RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 LGR5O75473 907 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 EYA4O95677 639 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 GLMNQ92990 594 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 PDCD2LQ9BRP1 358 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 MAGEB5Q9BZ81 275 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 IFNKQ9P0W0 207 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 KLHL8Q9P2G9 620 aaPredicted RBP11.62□□□□□ -0.55
POLR2A-209ENST00000617998 ZNF148Q9UQR1 794 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 KCPQ6ZWJ8 1503 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 PFKMP08237 780 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 GCLMP48507 274 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 DYNLT1P63172 113 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 PLCL1Q15111 1095 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 DARS2Q6PI48 645 aaKnown RBP11.62□□□□□ -0.55
POLR2A-209ENST00000617998 PGLYRP2Q96PD5 576 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 TGS1Q96RS0 853 aaKnown RBP11.62□□□□□ -0.55
POLR2A-209ENST00000617998 DNAJC7Q99615 494 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 BCL2L12Q9HB09 334 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 HDAC6Q9UBN7 1215 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 KRT1P04264 644 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 GARSP41250 739 aaKnown RBP11.62□□□□□ -0.55
POLR2A-209ENST00000617998 UVSSAQ2YD98 709 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 PCNX4Q63HM2 1172 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 ARL6IP4Q66PJ3 421 aaKnown RBP11.62□□□□□ -0.55
POLR2A-209ENST00000617998 CDC26Q8NHZ8 85 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 HDAC11Q96DB2 347 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 CAPZA3Q96KX2 299 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.62□□□□□ -0.55
POLR2A-209ENST00000617998 CAMTA1Q9Y6Y1 1673 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 KCNJ18B7U540 433 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 F5H5T6 163 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 EIF3DO15371 548 aaKnown RBP eCLIP11.62□□□□□ -0.556e-6■■□□□ 11.9
POLR2A-209ENST00000617998 SERPIND1P05546 499 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 SULT1E1P49888 294 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 KCNJ12Q14500 433 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 PPP4R3CPQ6ZMV5 832 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 FRA10AC1Q70Z53 315 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 HPS5Q9UPZ3 1129 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 MROH1Q8NDA8 1641 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 NCK2O43639 380 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 FGF19O95750 216 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 ATP5BP06576 529 aaKnown RBP11.62□□□□□ -0.55
POLR2A-209ENST00000617998 GIPC2Q8TF65 315 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 TBC1D32Q96NH3 1257 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 SMPD4Q9NXE4 827 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 RAPH1Q70E73 1250 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 OTOP1Q7RTM1 612 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 ZNF410Q86VK4 478 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 ZWILCHQ9H900 591 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 SARS2Q9NP81 518 aaKnown RBP11.62□□□□□ -0.55
POLR2A-209ENST00000617998 NDFIP2Q9NV92 336 aa11.62□□□□□ -0.55
POLR2A-209ENST00000617998 AFF4Q9UHB7 1163 aaKnown RBP11.62□□□□□ -0.55
POLR2A-209ENST00000617998 CAPN2P17655 700 aa11.61□□□□□ -0.55
POLR2A-209ENST00000617998 TRIM60Q495X7 471 aa11.61□□□□□ -0.55
POLR2A-209ENST00000617998 SLC7A14Q8TBB6 771 aa11.61□□□□□ -0.55
POLR2A-209ENST00000617998 DHX38Q92620 1227 aaKnown RBP11.61□□□□□ -0.55
POLR2A-209ENST00000617998 KRT12Q99456 494 aa11.61□□□□□ -0.55
POLR2A-209ENST00000617998 BCO2Q9BYV7 579 aa11.61□□□□□ -0.55
POLR2A-209ENST00000617998 CELF4Q9BZC1 486 aaKnown RBP11.61□□□□□ -0.55
POLR2A-209ENST00000617998 SALL1Q9NSC2 1324 aa11.61□□□□□ -0.55
POLR2A-209ENST00000617998 E5RI56 91 aa11.61□□□□□ -0.55
POLR2A-209ENST00000617998 SLC2A3P11169 496 aa11.61□□□□□ -0.55
POLR2A-209ENST00000617998 PAMP19021 973 aa11.61□□□□□ -0.55
POLR2A-209ENST00000617998 LHX1P48742 406 aa11.61□□□□□ -0.55
POLR2A-209ENST00000617998 HIRAP54198 1017 aaPredicted RBP11.61□□□□□ -0.55
POLR2A-209ENST00000617998 SLC30A10Q6XR72 485 aa11.61□□□□□ -0.55
POLR2A-209ENST00000617998 DCLK2Q8N568 766 aa11.61□□□□□ -0.55
POLR2A-209ENST00000617998 TLR8Q9NR97 1041 aaKnown RBP11.61□□□□□ -0.55
POLR2A-209ENST00000617998 NFE2L3Q9Y4A8 694 aa11.61□□□□□ -0.55
POLR2A-209ENST00000617998 FRMD3A2A2Y4 597 aa11.61□□□□□ -0.55
POLR2A-209ENST00000617998 CTAGE9A4FU28 777 aa11.61□□□□□ -0.55
POLR2A-209ENST00000617998 EIF3CLB5ME19 914 aaKnown RBP11.61□□□□□ -0.55
POLR2A-209ENST00000617998 CENPCQ03188 943 aa11.61□□□□□ -0.55
POLR2A-209ENST00000617998 SZRD1Q7Z422 152 aa11.61□□□□□ -0.55
POLR2A-209ENST00000617998 JAMLQ86YT9 394 aa11.61□□□□□ -0.55
POLR2A-209ENST00000617998 EIF3CQ99613 913 aaKnown RBP11.61□□□□□ -0.55
POLR2A-209ENST00000617998 ARVCFO00192 962 aa11.61□□□□□ -0.55
POLR2A-209ENST00000617998 CEP104O60308 925 aa11.61□□□□□ -0.55
POLR2A-209ENST00000617998 PFKFB1P16118 471 aa11.61□□□□□ -0.55
POLR2A-209ENST00000617998 FGFR4P22455 802 aa11.61□□□□□ -0.55
POLR2A-209ENST00000617998 RCAN1P53805 252 aa11.61□□□□□ -0.55
POLR2A-209ENST00000617998 AFAP1L1Q8TED9 768 aa11.61□□□□□ -0.55
POLR2A-209ENST00000617998 EEF2KMTQ96G04 330 aa11.61□□□□□ -0.55
POLR2A-209ENST00000617998 SENP2Q9HC62 589 aa11.61□□□□□ -0.55
POLR2A-209ENST00000617998 KANSL1LA0AUZ9 987 aa11.61□□□□□ -0.55
POLR2A-209ENST00000617998 MMP3P08254 477 aa11.61□□□□□ -0.55
POLR2A-209ENST00000617998 CYP26C1Q6V0L0 522 aa11.61□□□□□ -0.55
POLR2A-209ENST00000617998 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.61□□□□□ -0.55
POLR2A-209ENST00000617998 SCLYQ96I15 445 aa11.61□□□□□ -0.55
POLR2A-209ENST00000617998 HPDLQ96IR7 371 aa11.61□□□□□ -0.55
POLR2A-209ENST00000617998 NUDCD1Q96RS6 583 aa11.61□□□□□ -0.55
POLR2A-209ENST00000617998 TRIM54Q9BYV2 358 aa11.61□□□□□ -0.55
POLR2A-209ENST00000617998 DHPSP49366 369 aaPredicted RBP11.6□□□□□ -0.55
POLR2A-209ENST00000617998 VAMP7P51809 220 aa11.6□□□□□ -0.55
POLR2A-209ENST00000617998 ACLYP53396 1101 aa11.6□□□□□ -0.55
POLR2A-209ENST00000617998 ANKS3Q6ZW76 656 aa11.6□□□□□ -0.55
POLR2A-209ENST00000617998 NT5C1AQ9BXI3 368 aa11.6□□□□□ -0.55
POLR2A-209ENST00000617998 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.6□□□□□ -0.55
POLR2A-209ENST00000617998 FAM198AQ9UFP1 575 aa11.6□□□□□ -0.55
POLR2A-209ENST00000617998 SLC13A4Q9UKG4 626 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms