RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 HOXC13P31276 330 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 GBP1P32455 592 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 VIPR2P41587 438 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 OR1G1P47890 313 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 PXNP49023 591 aaPredicted RBP2.68□□□□□ -1.98
CPNE3-211ENST00000621526 DNM2P50570 870 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 GPC3P51654 580 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 AFF1P51825 1210 aaKnown RBP2.68□□□□□ -1.98
CPNE3-211ENST00000621526 EPHA5P54756 1037 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 UCNP55089 124 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 GRM2Q14416 872 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 NBR1Q14596 966 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 RTP5Q14D33 572 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 SMAD1Q15797 465 aaKnown RBP2.68□□□□□ -1.98
CPNE3-211ENST00000621526 TAF1BQ53T94 588 aaPredicted RBP2.68□□□□□ -1.98
CPNE3-211ENST00000621526 ZKSCAN2Q63HK3 967 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 TWF2Q6IBS0 349 aaKnown RBP2.68□□□□□ -1.98
CPNE3-211ENST00000621526 SWSAP1Q6NVH7 229 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 MIS18BP1Q6P0N0 1132 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 FUT10Q6P4F1 479 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 TXNDC11Q6PKC3 985 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 PDZRN4Q6ZMN7 1036 aaPredicted RBP2.68□□□□□ -1.98
CPNE3-211ENST00000621526 LPCAT2Q7L5N7 544 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 ZNF410Q86VK4 478 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 RASSF3Q86WH2 238 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 TMPRSS12Q86WS5 348 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 YAF2Q8IY57 180 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 TCEAL8Q8IYN2 117 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 ZNF513Q8N8E2 541 aaPredicted RBP2.68□□□□□ -1.98
CPNE3-211ENST00000621526 PNPLA1Q8N8W4 532 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 OLIG1Q8TAK6 271 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 SMARCC2Q8TAQ2 1214 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 PIP4K2CQ8TBX8 421 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 FAM200AQ8TCP9 573 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 BAP1Q92560 729 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 FGF11Q92914 225 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 LPPQ93052 612 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 LIN37Q96GY3 246 aaPredicted RBP2.68□□□□□ -1.98
CPNE3-211ENST00000621526 CRELD1Q96HD1 420 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 FAM167AQ96KS9 214 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 ZNF512Q96ME7 567 aaPredicted RBP2.68□□□□□ -1.98
CPNE3-211ENST00000621526 ZSWIM3Q96MP5 696 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 FCRL3Q96P31 734 aaPredicted RBP2.68□□□□□ -1.98
CPNE3-211ENST00000621526 PSMG3-AS1Q96PY0 264 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 ZSCAN10Q96SZ4 725 aaPredicted RBP2.68□□□□□ -1.98
CPNE3-211ENST00000621526 GAD1Q99259 594 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 CDC6Q99741 560 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 MXRA8Q9BRK3 442 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 ZDHHC5Q9C0B5 715 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 NRSN2Q9GZP1 204 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 GBP3Q9H0R5 595 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 FAM124BQ9H5Z6 455 aaPredicted RBP2.68□□□□□ -1.98
CPNE3-211ENST00000621526 LY9Q9HBG7 655 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 CAPN10Q9HC96 672 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 MRS2Q9HD23 443 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 ZNF302Q9NR11 478 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 HELLSQ9NRZ9 838 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 TOMM22Q9NS69 142 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 TBC1D22BQ9NU19 505 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 TMEM74BQ9NUR3 256 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 THG1LQ9NWX6 298 aaKnown RBP2.68□□□□□ -1.98
CPNE3-211ENST00000621526 SEPT3Q9UH03 358 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 PILRBQ9UKJ0 227 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 ADAM28Q9UKQ2 775 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 POLIQ9UNA4 740 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 AKT3Q9Y243 479 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 INPP5FQ9Y2H2 1132 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 GIT1Q9Y2X7 761 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 PCDHGB2Q9Y5G2 931 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 BACE2Q9Y5Z0 518 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 FBN2P35556 2912 aa2.68□□□□□ -1.98
CPNE3-211ENST00000621526 CACNA1EQ15878 2313 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 IGKV6-21A0A0C4DH24 114 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 A0A1W2PQD8 194 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 CLEC18AA5D8T8 446 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 ARL5CA6NH57 179 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 MEIS3P2A8K0S8 358 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 IPO5O00410 1097 aaKnown RBP2.67□□□□□ -1.98
CPNE3-211ENST00000621526 TERTO14746 1132 aaKnown RBP2.67□□□□□ -1.98
CPNE3-211ENST00000621526 BACH1O14867 736 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 DHX15O43143 795 aaKnown RBP2.67□□□□□ -1.98
CPNE3-211ENST00000621526 ASAP2O43150 1006 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 SLC28A2O43868 658 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 MOSPD3O75425 235 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 FOSP01100 380 aaPredicted RBP2.67□□□□□ -1.98
CPNE3-211ENST00000621526 POMCP01189 267 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 C1SP09871 688 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 ITGA4P13612 1032 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 HLA-EP13747 358 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 ATF2P15336 505 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 CR2P20023 1033 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 AXLP30530 894 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 HOXA11P31270 313 aaPredicted RBP2.67□□□□□ -1.98
CPNE3-211ENST00000621526 ELF1P32519 619 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 OR1D2P34982 312 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 P2RY2P41231 377 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 MAPK8P45983 427 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 DHPSP49366 369 aaPredicted RBP2.67□□□□□ -1.98
CPNE3-211ENST00000621526 GALK1P51570 392 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 DGKEP52429 567 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms