□□ 0.4
LDB3-208ENST00000623007 OLIG1Q8TAK6 271 aa17.56■□□□□ 0.4
LDB3-208ENST00000623007 SLC35G2Q8TBE7 412 aa17.56■□□□□ 0.4
LDB3-208ENST00000623007 ZBTB45Q96K62 511 aaPredicted RBP17.56■□□□□ 0.4
LDB3-208ENST00000623007 CAPZA3Q96KX2 299 aa17.56■□□□□ 0.4
LDB3-208ENST00000623007 TOPORSQ9NS56 1045 aaPredicted RBP17.56■□□□□ 0.4
LDB3-208ENST00000623007 OGFRQ9NZT2 677 aa17.56■□□□□ 0.4
LDB3-208ENST00000623007 CNTN6Q9UQ52 1028 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms