RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 RASSF2P50749 326 aa16.62■□□□□ 0.25
GPN1-212ENST00000616939 PPP2R5CQ13362 524 aa16.62■□□□□ 0.25
GPN1-212ENST00000616939 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.62■□□□□ 0.25
GPN1-212ENST00000616939 ASAP3Q8TDY4 903 aa16.62■□□□□ 0.25
GPN1-212ENST00000616939 DCLK3Q9C098 648 aa16.62■□□□□ 0.25
GPN1-212ENST00000616939 GGA1Q9UJY5 639 aa16.62■□□□□ 0.25
GPN1-212ENST00000616939 NAALADL1Q9UQQ1 740 aa16.62■□□□□ 0.25
GPN1-212ENST00000616939 EMSYQ7Z589 1322 aa16.62■□□□□ 0.25
GPN1-212ENST00000616939 EXOC3O60645 756 aa16.61■□□□□ 0.25
GPN1-212ENST00000616939 UFL1O94874 794 aa16.61■□□□□ 0.25
GPN1-212ENST00000616939 ASMTLO95671 621 aa16.61■□□□□ 0.25
GPN1-212ENST00000616939 DLATP10515 647 aaKnown RBP16.61■□□□□ 0.25
GPN1-212ENST00000616939 ALDH3A1P30838 453 aa16.61■□□□□ 0.25
GPN1-212ENST00000616939 PTP4A2Q12974 167 aa16.61■□□□□ 0.25
GPN1-212ENST00000616939 KYNUQ16719 465 aa16.61■□□□□ 0.25
GPN1-212ENST00000616939 ANO7Q6IWH7 933 aa16.61■□□□□ 0.25
GPN1-212ENST00000616939 VSIG1Q86XK7 387 aa16.61■□□□□ 0.25
GPN1-212ENST00000616939 CYP4X1Q8N118 509 aa16.61■□□□□ 0.25
GPN1-212ENST00000616939 ZNF398Q8TD17 642 aa16.61■□□□□ 0.25
GPN1-212ENST00000616939 DENND1AQ8TEH3 1009 aa16.61■□□□□ 0.25
GPN1-212ENST00000616939 MAML1Q92585 1016 aa16.61■□□□□ 0.25
GPN1-212ENST00000616939 PPCSQ9HAB8 311 aa16.61■□□□□ 0.25
GPN1-212ENST00000616939 SENP1Q9P0U3 644 aa16.61■□□□□ 0.25
GPN1-212ENST00000616939 ANAPC5Q9UJX4 755 aa16.61■□□□□ 0.25
GPN1-212ENST00000616939 NEU2Q9Y3R4 380 aa16.61■□□□□ 0.25
GPN1-212ENST00000616939 IGLV3-22A0A075B6J6 115 aa16.61■□□□□ 0.25
GPN1-212ENST00000616939 HLA-DOAP06340 250 aa16.61■□□□□ 0.25
GPN1-212ENST00000616939 ATP4AP20648 1035 aa16.61■□□□□ 0.25
GPN1-212ENST00000616939 WDR4P57081 412 aaKnown RBP16.61■□□□□ 0.25
GPN1-212ENST00000616939 FMO1Q01740 532 aa16.61■□□□□ 0.25
GPN1-212ENST00000616939 TSNAXIP1Q2TAA8 658 aa16.61■□□□□ 0.25
GPN1-212ENST00000616939 APBB1IPQ7Z5R6 666 aaPredicted RBP16.61■□□□□ 0.25
GPN1-212ENST00000616939 NOP9Q86U38 636 aaKnown RBP16.61■□□□□ 0.25
GPN1-212ENST00000616939 FAM13CQ8NE31 585 aa16.61■□□□□ 0.25
GPN1-212ENST00000616939 ATL2Q8NHH9 583 aa16.61■□□□□ 0.25
GPN1-212ENST00000616939 ZNF653Q96CK0 615 aa16.61■□□□□ 0.25
GPN1-212ENST00000616939 GPR101Q96P66 508 aaPredicted RBP16.61■□□□□ 0.25
GPN1-212ENST00000616939 IKZF4Q9H2S9 585 aa16.61■□□□□ 0.25
GPN1-212ENST00000616939 ARHGEF10LQ9HCE6 1279 aa16.61■□□□□ 0.25
GPN1-212ENST00000616939 DDX4Q9NQI0 724 aaKnown RBP16.61■□□□□ 0.25
GPN1-212ENST00000616939 RGL1Q9NZL6 768 aa16.61■□□□□ 0.25
GPN1-212ENST00000616939 NKX1-2Q9UD57 310 aaPredicted RBP16.61■□□□□ 0.25
GPN1-212ENST00000616939 LNPEPQ9UIQ6 1025 aa16.61■□□□□ 0.25
GPN1-212ENST00000616939 SMG5Q9UPR3 1016 aaKnown RBP16.61■□□□□ 0.25
GPN1-212ENST00000616939 CHKBQ9Y259 395 aa16.61■□□□□ 0.25
GPN1-212ENST00000616939 KLHL33A6NCF5 533 aa16.6■□□□□ 0.25
GPN1-212ENST00000616939 SFI1A8K8P3 1242 aa16.6■□□□□ 0.25
GPN1-212ENST00000616939 PIK3CDO00329 1044 aa16.6■□□□□ 0.25
GPN1-212ENST00000616939 CLDN3O15551 220 aa16.6■□□□□ 0.25
GPN1-212ENST00000616939 ECE2O60344 883 aa16.6■□□□□ 0.25
GPN1-212ENST00000616939 SLITRK3O94933 977 aa16.6■□□□□ 0.25
GPN1-212ENST00000616939 CETPP11597 493 aa16.6■□□□□ 0.25
GPN1-212ENST00000616939 NEFHP12036 1026 aa16.6■□□□□ 0.25
GPN1-212ENST00000616939 VAMP7P51809 220 aa16.6■□□□□ 0.25
GPN1-212ENST00000616939 RAD23BP54727 409 aa16.6■□□□□ 0.25
GPN1-212ENST00000616939 SNRPFP62306 86 aaKnown RBP16.6■□□□□ 0.25
GPN1-212ENST00000616939 PICALMQ13492 652 aa16.6■□□□□ 0.25
GPN1-212ENST00000616939 RASA2Q15283 850 aa16.6■□□□□ 0.25
GPN1-212ENST00000616939 SYDE2Q5VT97 1194 aa16.6■□□□□ 0.25
GPN1-212ENST00000616939 AP1ARQ63HQ0 302 aa16.6■□□□□ 0.25
GPN1-212ENST00000616939 SLFN13Q68D06 897 aa16.6■□□□□ 0.25
GPN1-212ENST00000616939 TRABD2AQ86V40 505 aa16.6■□□□□ 0.25
GPN1-212ENST00000616939 FBXO11Q86XK2 927 aa16.6■□□□□ 0.25
GPN1-212ENST00000616939 SHC3Q92529 594 aa16.6■□□□□ 0.25
GPN1-212ENST00000616939 SLC5A5Q92911 643 aa16.6■□□□□ 0.25
GPN1-212ENST00000616939 ERP27Q96DN0 273 aa16.6■□□□□ 0.25
GPN1-212ENST00000616939 NACC1Q96RE7 527 aa16.6■□□□□ 0.25
GPN1-212ENST00000616939 POP1Q99575 1024 aaKnown RBP16.6■□□□□ 0.25
GPN1-212ENST00000616939 MLXIPLQ9NP71 852 aa16.6■□□□□ 0.25
GPN1-212ENST00000616939 SAR1AQ9NR31 198 aa16.6■□□□□ 0.25
GPN1-212ENST00000616939 ATRNL1Q5VV63 1379 aa16.6■□□□□ 0.25
GPN1-212ENST00000616939 PSMD10O75832 226 aa16.59■□□□□ 0.25
GPN1-212ENST00000616939 SGPL1O95470 568 aa16.59■□□□□ 0.25
GPN1-212ENST00000616939 SLC1A1P43005 524 aa16.59■□□□□ 0.25
GPN1-212ENST00000616939 PRELPP51888 382 aa16.59■□□□□ 0.25
GPN1-212ENST00000616939 SPARCL1Q14515 664 aa16.59■□□□□ 0.25
GPN1-212ENST00000616939 RASA3Q14644 834 aa16.59■□□□□ 0.25
GPN1-212ENST00000616939 PDK4Q16654 411 aa16.59■□□□□ 0.25
GPN1-212ENST00000616939 TMEM63BQ5T3F8 832 aa16.59■□□□□ 0.25
GPN1-212ENST00000616939 OTOP1Q7RTM1 612 aa16.59■□□□□ 0.25
GPN1-212ENST00000616939 MFN1Q8IWA4 741 aa16.59■□□□□ 0.25
GPN1-212ENST00000616939 SRRM1Q8IYB3 904 aaKnown RBP16.59■□□□□ 0.25
GPN1-212ENST00000616939 KCNV2Q8TDN2 545 aa16.59■□□□□ 0.25
GPN1-212ENST00000616939 C10orf82Q8WW14 230 aa16.59■□□□□ 0.25
GPN1-212ENST00000616939 C1orf54Q8WWF1 131 aa16.59■□□□□ 0.25
GPN1-212ENST00000616939 SLC7A6OSQ96CW6 309 aaPredicted RBP16.59■□□□□ 0.25
GPN1-212ENST00000616939 DYDC2Q96IM9 177 aa16.59■□□□□ 0.25
GPN1-212ENST00000616939 LRRC37BQ96QE4 947 aa16.59■□□□□ 0.25
GPN1-212ENST00000616939 TMEM206Q9H813 350 aa16.59■□□□□ 0.25
GPN1-212ENST00000616939 AVENQ9NQS1 362 aaPredicted RBP16.59■□□□□ 0.25
GPN1-212ENST00000616939 LRRD1A4D1F6 860 aa16.59■□□□□ 0.25
GPN1-212ENST00000616939 EDF1O60869 148 aaKnown RBP16.59■□□□□ 0.25
GPN1-212ENST00000616939 SNUPNO95149 360 aaKnown RBP16.59■□□□□ 0.25
GPN1-212ENST00000616939 CDR2Q01850 454 aa16.59■□□□□ 0.25
GPN1-212ENST00000616939 RBBP5Q15291 538 aaKnown RBP16.59■□□□□ 0.25
GPN1-212ENST00000616939 ZNF746Q6NUN9 644 aaPredicted RBP16.59■□□□□ 0.25
GPN1-212ENST00000616939 CCDC24Q8N4L8 307 aa16.59■□□□□ 0.25
GPN1-212ENST00000616939 CERKQ8TCT0 537 aa16.59■□□□□ 0.25
GPN1-212ENST00000616939 ZFAND2BQ8WV99 257 aa16.59■□□□□ 0.25
GPN1-212ENST00000616939 TTC25Q96NG3 672 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms