RNA–Protein interactions for RNA: ENST00000618361.4

CBWD1-227, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-227ENST00000618361 CD44P16070 742 aaKnown RBP8.67□□□□□ -1.02
CBWD1-227ENST00000618361 FCARP24071 287 aa8.67□□□□□ -1.02
CBWD1-227ENST00000618361 CYP3A7P24462 503 aa8.67□□□□□ -1.02
CBWD1-227ENST00000618361 MYH9P35579 1960 aaKnown RBP8.67□□□□□ -1.02
CBWD1-227ENST00000618361 FNTBP49356 437 aa8.67□□□□□ -1.02
CBWD1-227ENST00000618361 PTENP60484 403 aa8.67□□□□□ -1.02
CBWD1-227ENST00000618361 SATB1Q01826 763 aa8.67□□□□□ -1.02
CBWD1-227ENST00000618361 PTGDRQ13258 359 aa8.67□□□□□ -1.02
CBWD1-227ENST00000618361 TUSC3Q13454 348 aa8.67□□□□□ -1.02
CBWD1-227ENST00000618361 LRRC32Q14392 662 aa8.67□□□□□ -1.02
CBWD1-227ENST00000618361 MXD4Q14582 209 aaPredicted RBP8.67□□□□□ -1.02
CBWD1-227ENST00000618361 NECTIN1Q15223 517 aa8.67□□□□□ -1.02
CBWD1-227ENST00000618361 STPG1Q5TH74 334 aa8.67□□□□□ -1.02
CBWD1-227ENST00000618361 FERMT3Q86UX7 667 aa8.67□□□□□ -1.02
CBWD1-227ENST00000618361 FAM160A2Q8N612 972 aaPredicted RBP8.67□□□□□ -1.02
CBWD1-227ENST00000618361 RNF149Q8NC42 400 aa8.67□□□□□ -1.02
CBWD1-227ENST00000618361 DEPDC1BQ8WUY9 529 aa8.67□□□□□ -1.02
CBWD1-227ENST00000618361 MCRS1Q96EZ8 462 aa8.67□□□□□ -1.02
CBWD1-227ENST00000618361 SH2D3AQ9BRG2 576 aa8.67□□□□□ -1.02
CBWD1-227ENST00000618361 LRRC2Q9BYS8 371 aa8.67□□□□□ -1.02
CBWD1-227ENST00000618361 C22orf23Q9BZE7 217 aa8.67□□□□□ -1.02
CBWD1-227ENST00000618361 TRIM6Q9C030 488 aaPredicted RBP8.67□□□□□ -1.02
CBWD1-227ENST00000618361 ZNF334Q9HCZ1 680 aaPredicted RBP8.67□□□□□ -1.02
CBWD1-227ENST00000618361 BRPF3Q9ULD4 1205 aa8.67□□□□□ -1.02
CBWD1-227ENST00000618361 HES2Q9Y543 173 aa8.67□□□□□ -1.02
CBWD1-227ENST00000618361 PCDHGA5Q9Y5G8 931 aa8.67□□□□□ -1.02
CBWD1-227ENST00000618361 MYH15Q9Y2K3 1946 aa8.66□□□□□ -1.02
CBWD1-227ENST00000618361 MTCL1Q9Y4B5 1905 aaKnown RBP8.66□□□□□ -1.02
CBWD1-227ENST00000618361 CCDC163A0A0D9SF12 145 aa8.66□□□□□ -1.02
CBWD1-227ENST00000618361 ARHGEF37A1IGU5 675 aa8.66□□□□□ -1.02
CBWD1-227ENST00000618361 GOLGA8AA7E2F4 631 aa8.66□□□□□ -1.02
CBWD1-227ENST00000618361 GOLGA8BA8MQT2 603 aa8.66□□□□□ -1.02
CBWD1-227ENST00000618361 K7ESF4 209 aa8.66□□□□□ -1.02
CBWD1-227ENST00000618361 ZNF197O14709 1029 aa8.66□□□□□ -1.02
CBWD1-227ENST00000618361 ADAMTS3O15072 1205 aa8.66□□□□□ -1.02
CBWD1-227ENST00000618361 EPN2O95208 641 aa8.66□□□□□ -1.02
CBWD1-227ENST00000618361 PTPN2P17706 415 aa8.66□□□□□ -1.02
CBWD1-227ENST00000618361 PSMC3P17980 439 aa8.66□□□□□ -1.02
CBWD1-227ENST00000618361 CDC27P30260 824 aa8.66□□□□□ -1.02
CBWD1-227ENST00000618361 QARSP47897 775 aaKnown RBP8.66□□□□□ -1.02
CBWD1-227ENST00000618361 EXOSC10Q01780 885 aaKnown RBP8.66□□□□□ -1.02
CBWD1-227ENST00000618361 GAS6Q14393 721 aa8.66□□□□□ -1.02
CBWD1-227ENST00000618361 PRSS36Q5K4E3 855 aa8.66□□□□□ -1.02
CBWD1-227ENST00000618361 FAM171A1Q5VUB5 890 aa8.66□□□□□ -1.02
CBWD1-227ENST00000618361 CREB3L3Q68CJ9 461 aa8.66□□□□□ -1.02
CBWD1-227ENST00000618361 MOXD1Q6UVY6 613 aa8.66□□□□□ -1.02
CBWD1-227ENST00000618361 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.66□□□□□ -1.02
CBWD1-227ENST00000618361 WDR5BQ86VZ2 330 aa8.66□□□□□ -1.02
CBWD1-227ENST00000618361 CCDC148Q8NFR7 591 aa8.66□□□□□ -1.02
CBWD1-227ENST00000618361 TMEM143Q96AN5 459 aa8.66□□□□□ -1.02
CBWD1-227ENST00000618361 CEP170P1Q96L14 293 aa8.66□□□□□ -1.02
CBWD1-227ENST00000618361 TMEM121BQ9BXQ6 578 aaPredicted RBP8.66□□□□□ -1.02
CBWD1-227ENST00000618361 NFKBIZQ9BYH8 718 aa8.66□□□□□ -1.02
CBWD1-227ENST00000618361 RXFP3Q9NSD7 469 aa8.66□□□□□ -1.02
CBWD1-227ENST00000618361 HCFC1R1Q9NWW0 138 aa8.66□□□□□ -1.02
CBWD1-227ENST00000618361 MTRRQ9UBK8 725 aa8.66□□□□□ -1.02
CBWD1-227ENST00000618361 LHX6Q9UPM6 363 aa8.66□□□□□ -1.02
CBWD1-227ENST00000618361 BACE2Q9Y5Z0 518 aa8.66□□□□□ -1.02
CBWD1-227ENST00000618361 PIAS3Q9Y6X2 628 aa8.66□□□□□ -1.02
CBWD1-227ENST00000618361 CNOT1A5YKK6 2376 aaKnown RBP8.65□□□□□ -1.02
CBWD1-227ENST00000618361 SRRM3A6NNA2 597 aaPredicted RBP8.65□□□□□ -1.02
CBWD1-227ENST00000618361 AXIN1O15169 862 aa8.65□□□□□ -1.02
CBWD1-227ENST00000618361 ADAM12O43184 909 aa8.65□□□□□ -1.02
CBWD1-227ENST00000618361 PRPF3O43395 683 aaKnown RBP8.65□□□□□ -1.02
CBWD1-227ENST00000618361 P4HBP07237 508 aaKnown RBP8.65□□□□□ -1.02
CBWD1-227ENST00000618361 FGFR3P22607 806 aa8.65□□□□□ -1.02
CBWD1-227ENST00000618361 OR1D2P34982 312 aa8.65□□□□□ -1.02
CBWD1-227ENST00000618361 RAP1GAPP47736 663 aa8.65□□□□□ -1.02
CBWD1-227ENST00000618361 NPEPPSP55786 919 aa8.65□□□□□ -1.02
CBWD1-227ENST00000618361 SRSF5Q13243 272 aaKnown RBP8.65□□□□□ -1.02
CBWD1-227ENST00000618361 PPP2R5CQ13362 524 aa8.65□□□□□ -1.02
CBWD1-227ENST00000618361 TFDP1Q14186 410 aa8.65□□□□□ -1.02
CBWD1-227ENST00000618361 AMHR2Q16671 573 aa8.65□□□□□ -1.02
CBWD1-227ENST00000618361 SLC5A9Q2M3M2 681 aa8.65□□□□□ -1.02
CBWD1-227ENST00000618361 FAM78AQ5JUQ0 283 aa8.65□□□□□ -1.02
CBWD1-227ENST00000618361 DGKKQ5KSL6 1271 aa8.65□□□□□ -1.02
CBWD1-227ENST00000618361 PLA2G2CQ5R387 149 aa8.65□□□□□ -1.02
CBWD1-227ENST00000618361 PLA2G4FQ68DD2 849 aa8.65□□□□□ -1.02
CBWD1-227ENST00000618361 PSAPL1Q6NUJ1 521 aa8.65□□□□□ -1.02
CBWD1-227ENST00000618361 DHX32Q7L7V1 743 aaKnown RBP8.65□□□□□ -1.02
CBWD1-227ENST00000618361 OTUD6AQ7L8S5 288 aa8.65□□□□□ -1.02
CBWD1-227ENST00000618361 CEP57Q86XR8 500 aa8.65□□□□□ -1.02
CBWD1-227ENST00000618361 C4orf19Q8IY42 314 aa8.65□□□□□ -1.02
CBWD1-227ENST00000618361 SYNPOQ8N3V7 929 aa8.65□□□□□ -1.02
CBWD1-227ENST00000618361 ETNPPLQ8TBG4 499 aa8.65□□□□□ -1.02
CBWD1-227ENST00000618361 ING5Q8WYH8 240 aa8.65□□□□□ -1.02
CBWD1-227ENST00000618361 E2F7Q96AV8 911 aa8.65□□□□□ -1.02
CBWD1-227ENST00000618361 ASB16Q96NS5 453 aa8.65□□□□□ -1.02
CBWD1-227ENST00000618361 APOL6Q9BWW8 343 aa8.65□□□□□ -1.02
CBWD1-227ENST00000618361 LSG1Q9H089 658 aaKnown RBP8.65□□□□□ -1.02
CBWD1-227ENST00000618361 ARRDC1-AS1Q9H2J1 176 aa8.65□□□□□ -1.02
CBWD1-227ENST00000618361 NXF3Q9H4D5 531 aaKnown RBP8.65□□□□□ -1.02
CBWD1-227ENST00000618361 C8orf33Q9H7E9 229 aaPredicted RBP8.65□□□□□ -1.02
CBWD1-227ENST00000618361 TRPV4Q9HBA0 871 aa8.65□□□□□ -1.02
CBWD1-227ENST00000618361 WASF3Q9UPY6 502 aa8.65□□□□□ -1.02
CBWD1-227ENST00000618361 ASPMQ8IZT6 3477 aa8.64□□□□□ -1.03
CBWD1-227ENST00000618361 A0A1B0GUA9 196 aa8.64□□□□□ -1.03
CBWD1-227ENST00000618361 TMEM189-UBE2V1I3L0A0 370 aa8.64□□□□□ -1.03
CBWD1-227ENST00000618361 INO80B-WBP1J3KQ70 363 aa8.64□□□□□ -1.03
CBWD1-227ENST00000618361 ARNTLO00327 626 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms