RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 SRGAP1Q7Z6B7 1085 aa9.46□□□□□ -0.9
GPC6-202ENST00000617456 GRASPQ7Z6J2 395 aaPredicted RBP9.46□□□□□ -0.9
GPC6-202ENST00000617456 RNF149Q8NC42 400 aa9.46□□□□□ -0.9
GPC6-202ENST00000617456 SMG8Q8ND04 991 aaKnown RBP9.46□□□□□ -0.9
GPC6-202ENST00000617456 RNF217Q8TC41 542 aa9.46□□□□□ -0.9
GPC6-202ENST00000617456 TCP11Q8WWU5 503 aa9.46□□□□□ -0.9
GPC6-202ENST00000617456 PSPC1Q8WXF1 523 aaKnown RBP9.46□□□□□ -0.9
GPC6-202ENST00000617456 HAS1Q92839 578 aa9.46□□□□□ -0.9
GPC6-202ENST00000617456 FGF14Q92915 247 aa9.46□□□□□ -0.9
GPC6-202ENST00000617456 TNFRSF25Q93038 417 aa9.46□□□□□ -0.9
GPC6-202ENST00000617456 SHDQ96IW2 340 aa9.46□□□□□ -0.9
GPC6-202ENST00000617456 CPB2Q96IY4 423 aa9.46□□□□□ -0.9
GPC6-202ENST00000617456 CEP170P1Q96L14 293 aa9.46□□□□□ -0.9
GPC6-202ENST00000617456 ZFP42Q96MM3 310 aa9.46□□□□□ -0.9
GPC6-202ENST00000617456 COLEC11Q9BWP8 271 aa9.46□□□□□ -0.9
GPC6-202ENST00000617456 BCO2Q9BYV7 579 aa9.46□□□□□ -0.9
GPC6-202ENST00000617456 GPR62Q9BZJ7 368 aa9.46□□□□□ -0.9
GPC6-202ENST00000617456 PLEKHA4Q9H4M7 779 aa9.46□□□□□ -0.9
GPC6-202ENST00000617456 DHX33Q9H6R0 707 aaKnown RBP9.46□□□□□ -0.9
GPC6-202ENST00000617456 UBN1Q9NPG3 1134 aa9.46□□□□□ -0.9
GPC6-202ENST00000617456 SLC2A4RGQ9NR83 387 aa9.46□□□□□ -0.9
GPC6-202ENST00000617456 ZDHHC7Q9NXF8 308 aa9.46□□□□□ -0.9
GPC6-202ENST00000617456 PCDHA12Q9UN75 941 aa9.46□□□□□ -0.9
GPC6-202ENST00000617456 KCNJ14Q9UNX9 436 aa9.46□□□□□ -0.9
GPC6-202ENST00000617456 MTF2Q9Y483 593 aaPredicted RBP9.46□□□□□ -0.9
GPC6-202ENST00000617456 IPPQ9Y573 584 aa9.46□□□□□ -0.9
GPC6-202ENST00000617456 DOCK6Q96HP0 2047 aa9.46□□□□□ -0.9
GPC6-202ENST00000617456 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.45□□□□□ -0.9
GPC6-202ENST00000617456 KANSL1LA0AUZ9 987 aa9.45□□□□□ -0.9
GPC6-202ENST00000617456 CCDC66A2RUB6 948 aa9.45□□□□□ -0.9
GPC6-202ENST00000617456 FAM170BA6NMN3 283 aa9.45□□□□□ -0.9
GPC6-202ENST00000617456 EML1O00423 815 aa9.45□□□□□ -0.9
GPC6-202ENST00000617456 SLC37A4O43826 429 aa9.45□□□□□ -0.9
GPC6-202ENST00000617456 MARCH6O60337 910 aa9.45□□□□□ -0.9
GPC6-202ENST00000617456 CD72P21854 359 aa9.45□□□□□ -0.9
GPC6-202ENST00000617456 MUTP22033 750 aa9.45□□□□□ -0.9
GPC6-202ENST00000617456 STARD6P59095 220 aa9.45□□□□□ -0.9
GPC6-202ENST00000617456 SPIRE1Q08AE8 756 aa9.45□□□□□ -0.9
GPC6-202ENST00000617456 MXD4Q14582 209 aaPredicted RBP9.45□□□□□ -0.9
GPC6-202ENST00000617456 MLF2Q15773 248 aaPredicted RBP9.45□□□□□ -0.9
GPC6-202ENST00000617456 SLC44A4Q53GD3 710 aa9.45□□□□□ -0.9
GPC6-202ENST00000617456 FUT10Q6P4F1 479 aa9.45□□□□□ -0.9
GPC6-202ENST00000617456 PRSS55Q6UWB4 352 aaPredicted RBP9.45□□□□□ -0.9
GPC6-202ENST00000617456 PIK3AP1Q6ZUJ8 805 aa9.45□□□□□ -0.9
GPC6-202ENST00000617456 RNF168Q8IYW5 571 aaPredicted RBP9.45□□□□□ -0.9
GPC6-202ENST00000617456 CNNM3Q8NE01 707 aa9.45□□□□□ -0.9
GPC6-202ENST00000617456 NSUN7Q8NE18 718 aaKnown RBP9.45□□□□□ -0.9
GPC6-202ENST00000617456 HDAC7Q8WUI4 952 aa9.45□□□□□ -0.9
GPC6-202ENST00000617456 ATRIPQ8WXE1 791 aa9.45□□□□□ -0.9
GPC6-202ENST00000617456 ZSCAN31Q96LW9 406 aaPredicted RBP9.45□□□□□ -0.9
GPC6-202ENST00000617456 AIFM3Q96NN9 605 aa9.45□□□□□ -0.9
GPC6-202ENST00000617456 HSD17B14Q9BPX1 270 aa9.45□□□□□ -0.9
GPC6-202ENST00000617456 NFKBIZQ9BYH8 718 aa9.45□□□□□ -0.9
GPC6-202ENST00000617456 ANKEF1Q9NU02 776 aa9.45□□□□□ -0.9
GPC6-202ENST00000617456 DONSONQ9NYP3 566 aa9.45□□□□□ -0.9
GPC6-202ENST00000617456 CACNG4Q9UBN1 327 aa9.45□□□□□ -0.9
GPC6-202ENST00000617456 CDH7Q9ULB5 785 aa9.45□□□□□ -0.9
GPC6-202ENST00000617456 USP18Q9UMW8 372 aa9.45□□□□□ -0.9
GPC6-202ENST00000617456 POLIQ9UNA4 740 aa9.45□□□□□ -0.9
GPC6-202ENST00000617456 LIMCH1Q9UPQ0 1083 aa9.45□□□□□ -0.9
GPC6-202ENST00000617456 MAP1BP46821 2468 aaKnown RBP9.45□□□□□ -0.9
GPC6-202ENST00000617456 CHD8Q9HCK8 2581 aa9.45□□□□□ -0.9
GPC6-202ENST00000617456 DCDC2BA2VCK2 349 aa9.44□□□□□ -0.9
GPC6-202ENST00000617456 CCL16O15467 120 aa9.44□□□□□ -0.9
GPC6-202ENST00000617456 TADA2AO75478 443 aa9.44□□□□□ -0.9
GPC6-202ENST00000617456 ZMYND10O75800 440 aa9.44□□□□□ -0.9
GPC6-202ENST00000617456 SLITRK3O94933 977 aa9.44□□□□□ -0.9
GPC6-202ENST00000617456 AKAP5P24588 427 aa9.44□□□□□ -0.9
GPC6-202ENST00000617456 AXLP30530 894 aa9.44□□□□□ -0.9
GPC6-202ENST00000617456 YWHABP31946 246 aaKnown RBP9.44□□□□□ -0.9
GPC6-202ENST00000617456 ATXN1P54253 815 aaKnown RBP9.44□□□□□ -0.9
GPC6-202ENST00000617456 HMGN5P82970 282 aaKnown RBP9.44□□□□□ -0.9
GPC6-202ENST00000617456 DSC1Q08554 894 aa9.44□□□□□ -0.9
GPC6-202ENST00000617456 NCBP1Q09161 790 aaKnown RBP9.44□□□□□ -0.9
GPC6-202ENST00000617456 EMC2Q15006 297 aa9.44□□□□□ -0.9
GPC6-202ENST00000617456 SAFBQ15424 915 aaKnown RBP eCLIP9.44□□□□□ -0.9
GPC6-202ENST00000617456 UVSSAQ2YD98 709 aa9.44□□□□□ -0.9
GPC6-202ENST00000617456 USP41Q3LFD5 358 aa9.44□□□□□ -0.9
GPC6-202ENST00000617456 SWT1Q5T5J6 900 aaKnown RBP9.44□□□□□ -0.9
GPC6-202ENST00000617456 NOTUMQ6P988 496 aa9.44□□□□□ -0.9
GPC6-202ENST00000617456 LILRA6Q6PI73 481 aa9.44□□□□□ -0.9
GPC6-202ENST00000617456 CEP57Q86XR8 500 aa9.44□□□□□ -0.9
GPC6-202ENST00000617456 CREBRFQ8IUR6 639 aa9.44□□□□□ -0.9
GPC6-202ENST00000617456 MNS1Q8NEH6 495 aa9.44□□□□□ -0.9
GPC6-202ENST00000617456 ITFG1Q8TB96 612 aa9.44□□□□□ -0.9
GPC6-202ENST00000617456 CCDC51Q96ER9 411 aa9.44□□□□□ -0.9
GPC6-202ENST00000617456 BORCS6Q96GS4 357 aa9.44□□□□□ -0.9
GPC6-202ENST00000617456 KXD1Q9BQD3 176 aa9.44□□□□□ -0.9
GPC6-202ENST00000617456 LARP6Q9BRS8 491 aaKnown RBP9.44□□□□□ -0.9
GPC6-202ENST00000617456 TRIM6Q9C030 488 aaPredicted RBP9.44□□□□□ -0.9
GPC6-202ENST00000617456 FOXP1Q9H334 677 aaPredicted RBP9.44□□□□□ -0.9
GPC6-202ENST00000617456 SH2B1Q9NRF2 756 aaPredicted RBP9.44□□□□□ -0.9
GPC6-202ENST00000617456 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.44□□□□□ -0.9
GPC6-202ENST00000617456 CHST7Q9NS84 486 aa9.44□□□□□ -0.9
GPC6-202ENST00000617456 KLK14Q9P0G3 267 aa9.44□□□□□ -0.9
GPC6-202ENST00000617456 FNIP2Q9P278 1114 aa9.44□□□□□ -0.9
GPC6-202ENST00000617456 WRAP73Q9P2S5 460 aaPredicted RBP9.44□□□□□ -0.9
GPC6-202ENST00000617456 CDV3Q9UKY7 258 aaKnown RBP9.44□□□□□ -0.9
GPC6-202ENST00000617456 SMG5Q9UPR3 1016 aaKnown RBP9.44□□□□□ -0.9
GPC6-202ENST00000617456 COL4A3Q01955 1670 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms