RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 DDX12PQ92771 950 aa16.32■□□□□ 0.2
UBXN1-218ENST00000616865 TMEM143Q96AN5 459 aa16.32■□□□□ 0.2
UBXN1-218ENST00000616865 DRC1Q96MC2 740 aa16.32■□□□□ 0.2
UBXN1-218ENST00000616865 STK39Q9UEW8 545 aa16.32■□□□□ 0.2
UBXN1-218ENST00000616865 PCDHB2Q9Y5E7 798 aa16.32■□□□□ 0.2
UBXN1-218ENST00000616865 COL4A3BPQ9Y5P4 624 aa16.32■□□□□ 0.2
UBXN1-218ENST00000616865 NPHP3-ACAD11A0A0J9YXS1 232 aa16.31■□□□□ 0.2
UBXN1-218ENST00000616865 HIP1RO75146 1068 aa16.31■□□□□ 0.2
UBXN1-218ENST00000616865 SMC2O95347 1197 aa16.31■□□□□ 0.2
UBXN1-218ENST00000616865 MYL1P05976 194 aa16.31■□□□□ 0.2
UBXN1-218ENST00000616865 GUCY2CP25092 1073 aa16.31■□□□□ 0.2
UBXN1-218ENST00000616865 NBL1P41271 181 aa16.31■□□□□ 0.2
UBXN1-218ENST00000616865 CLCN4P51793 760 aa16.31■□□□□ 0.2
UBXN1-218ENST00000616865 ARSHQ5FYA8 562 aa16.31■□□□□ 0.2
UBXN1-218ENST00000616865 AGMOQ6ZNB7 445 aa16.31■□□□□ 0.2
UBXN1-218ENST00000616865 ZNF280BQ86YH2 543 aa16.31■□□□□ 0.2
UBXN1-218ENST00000616865 CCDC65Q8IXS2 484 aa16.31■□□□□ 0.2
UBXN1-218ENST00000616865 PSPC1Q8WXF1 523 aaKnown RBP16.31■□□□□ 0.2
UBXN1-218ENST00000616865 KIFAP3Q92845 792 aa16.31■□□□□ 0.2
UBXN1-218ENST00000616865 SYAP1Q96A49 352 aaPredicted RBP16.31■□□□□ 0.2
UBXN1-218ENST00000616865 ACSF2Q96CM8 615 aaPredicted RBP16.31■□□□□ 0.2
UBXN1-218ENST00000616865 IFT74Q96LB3 600 aa16.31■□□□□ 0.2
UBXN1-218ENST00000616865 KLHL5Q96PQ7 755 aa16.31■□□□□ 0.2
UBXN1-218ENST00000616865 C7orf25Q9BPX7 421 aa16.31■□□□□ 0.2
UBXN1-218ENST00000616865 EMILIN2Q9BXX0 1053 aa16.31■□□□□ 0.2
UBXN1-218ENST00000616865 POLR3FQ9H1D9 316 aaPredicted RBP16.31■□□□□ 0.2
UBXN1-218ENST00000616865 BLZF1Q9H2G9 400 aa16.31■□□□□ 0.2
UBXN1-218ENST00000616865 MFSD1Q9H3U5 465 aa16.31■□□□□ 0.2
UBXN1-218ENST00000616865 RSAD1Q9HA92 442 aa16.31■□□□□ 0.2
UBXN1-218ENST00000616865 ODF2LQ9ULJ1 636 aa16.31■□□□□ 0.2
UBXN1-218ENST00000616865 CNTNAP2Q9UHC6 1331 aa16.3■□□□□ 0.2
UBXN1-218ENST00000616865 SPDYE4A6NLX3 237 aa16.3■□□□□ 0.2
UBXN1-218ENST00000616865 DDHD2O94830 711 aa16.3■□□□□ 0.2
UBXN1-218ENST00000616865 CACNB1Q02641 598 aaPredicted RBP16.3■□□□□ 0.2
UBXN1-218ENST00000616865 POSTNQ15063 836 aa16.3■□□□□ 0.2
UBXN1-218ENST00000616865 CWF19L1Q69YN2 538 aaKnown RBP16.3■□□□□ 0.2
UBXN1-218ENST00000616865 ASCL5Q7RTU5 278 aa16.3■□□□□ 0.2
UBXN1-218ENST00000616865 REEP2Q9BRK0 252 aa16.3■□□□□ 0.2
UBXN1-218ENST00000616865 TMEM175Q9BSA9 504 aa16.3■□□□□ 0.2
UBXN1-218ENST00000616865 TRIM9Q9C026 710 aa16.3■□□□□ 0.2
UBXN1-218ENST00000616865 NUP62CLQ9H1M0 184 aa16.3■□□□□ 0.2
UBXN1-218ENST00000616865 VPS13AQ96RL7 3174 aa16.29■□□□□ 0.2
UBXN1-218ENST00000616865 PRR23AA6NEV1 266 aa16.29■□□□□ 0.2
UBXN1-218ENST00000616865 ASAP2O43150 1006 aa16.29■□□□□ 0.2
UBXN1-218ENST00000616865 CNPP09543 421 aaKnown RBP16.29■□□□□ 0.2
UBXN1-218ENST00000616865 KLRC2P26717 231 aa16.29■□□□□ 0.2
UBXN1-218ENST00000616865 CLCN5P51795 746 aa16.29■□□□□ 0.2
UBXN1-218ENST00000616865 AFF1P51825 1210 aaKnown RBP16.29■□□□□ 0.2
UBXN1-218ENST00000616865 CUL4BQ13620 913 aa16.29■□□□□ 0.2
UBXN1-218ENST00000616865 TFDP1Q14186 410 aa16.29■□□□□ 0.2
UBXN1-218ENST00000616865 MXD4Q14582 209 aaPredicted RBP16.29■□□□□ 0.2
UBXN1-218ENST00000616865 PPP2R5AQ15172 486 aa16.29■□□□□ 0.2
UBXN1-218ENST00000616865 CAMK4Q16566 473 aa16.29■□□□□ 0.2
UBXN1-218ENST00000616865 C15orf39Q6ZRI6 1047 aa16.29■□□□□ 0.2
UBXN1-218ENST00000616865 OTOP3Q7RTS5 596 aa16.29■□□□□ 0.2
UBXN1-218ENST00000616865 MRPL10Q7Z7H8 261 aaKnown RBP16.29■□□□□ 0.2
UBXN1-218ENST00000616865 MYCT1Q8N699 235 aa16.29■□□□□ 0.2
UBXN1-218ENST00000616865 CLSTN2Q9H4D0 955 aa16.29■□□□□ 0.2
UBXN1-218ENST00000616865 MINDY3Q9H8M7 445 aa16.29■□□□□ 0.2
UBXN1-218ENST00000616865 POLD4Q9HCU8 107 aa16.29■□□□□ 0.2
UBXN1-218ENST00000616865 GPRC5CQ9NQ84 441 aa16.29■□□□□ 0.2
UBXN1-218ENST00000616865 XPNPEP1Q9NQW7 623 aa16.29■□□□□ 0.2
UBXN1-218ENST00000616865 PANK4Q9NVE7 773 aa16.29■□□□□ 0.2
UBXN1-218ENST00000616865 KANSL3Q9P2N6 904 aa16.29■□□□□ 0.2
UBXN1-218ENST00000616865 DUSP12Q9UNI6 340 aa16.29■□□□□ 0.2
UBXN1-218ENST00000616865 TDRD15B5MCY1 1934 aaKnown RBP16.29■□□□□ 0.2
UBXN1-218ENST00000616865 LILRB3O75022 631 aa16.28■□□□□ 0.2
UBXN1-218ENST00000616865 GAP43P17677 238 aa16.28■□□□□ 0.2
UBXN1-218ENST00000616865 CASP1P29466 404 aa16.28■□□□□ 0.2
UBXN1-218ENST00000616865 PNOCQ13519 176 aa16.28■□□□□ 0.2
UBXN1-218ENST00000616865 TDGQ13569 410 aa16.28■□□□□ 0.2
UBXN1-218ENST00000616865 UBXN11Q5T124 520 aa16.28■□□□□ 0.2
UBXN1-218ENST00000616865 SRGAP1Q7Z6B7 1085 aa16.28■□□□□ 0.2
UBXN1-218ENST00000616865 ELOA2Q8IYF1 753 aaPredicted RBP16.28■□□□□ 0.2
UBXN1-218ENST00000616865 PRPF31Q8WWY3 499 aaKnown RBP16.28■□□□□ 0.2
UBXN1-218ENST00000616865 SMARCE1Q969G3 411 aa16.28■□□□□ 0.2
UBXN1-218ENST00000616865 FAM193BQ96PV7 902 aaPredicted RBP16.28■□□□□ 0.2
UBXN1-218ENST00000616865 PARVGQ9HBI0 331 aa16.28■□□□□ 0.2
UBXN1-218ENST00000616865 MRPL17Q9NRX2 175 aaKnown RBP16.28■□□□□ 0.2
UBXN1-218ENST00000616865 EXOC1Q9NV70 894 aa16.28■□□□□ 0.2
UBXN1-218ENST00000616865 MARCH5Q9NX47 278 aa16.28■□□□□ 0.2
UBXN1-218ENST00000616865 LARSQ9P2J5 1176 aaKnown RBP16.28■□□□□ 0.2
UBXN1-218ENST00000616865 KCNG1Q9UIX4 513 aa16.28■□□□□ 0.2
UBXN1-218ENST00000616865 FAN1Q9Y2M0 1017 aa16.28■□□□□ 0.2
UBXN1-218ENST00000616865 LRRIQ4A6NIV6 560 aa16.27■□□□□ 0.2
UBXN1-218ENST00000616865 CCDC169A6NNP5 214 aa16.27■□□□□ 0.2
UBXN1-218ENST00000616865 SFI1A8K8P3 1242 aa16.27■□□□□ 0.2
UBXN1-218ENST00000616865 NRP1O14786 923 aa16.27■□□□□ 0.2
UBXN1-218ENST00000616865 POMCP01189 267 aa16.27■□□□□ 0.2
UBXN1-218ENST00000616865 SOD2P04179 222 aa16.27■□□□□ 0.2
UBXN1-218ENST00000616865 RPN1P04843 607 aaKnown RBP16.27■□□□□ 0.2
UBXN1-218ENST00000616865 ALDH2P05091 517 aa16.27■□□□□ 0.2
UBXN1-218ENST00000616865 URODP06132 367 aa16.27■□□□□ 0.2
UBXN1-218ENST00000616865 PRR29P0C7W0 189 aa16.27■□□□□ 0.2
UBXN1-218ENST00000616865 SRGAP2CP0DJJ0 459 aa16.27■□□□□ 0.2
UBXN1-218ENST00000616865 HOXA11P31270 313 aaPredicted RBP16.27■□□□□ 0.2
UBXN1-218ENST00000616865 ARL2P36404 184 aa16.27■□□□□ 0.2
UBXN1-218ENST00000616865 SMTNP53814 917 aa16.27■□□□□ 0.2
UBXN1-218ENST00000616865 LAMTOR4Q0VGL1 99 aa16.27■□□□□ 0.2
UBXN1-218ENST00000616865 DMP1Q13316 513 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms