RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 TSHZ1Q6ZSZ6 1077 aa18.16■□□□□ 0.5
TRAPPC3-210ENST00000617904 C16orf59Q7L2K0 433 aa18.16■□□□□ 0.5
TRAPPC3-210ENST00000617904 TAS1R3Q7RTX0 852 aa18.16■□□□□ 0.5
TRAPPC3-210ENST00000617904 TMEM139Q8IV31 216 aa18.16■□□□□ 0.5
TRAPPC3-210ENST00000617904 FAM126BQ8IXS8 530 aa18.16■□□□□ 0.5
TRAPPC3-210ENST00000617904 PARD3BQ8TEW8 1205 aa18.16■□□□□ 0.5
TRAPPC3-210ENST00000617904 CCDC127Q96BQ5 260 aa18.16■□□□□ 0.5
TRAPPC3-210ENST00000617904 ACO2Q99798 780 aaKnown RBP18.16■□□□□ 0.5
TRAPPC3-210ENST00000617904 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.16■□□□□ 0.51e-7■■■■■ 27.7
TRAPPC3-210ENST00000617904 INTS2Q9H0H0 1204 aaKnown RBP18.16■□□□□ 0.5
TRAPPC3-210ENST00000617904 NLRC4Q9NPP4 1024 aa18.16■□□□□ 0.5
TRAPPC3-210ENST00000617904 TNFSF13BQ9Y275 285 aa18.16■□□□□ 0.5
TRAPPC3-210ENST00000617904 PPP2R2CQ9Y2T4 447 aa18.16■□□□□ 0.5
TRAPPC3-210ENST00000617904 EPN1Q9Y6I3 576 aaPredicted RBP18.16■□□□□ 0.5
TRAPPC3-210ENST00000617904 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.15■□□□□ 0.5
TRAPPC3-210ENST00000617904 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.15■□□□□ 0.5
TRAPPC3-210ENST00000617904 SSU72P8A0A1W2PR75 194 aa18.15■□□□□ 0.5
TRAPPC3-210ENST00000617904 LRRC53A6NM62 1247 aa18.15■□□□□ 0.5
TRAPPC3-210ENST00000617904 TISP43B9A030 160 aa18.15■□□□□ 0.5
TRAPPC3-210ENST00000617904 ZC3H11AO75152 810 aaKnown RBP eCLIP18.15■□□□□ 0.54e-14■□□□□ 9.5
TRAPPC3-210ENST00000617904 CABYRO75952 493 aa18.15■□□□□ 0.5
TRAPPC3-210ENST00000617904 CYP2C9P11712 490 aa18.15■□□□□ 0.5
TRAPPC3-210ENST00000617904 TNNI1P19237 187 aa18.15■□□□□ 0.5
TRAPPC3-210ENST00000617904 MKRN4PQ13434 485 aaPredicted RBP18.15■□□□□ 0.5
TRAPPC3-210ENST00000617904 DRP2Q13474 957 aa18.15■□□□□ 0.5
TRAPPC3-210ENST00000617904 ZNF568Q3ZCX4 644 aa18.15■□□□□ 0.5
TRAPPC3-210ENST00000617904 ARHGAP29Q52LW3 1261 aa18.15■□□□□ 0.5
TRAPPC3-210ENST00000617904 WDR44Q5JSH3 913 aa18.15■□□□□ 0.5
TRAPPC3-210ENST00000617904 TAF2Q6P1X5 1199 aa18.15■□□□□ 0.5
TRAPPC3-210ENST00000617904 TRIM65Q6PJ69 517 aa18.15■□□□□ 0.5
TRAPPC3-210ENST00000617904 CBWD2Q8IUF1 395 aa18.15■□□□□ 0.5
TRAPPC3-210ENST00000617904 LINC01465Q8N7H1 131 aa18.15■□□□□ 0.5
TRAPPC3-210ENST00000617904 SLC43A3Q8NBI5 491 aa18.15■□□□□ 0.5
TRAPPC3-210ENST00000617904 MAFAQ8NHW3 353 aaPredicted RBP18.15■□□□□ 0.5
TRAPPC3-210ENST00000617904 IKZF4Q9H2S9 585 aa18.15■□□□□ 0.5
TRAPPC3-210ENST00000617904 SETD4Q9NVD3 440 aa18.15■□□□□ 0.5
TRAPPC3-210ENST00000617904 TRMT1Q9NXH9 659 aaKnown RBP18.15■□□□□ 0.5
TRAPPC3-210ENST00000617904 APEX2Q9UBZ4 518 aa18.15■□□□□ 0.5
TRAPPC3-210ENST00000617904 SOWAHDA6NJG2 315 aa18.14■□□□□ 0.49
TRAPPC3-210ENST00000617904 HAS3O00219 553 aa18.14■□□□□ 0.49
TRAPPC3-210ENST00000617904 AKR1B10O60218 316 aa18.14■□□□□ 0.49
TRAPPC3-210ENST00000617904 IL18RAPO95256 599 aa18.14■□□□□ 0.49
TRAPPC3-210ENST00000617904 NDUFA10O95299 355 aa18.14■□□□□ 0.49
TRAPPC3-210ENST00000617904 CD4P01730 458 aa18.14■□□□□ 0.49
TRAPPC3-210ENST00000617904 DLATP10515 647 aaKnown RBP18.14■□□□□ 0.49
TRAPPC3-210ENST00000617904 SLC9A1P19634 815 aa18.14■□□□□ 0.49
TRAPPC3-210ENST00000617904 GCLMP48507 274 aa18.14■□□□□ 0.49
TRAPPC3-210ENST00000617904 MFAP3P55082 362 aa18.14■□□□□ 0.49
TRAPPC3-210ENST00000617904 MCL1Q07820 350 aa18.14■□□□□ 0.49
TRAPPC3-210ENST00000617904 KLHL30Q0D2K2 578 aa18.14■□□□□ 0.49
TRAPPC3-210ENST00000617904 PPIGQ13427 754 aaKnown RBP eCLIP18.14■□□□□ 0.492e-6■■□□□ 13.5
TRAPPC3-210ENST00000617904 TMEM240Q5SV17 173 aa18.14■□□□□ 0.49
TRAPPC3-210ENST00000617904 E4F1Q66K89 784 aaPredicted RBP18.14■□□□□ 0.49
TRAPPC3-210ENST00000617904 SLC39A4Q6P5W5 647 aa18.14■□□□□ 0.49
TRAPPC3-210ENST00000617904 CXCL17Q6UXB2 119 aa18.14■□□□□ 0.49
TRAPPC3-210ENST00000617904 ENOSF1Q7L5Y1 443 aa18.14■□□□□ 0.49
TRAPPC3-210ENST00000617904 KIAA1328Q86T90 577 aa18.14■□□□□ 0.49
TRAPPC3-210ENST00000617904 CCDC155Q8N6L0 562 aa18.14■□□□□ 0.49
TRAPPC3-210ENST00000617904 FBXL13Q8NEE6 735 aa18.14■□□□□ 0.49
TRAPPC3-210ENST00000617904 LMBR1Q8WVP7 490 aa18.14■□□□□ 0.49
TRAPPC3-210ENST00000617904 IMPG2Q9BZV3 1241 aa18.14■□□□□ 0.49
TRAPPC3-210ENST00000617904 TSGA10Q9BZW7 698 aa18.14■□□□□ 0.49
TRAPPC3-210ENST00000617904 GANQ9H2C0 597 aa18.14■□□□□ 0.49
TRAPPC3-210ENST00000617904 NHEJ1Q9H9Q4 299 aaPredicted RBP18.14■□□□□ 0.49
TRAPPC3-210ENST00000617904 AIPL1Q9NZN9 384 aa18.14■□□□□ 0.49
TRAPPC3-210ENST00000617904 R3HCC1Q9Y3T6 440 aaKnown RBP18.14■□□□□ 0.49
TRAPPC3-210ENST00000617904 A0A087WZ62 844 aa18.13■□□□□ 0.49
TRAPPC3-210ENST00000617904 EIF3CLB5ME19 914 aaKnown RBP18.13■□□□□ 0.49
TRAPPC3-210ENST00000617904 TLR3O15455 904 aaKnown RBP18.13■□□□□ 0.49
TRAPPC3-210ENST00000617904 PHACTR2O75167 634 aa18.13■□□□□ 0.49
TRAPPC3-210ENST00000617904 MCF2P10911 925 aa18.13■□□□□ 0.49
TRAPPC3-210ENST00000617904 HARSP12081 509 aaKnown RBP18.13■□□□□ 0.49
TRAPPC3-210ENST00000617904 TNNT1P13805 278 aa18.13■□□□□ 0.49
TRAPPC3-210ENST00000617904 CSF2RAP15509 400 aa18.13■□□□□ 0.49
TRAPPC3-210ENST00000617904 DNAJB2P25686 324 aa18.13■□□□□ 0.49
TRAPPC3-210ENST00000617904 GPC3P51654 580 aa18.13■□□□□ 0.49
TRAPPC3-210ENST00000617904 NLRP11P59045 1033 aaKnown RBP18.13■□□□□ 0.49
TRAPPC3-210ENST00000617904 PURAQ00577 322 aaKnown RBP18.13■□□□□ 0.49
TRAPPC3-210ENST00000617904 MBTD1Q05BQ5 628 aa18.13■□□□□ 0.49
TRAPPC3-210ENST00000617904 RASIP1Q5U651 963 aa18.13■□□□□ 0.49
TRAPPC3-210ENST00000617904 SMYD5Q6GMV2 418 aa18.13■□□□□ 0.49
TRAPPC3-210ENST00000617904 PPP1R13BQ96KQ4 1090 aa18.13■□□□□ 0.49
TRAPPC3-210ENST00000617904 NT5C1BQ96P26 610 aa18.13■□□□□ 0.49
TRAPPC3-210ENST00000617904 EIF3CQ99613 913 aaKnown RBP18.13■□□□□ 0.49
TRAPPC3-210ENST00000617904 FDXACB1Q9BRP7 624 aaPredicted RBP18.13■□□□□ 0.49
TRAPPC3-210ENST00000617904 STK33Q9BYT3 514 aa18.13■□□□□ 0.49
TRAPPC3-210ENST00000617904 PPP1R12CQ9BZL4 782 aa18.13■□□□□ 0.49
TRAPPC3-210ENST00000617904 PAXBP1Q9Y5B6 917 aa18.13■□□□□ 0.49
TRAPPC3-210ENST00000617904 CUL9Q8IWT3 2517 aa18.13■□□□□ 0.49
TRAPPC3-210ENST00000617904 SIP14410 1827 aa18.12■□□□□ 0.49
TRAPPC3-210ENST00000617904 GRIN2DO15399 1336 aa18.12■□□□□ 0.49
TRAPPC3-210ENST00000617904 CNTNAP2Q9UHC6 1331 aa18.12■□□□□ 0.49
TRAPPC3-210ENST00000617904 UNC80Q8N2C7 3258 aa18.12■□□□□ 0.49
TRAPPC3-210ENST00000617904 MBLAC1A4D2B0 266 aaPredicted RBP18.12■□□□□ 0.49
TRAPPC3-210ENST00000617904 KIF5CO60282 957 aa18.12■□□□□ 0.49
TRAPPC3-210ENST00000617904 VTNP04004 478 aa18.12■□□□□ 0.49
TRAPPC3-210ENST00000617904 ADRB2P07550 413 aa18.12■□□□□ 0.49
TRAPPC3-210ENST00000617904 AXLP30530 894 aa18.12■□□□□ 0.49
TRAPPC3-210ENST00000617904 BIRC3Q13489 604 aa18.12■□□□□ 0.49
TRAPPC3-210ENST00000617904 GRIN2CQ14957 1233 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms