RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 TRPC7Q9HCX4 862 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 SELENONQ9NZV5 590 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 PRELID1Q9Y255 219 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 CARD8Q9Y2G2 431 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 GPC6Q9Y625 555 aaPredicted RBP8.41□□□□□ -1.06
VPS11-209ENST00000622309 HEG1Q9ULI3 1381 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 NBPF26B4DH59 902 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 GH1P01241 217 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 FOSL1P15407 271 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 ZNF16P17020 682 aaPredicted RBP8.41□□□□□ -1.06
VPS11-209ENST00000622309 HOXA10P31260 410 aaPredicted RBP8.41□□□□□ -1.06
VPS11-209ENST00000622309 CLK1P49759 484 aaKnown RBP8.41□□□□□ -1.06
VPS11-209ENST00000622309 PDXDC2PQ6P474 469 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 PDXDC1Q6P996 788 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 CAPN12Q6ZSI9 719 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 ARHGAP24Q8N264 748 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 KIAA1958Q8N8K9 716 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 GIPC3Q8TF64 312 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 VPS50Q96JG6 964 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 ROPN1BQ9BZX4 212 aaPredicted RBP8.41□□□□□ -1.06
VPS11-209ENST00000622309 TLE6Q9H808 572 aa8.41□□□□□ -1.06
VPS11-209ENST00000622309 ROPN1Q9HAT0 212 aaPredicted RBP8.41□□□□□ -1.06
VPS11-209ENST00000622309 E9PBE3 544 aa8.4□□□□□ -1.06
VPS11-209ENST00000622309 TXNDC9O14530 226 aa8.4□□□□□ -1.06
VPS11-209ENST00000622309 TBC1D12O60347 775 aa8.4□□□□□ -1.06
VPS11-209ENST00000622309 ZWINTO95229 277 aa8.4□□□□□ -1.06
VPS11-209ENST00000622309 SERPING1P05155 500 aa8.4□□□□□ -1.06
VPS11-209ENST00000622309 CREB1P16220 341 aa8.4□□□□□ -1.06
VPS11-209ENST00000622309 CD53P19397 219 aa8.4□□□□□ -1.06
VPS11-209ENST00000622309 LPIN1Q14693 890 aa8.4□□□□□ -1.06
VPS11-209ENST00000622309 ASTE1Q2TB18 679 aaPredicted RBP8.4□□□□□ -1.06
VPS11-209ENST00000622309 MIIPQ5JXC2 388 aa8.4□□□□□ -1.06
VPS11-209ENST00000622309 MFSD5Q6N075 450 aa8.4□□□□□ -1.06
VPS11-209ENST00000622309 KLHDC10Q6PID8 442 aa8.4□□□□□ -1.06
VPS11-209ENST00000622309 PPP1R21Q6ZMI0 780 aa8.4□□□□□ -1.06
VPS11-209ENST00000622309 CCDC25Q86WR0 208 aa8.4□□□□□ -1.06
VPS11-209ENST00000622309 BBS5Q8N3I7 341 aa8.4□□□□□ -1.06
VPS11-209ENST00000622309 PIP4K2CQ8TBX8 421 aa8.4□□□□□ -1.06
VPS11-209ENST00000622309 FBXO25Q8TCJ0 367 aa8.4□□□□□ -1.06
VPS11-209ENST00000622309 P2RX5Q93086 422 aa8.4□□□□□ -1.06
VPS11-209ENST00000622309 OSBP2Q969R2 916 aa8.4□□□□□ -1.06
VPS11-209ENST00000622309 RUNDC3BQ96NL0 473 aa8.4□□□□□ -1.06
VPS11-209ENST00000622309 CYTH2Q99418 400 aa8.4□□□□□ -1.06
VPS11-209ENST00000622309 SENP7Q9BQF6 1050 aa8.4□□□□□ -1.06
VPS11-209ENST00000622309 BTBD10Q9BSF8 475 aa8.4□□□□□ -1.06
VPS11-209ENST00000622309 GOLPH3Q9H4A6 298 aa8.4□□□□□ -1.06
VPS11-209ENST00000622309 RGPD3A6NKT7 1758 aaPredicted RBP8.4□□□□□ -1.06
VPS11-209ENST00000622309 RGPD4Q7Z3J3 1758 aa8.4□□□□□ -1.06
VPS11-209ENST00000622309 EXOC3O60645 756 aa8.4□□□□□ -1.07
VPS11-209ENST00000622309 KATNA1O75449 491 aa8.4□□□□□ -1.07
VPS11-209ENST00000622309 CYP1A2P05177 515 aa8.4□□□□□ -1.07
VPS11-209ENST00000622309 IFIT1P09914 478 aaKnown RBP8.4□□□□□ -1.07
VPS11-209ENST00000622309 COL6A2P12110 1019 aa8.4□□□□□ -1.07
VPS11-209ENST00000622309 IFNAR1P17181 557 aa8.4□□□□□ -1.07
VPS11-209ENST00000622309 GTF2H1P32780 548 aa8.4□□□□□ -1.07
VPS11-209ENST00000622309 ARID5AQ03989 594 aa8.4□□□□□ -1.07
VPS11-209ENST00000622309 ASPHQ12797 758 aa8.4□□□□□ -1.07
VPS11-209ENST00000622309 SIM2Q14190 667 aaPredicted RBP8.4□□□□□ -1.07
VPS11-209ENST00000622309 PPP2R5EQ16537 467 aa8.4□□□□□ -1.07
VPS11-209ENST00000622309 COBLL1Q53SF7 1204 aa8.4□□□□□ -1.07
VPS11-209ENST00000622309 TMEM214Q6NUQ4 689 aaKnown RBP8.4□□□□□ -1.07
VPS11-209ENST00000622309 VSTM1Q6UX27 236 aa8.4□□□□□ -1.07
VPS11-209ENST00000622309 Q6ZNX1 250 aa8.4□□□□□ -1.07
VPS11-209ENST00000622309 RFX8Q6ZV50 586 aa8.4□□□□□ -1.07
VPS11-209ENST00000622309 FAM186BQ8IYM0 893 aa8.4□□□□□ -1.07
VPS11-209ENST00000622309 RPGRQ92834 1020 aaKnown RBP8.4□□□□□ -1.07
VPS11-209ENST00000622309 ZNF594Q96JF6 807 aaPredicted RBP8.4□□□□□ -1.07
VPS11-209ENST00000622309 TMEM87BQ96K49 555 aa8.4□□□□□ -1.07
VPS11-209ENST00000622309 TTC1Q99614 292 aa8.4□□□□□ -1.07
VPS11-209ENST00000622309 CGREF1Q99674 301 aa8.4□□□□□ -1.07
VPS11-209ENST00000622309 TANGO6Q9C0B7 1094 aa8.4□□□□□ -1.07
VPS11-209ENST00000622309 SAR1AQ9NR31 198 aa8.4□□□□□ -1.07
VPS11-209ENST00000622309 ATAD3AQ9NVI7 634 aa8.4□□□□□ -1.07
VPS11-209ENST00000622309 PHTF1Q9UMS5 762 aa8.4□□□□□ -1.07
VPS11-209ENST00000622309 DOLKQ9UPQ8 538 aa8.4□□□□□ -1.07
VPS11-209ENST00000622309 STARD13Q9Y3M8 1113 aa8.4□□□□□ -1.07
VPS11-209ENST00000622309 IQCA1LA6NCM1 817 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 RBAK-RBAKDNI3L0D1 243 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 PLSCR1O15162 318 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 GSC2O15499 205 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 DEXIO95424 95 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 GAS8O95995 478 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 IL2RBP14784 551 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 CPA3P15088 417 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 TAC1P20366 129 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 CCNE1P24864 410 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 GRIA2P42262 883 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 RPL5P46777 297 aaKnown RBP8.39□□□□□ -1.07
VPS11-209ENST00000622309 AP2B1P63010 937 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 UBE4AQ14139 1066 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 BCL2A1Q16548 175 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 EGFLAMQ63HQ2 1017 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 CCSAPQ6IQ19 270 aaPredicted RBP8.39□□□□□ -1.07
VPS11-209ENST00000622309 SNX32Q86XE0 403 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 ZSCAN29Q8IWY8 852 aaPredicted RBP8.39□□□□□ -1.07
VPS11-209ENST00000622309 IPCEF1Q8WWN9 437 aaPredicted RBP8.39□□□□□ -1.07
VPS11-209ENST00000622309 PHF12Q96QT6 1004 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 TUBB6Q9BUF5 446 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 USP29Q9HBJ7 922 aa8.39□□□□□ -1.07
VPS11-209ENST00000622309 THEGQ9P2T0 379 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms