RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 CCDC94Q9BW85 323 aaPredicted RBP14.85□□□□□ -0.03
NEK3-210ENST00000620675 YBX2Q9Y2T7 364 aaKnown RBP14.85□□□□□ -0.03
NEK3-210ENST00000620675 PRUNE2Q8WUY3 3088 aa14.84□□□□□ -0.03
NEK3-210ENST00000620675 TTC26A0AVF1 554 aa14.84□□□□□ -0.03
NEK3-210ENST00000620675 EXOC3O60645 756 aa14.84□□□□□ -0.03
NEK3-210ENST00000620675 CLTAP09496 248 aa14.84□□□□□ -0.03
NEK3-210ENST00000620675 SKIP12755 728 aa14.84□□□□□ -0.03
NEK3-210ENST00000620675 PBX3P40426 434 aa14.84□□□□□ -0.03
NEK3-210ENST00000620675 GUCY2FP51841 1108 aa14.84□□□□□ -0.03
NEK3-210ENST00000620675 HTRA4P83105 476 aaPredicted RBP14.84□□□□□ -0.03
NEK3-210ENST00000620675 PRPF38BQ5VTL8 546 aaKnown RBP14.84□□□□□ -0.03
NEK3-210ENST00000620675 ZNF280BQ86YH2 543 aa14.84□□□□□ -0.03
NEK3-210ENST00000620675 SLC9A9Q8IVB4 645 aa14.84□□□□□ -0.03
NEK3-210ENST00000620675 RABGGTAQ92696 567 aa14.84□□□□□ -0.03
NEK3-210ENST00000620675 PGBD4Q96DM1 585 aa14.84□□□□□ -0.03
NEK3-210ENST00000620675 YME1L1Q96TA2 773 aa14.84□□□□□ -0.03
NEK3-210ENST00000620675 POP1Q99575 1024 aaKnown RBP14.84□□□□□ -0.03
NEK3-210ENST00000620675 ZBED2Q9BTP6 218 aa14.84□□□□□ -0.03
NEK3-210ENST00000620675 MTIF3Q9H2K0 278 aaKnown RBP14.84□□□□□ -0.03
NEK3-210ENST00000620675 GOLGA2P5Q9HBQ8 144 aa14.84□□□□□ -0.03
NEK3-210ENST00000620675 PDE11AQ9HCR9 933 aa14.84□□□□□ -0.03
NEK3-210ENST00000620675 PLXNA4Q9HCM2 1894 aa14.84□□□□□ -0.03
NEK3-210ENST00000620675 TLL1O43897 1013 aa14.83□□□□□ -0.03
NEK3-210ENST00000620675 DDHD2O94830 711 aa14.83□□□□□ -0.03
NEK3-210ENST00000620675 SOX4Q06945 474 aaPredicted RBP14.83□□□□□ -0.03
NEK3-210ENST00000620675 EDRF1Q3B7T1 1238 aa14.83□□□□□ -0.03
NEK3-210ENST00000620675 BRSK2Q8IWQ3 736 aa14.83□□□□□ -0.03
NEK3-210ENST00000620675 ZC3H3Q8IXZ2 948 aaKnown RBP14.83□□□□□ -0.03
NEK3-210ENST00000620675 EFCAB13Q8IY85 973 aa14.83□□□□□ -0.03
NEK3-210ENST00000620675 GOLGA5Q8TBA6 731 aa14.83□□□□□ -0.03
NEK3-210ENST00000620675 PHOSPHO2Q8TCD6 241 aa14.83□□□□□ -0.03
NEK3-210ENST00000620675 C18orf25Q96B23 403 aaPredicted RBP14.83□□□□□ -0.03
NEK3-210ENST00000620675 PBX4Q9BYU1 374 aa14.83□□□□□ -0.03
NEK3-210ENST00000620675 RPF1Q9H9Y2 349 aaKnown RBP14.83□□□□□ -0.03
NEK3-210ENST00000620675 TBC1D13Q9NVG8 400 aa14.83□□□□□ -0.03
NEK3-210ENST00000620675 ANO10Q9NW15 660 aa14.83□□□□□ -0.03
NEK3-210ENST00000620675 RBAKQ9NYW8 714 aaPredicted RBP14.83□□□□□ -0.03
NEK3-210ENST00000620675 RWDD2AQ9UIY3 292 aa14.83□□□□□ -0.03
NEK3-210ENST00000620675 GIT1Q9Y2X7 761 aa14.83□□□□□ -0.03
NEK3-210ENST00000620675 SMIM28A0A1B0GU29 152 aa14.83□□□□□ -0.04
NEK3-210ENST00000620675 F8W810 466 aa14.83□□□□□ -0.04
NEK3-210ENST00000620675 NFICP08651 508 aa14.83□□□□□ -0.04
NEK3-210ENST00000620675 LINC00271P0C7V0 271 aa14.83□□□□□ -0.04
NEK3-210ENST00000620675 SNRPFP62306 86 aaKnown RBP14.83□□□□□ -0.04
NEK3-210ENST00000620675 DLG4P78352 724 aa14.83□□□□□ -0.04
NEK3-210ENST00000620675 LRRC63Q05C16 580 aa14.83□□□□□ -0.04
NEK3-210ENST00000620675 NAB2Q15742 525 aa14.83□□□□□ -0.04
NEK3-210ENST00000620675 NOMO2Q5JPE7 1267 aa14.83□□□□□ -0.04
NEK3-210ENST00000620675 GLB1LQ6UWU2 654 aa14.83□□□□□ -0.04
NEK3-210ENST00000620675 PAAF1Q9BRP4 392 aa14.83□□□□□ -0.04
NEK3-210ENST00000620675 GTPBP4Q9BZE4 634 aaKnown RBP14.83□□□□□ -0.04
NEK3-210ENST00000620675 TOPORSQ9NS56 1045 aaPredicted RBP14.83□□□□□ -0.04
NEK3-210ENST00000620675 CGNQ9P2M7 1197 aaKnown RBP14.83□□□□□ -0.04
NEK3-210ENST00000620675 DNAJB4Q9UDY4 337 aa14.83□□□□□ -0.04
NEK3-210ENST00000620675 MRPL42Q9Y6G3 142 aaKnown RBP14.83□□□□□ -0.04
NEK3-210ENST00000620675 ATG2AQ2TAZ0 1938 aa14.82□□□□□ -0.04
NEK3-210ENST00000620675 CA3P07451 260 aa14.82□□□□□ -0.04
NEK3-210ENST00000620675 CYP24A1Q07973 514 aa14.82□□□□□ -0.04
NEK3-210ENST00000620675 NFIL3Q16649 462 aa14.82□□□□□ -0.04
NEK3-210ENST00000620675 XKR4Q5GH76 650 aa14.82□□□□□ -0.04
NEK3-210ENST00000620675 JADE1Q6IE81 842 aa14.82□□□□□ -0.04
NEK3-210ENST00000620675 APBB1IPQ7Z5R6 666 aaPredicted RBP14.82□□□□□ -0.04
NEK3-210ENST00000620675 IRF2BP1Q8IU81 584 aa14.82□□□□□ -0.04
NEK3-210ENST00000620675 CSGALNACT2Q8N6G5 542 aa14.82□□□□□ -0.04
NEK3-210ENST00000620675 TMEM174Q8WUU8 243 aa14.82□□□□□ -0.04
NEK3-210ENST00000620675 CCDC127Q96BQ5 260 aa14.82□□□□□ -0.04
NEK3-210ENST00000620675 PPP1R10Q96QC0 940 aaKnown RBP14.82□□□□□ -0.04
NEK3-210ENST00000620675 RAD9AQ99638 391 aa14.82□□□□□ -0.04
NEK3-210ENST00000620675 TSG101Q99816 390 aa14.82□□□□□ -0.04
NEK3-210ENST00000620675 SRRTQ9BXP5 876 aaKnown RBP14.82□□□□□ -0.04
NEK3-210ENST00000620675 TMEM117Q9H0C3 514 aa14.82□□□□□ -0.04
NEK3-210ENST00000620675 TUBGCP4Q9UGJ1 667 aa14.82□□□□□ -0.04
NEK3-210ENST00000620675 VWA8A3KMH1 1905 aa14.82□□□□□ -0.04
NEK3-210ENST00000620675 ZNF233A6NK53 670 aa14.81□□□□□ -0.04
NEK3-210ENST00000620675 CCDC192P0DO97 292 aa14.81□□□□□ -0.04
NEK3-210ENST00000620675 YARSP54577 528 aaKnown RBP14.81□□□□□ -0.04
NEK3-210ENST00000620675 FKBP3Q00688 224 aaKnown RBP14.81□□□□□ -0.04
NEK3-210ENST00000620675 BTG3Q14201 252 aaPredicted RBP14.81□□□□□ -0.04
NEK3-210ENST00000620675 C1orf220Q5T0J3 134 aa14.81□□□□□ -0.04
NEK3-210ENST00000620675 ABI1Q8IZP0 508 aa14.81□□□□□ -0.04
NEK3-210ENST00000620675 BORCS6Q96GS4 357 aa14.81□□□□□ -0.04
NEK3-210ENST00000620675 CWH43Q9H720 699 aa14.81□□□□□ -0.04
NEK3-210ENST00000620675 SAMSN1Q9NSI8 373 aaKnown RBP14.81□□□□□ -0.04
NEK3-210ENST00000620675 CNTN3Q9P232 1028 aa14.81□□□□□ -0.04
NEK3-210ENST00000620675 SOX1O00570 391 aaPredicted RBP14.81□□□□□ -0.04
NEK3-210ENST00000620675 INPPL1O15357 1258 aa14.81□□□□□ -0.04
NEK3-210ENST00000620675 LETM1O95202 739 aaPredicted RBP14.81□□□□□ -0.04
NEK3-210ENST00000620675 LDHAP00338 332 aaKnown RBP14.81□□□□□ -0.04
NEK3-210ENST00000620675 PPP1R2P41236 205 aa14.81□□□□□ -0.04
NEK3-210ENST00000620675 HACE1Q8IYU2 909 aa14.81□□□□□ -0.04
NEK3-210ENST00000620675 OR5B17Q8NGF7 314 aa14.81□□□□□ -0.04
NEK3-210ENST00000620675 MFSD14AQ96MC6 490 aa14.81□□□□□ -0.04
NEK3-210ENST00000620675 NRDE2Q9H7Z3 1164 aa14.81□□□□□ -0.04
NEK3-210ENST00000620675 INSL6Q9Y581 213 aa14.81□□□□□ -0.04
NEK3-210ENST00000620675 SPTBN5Q9NRC6 3674 aaKnown RBP14.81□□□□□ -0.04
NEK3-210ENST00000620675 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.8□□□□□ -0.04
NEK3-210ENST00000620675 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.8□□□□□ -0.04
NEK3-210ENST00000620675 BICDL2A1A5D9 508 aa14.8□□□□□ -0.04
NEK3-210ENST00000620675 NT5C1B-RDH14C9J2C7 533 aa14.8□□□□□ -0.04
NEK3-210ENST00000620675 CETN3O15182 167 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms