RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 IFI16Q16666 785 aaKnown RBP16.75■□□□□ 0.27
SEMA3B-212ENST00000616701 WDR93Q6P2C0 686 aa16.75■□□□□ 0.27
SEMA3B-212ENST00000616701 KLHL7Q8IXQ5 586 aa16.75■□□□□ 0.27
SEMA3B-212ENST00000616701 MMGT1Q8N4V1 131 aa16.75■□□□□ 0.27
SEMA3B-212ENST00000616701 TCHPQ9BT92 498 aa16.75■□□□□ 0.27
SEMA3B-212ENST00000616701 RBAKQ9NYW8 714 aaPredicted RBP16.75■□□□□ 0.27
SEMA3B-212ENST00000616701 ZNFX1Q9P2E3 1918 aaKnown RBP16.75■□□□□ 0.27
SEMA3B-212ENST00000616701 ZSCAN5CA6NGD5 496 aaPredicted RBP16.74■□□□□ 0.27
SEMA3B-212ENST00000616701 PDHXO00330 501 aa16.74■□□□□ 0.27
SEMA3B-212ENST00000616701 TNFSF9P41273 254 aa16.74■□□□□ 0.27
SEMA3B-212ENST00000616701 GPC3P51654 580 aa16.74■□□□□ 0.27
SEMA3B-212ENST00000616701 SMC1AQ14683 1233 aaKnown RBP16.74■□□□□ 0.27
SEMA3B-212ENST00000616701 RHPN2Q8IUC4 686 aa16.74■□□□□ 0.27
SEMA3B-212ENST00000616701 FAM71AQ8IYT1 594 aa16.74■□□□□ 0.27
SEMA3B-212ENST00000616701 METTL13Q8N6R0 699 aa16.74■□□□□ 0.27
SEMA3B-212ENST00000616701 RNF149Q8NC42 400 aa16.74■□□□□ 0.27
SEMA3B-212ENST00000616701 HNRNPLLQ8WVV9 542 aaKnown RBP16.74■□□□□ 0.27
SEMA3B-212ENST00000616701 KRT12Q99456 494 aa16.74■□□□□ 0.27
SEMA3B-212ENST00000616701 AP1M1Q9BXS5 423 aa16.74■□□□□ 0.27
SEMA3B-212ENST00000616701 MAF1Q9H063 256 aa16.74■□□□□ 0.27
SEMA3B-212ENST00000616701 H0YCG3 227 aa16.74■□□□□ 0.27
SEMA3B-212ENST00000616701 MAFO75444 373 aaPredicted RBP16.74■□□□□ 0.27
SEMA3B-212ENST00000616701 CSDE1O75534 798 aaKnown RBP16.74■□□□□ 0.27
SEMA3B-212ENST00000616701 TMEM253P0C7T8 217 aa16.74■□□□□ 0.27
SEMA3B-212ENST00000616701 PLCB4Q15147 1175 aa16.74■□□□□ 0.27
SEMA3B-212ENST00000616701 TDRD10Q5VZ19 366 aaKnown RBP16.74■□□□□ 0.27
SEMA3B-212ENST00000616701 PHLDB2Q86SQ0 1253 aa16.74■□□□□ 0.27
SEMA3B-212ENST00000616701 RFFLQ8WZ73 363 aa16.74■□□□□ 0.27
SEMA3B-212ENST00000616701 NLRP4Q96MN2 994 aa16.74■□□□□ 0.27
SEMA3B-212ENST00000616701 MPHOSPH6Q99547 160 aaKnown RBP16.74■□□□□ 0.27
SEMA3B-212ENST00000616701 ESYT3A0FGR9 886 aa16.74■□□□□ 0.27
SEMA3B-212ENST00000616701 ZBTB42B2RXF5 422 aa16.74■□□□□ 0.27
SEMA3B-212ENST00000616701 CALRP27797 417 aaKnown RBP16.74■□□□□ 0.27
SEMA3B-212ENST00000616701 RFC5P40937 340 aa16.74■□□□□ 0.27
SEMA3B-212ENST00000616701 CASP8Q14790 479 aa16.74■□□□□ 0.27
SEMA3B-212ENST00000616701 C8orf74Q6P047 294 aa16.74■□□□□ 0.27
SEMA3B-212ENST00000616701 ARMCX2Q7L311 632 aa16.74■□□□□ 0.27
SEMA3B-212ENST00000616701 SHC3Q92529 594 aa16.74■□□□□ 0.27
SEMA3B-212ENST00000616701 CTTNBP2NLQ9P2B4 639 aa16.74■□□□□ 0.27
SEMA3B-212ENST00000616701 NOCTQ9UK39 431 aaKnown RBP16.74■□□□□ 0.27
SEMA3B-212ENST00000616701 COQ4Q9Y3A0 265 aa16.74■□□□□ 0.27
SEMA3B-212ENST00000616701 CCL15-CCL14A0A0B4J2E2 113 aa16.73■□□□□ 0.27
SEMA3B-212ENST00000616701 BTBD19C9JJ37 291 aa16.73■□□□□ 0.27
SEMA3B-212ENST00000616701 ADCY3O60266 1144 aa16.73■□□□□ 0.27
SEMA3B-212ENST00000616701 HLA-DRAP01903 254 aa16.73■□□□□ 0.27
SEMA3B-212ENST00000616701 IBSPP21815 317 aaPredicted RBP16.73■□□□□ 0.27
SEMA3B-212ENST00000616701 PIK3CAP42336 1068 aa16.73■□□□□ 0.27
SEMA3B-212ENST00000616701 CLCN3P51790 818 aa16.73■□□□□ 0.27
SEMA3B-212ENST00000616701 LAMTOR4Q0VGL1 99 aa16.73■□□□□ 0.27
SEMA3B-212ENST00000616701 CCL15Q16663 113 aa16.73■□□□□ 0.27
SEMA3B-212ENST00000616701 HDXQ7Z353 690 aa16.73■□□□□ 0.27
SEMA3B-212ENST00000616701 NT5DC3Q86UY8 548 aa16.73■□□□□ 0.27
SEMA3B-212ENST00000616701 OR5B17Q8NGF7 314 aa16.73■□□□□ 0.27
SEMA3B-212ENST00000616701 AFAP1L1Q8TED9 768 aa16.73■□□□□ 0.27
SEMA3B-212ENST00000616701 BTBD6Q96KE9 485 aa16.73■□□□□ 0.27
SEMA3B-212ENST00000616701 MROH8Q9H579 483 aa16.73■□□□□ 0.27
SEMA3B-212ENST00000616701 H3BQF6 201 aa16.73■□□□□ 0.27
SEMA3B-212ENST00000616701 CYP11B1P15538 503 aa16.73■□□□□ 0.27
SEMA3B-212ENST00000616701 OSTNP61366 133 aa16.73■□□□□ 0.27
SEMA3B-212ENST00000616701 FMO1Q01740 532 aa16.73■□□□□ 0.27
SEMA3B-212ENST00000616701 CCDC70Q6NSX1 233 aa16.73■□□□□ 0.27
SEMA3B-212ENST00000616701 CCDC62Q6P9F0 684 aa16.73■□□□□ 0.27
SEMA3B-212ENST00000616701 ZNF572Q7Z3I7 529 aaPredicted RBP16.73■□□□□ 0.27
SEMA3B-212ENST00000616701 CPNE8Q86YQ8 564 aa16.73■□□□□ 0.27
SEMA3B-212ENST00000616701 INTUQ9ULD6 942 aa16.73■□□□□ 0.27
SEMA3B-212ENST00000616701 CENPFP49454 3210 aa16.73■□□□□ 0.27
SEMA3B-212ENST00000616701 ANKRD62A6NC57 917 aa16.72■□□□□ 0.27
SEMA3B-212ENST00000616701 MAP2K7O14733 419 aa16.72■□□□□ 0.27
SEMA3B-212ENST00000616701 ADORA2AP29274 412 aa16.72■□□□□ 0.27
SEMA3B-212ENST00000616701 C2CD6Q53TS8 623 aa16.72■□□□□ 0.27
SEMA3B-212ENST00000616701 NAA35Q5VZE5 725 aa16.72■□□□□ 0.27
SEMA3B-212ENST00000616701 MMS22LQ6ZRQ5 1243 aa16.72■□□□□ 0.27
SEMA3B-212ENST00000616701 ADAT2Q7Z6V5 191 aaKnown RBP16.72■□□□□ 0.27
SEMA3B-212ENST00000616701 USP37Q86T82 979 aa16.72■□□□□ 0.27
SEMA3B-212ENST00000616701 GPRC5AQ8NFJ5 357 aa16.72■□□□□ 0.27
SEMA3B-212ENST00000616701 RNPEPQ9H4A4 650 aa16.72■□□□□ 0.27
SEMA3B-212ENST00000616701 LRRC37A2A6NM11 1700 aa16.72■□□□□ 0.27
SEMA3B-212ENST00000616701 NCANO14594 1321 aa16.72■□□□□ 0.27
SEMA3B-212ENST00000616701 A0A0A6YYK5 440 aaPredicted RBP16.72■□□□□ 0.27
SEMA3B-212ENST00000616701 IQCA1LA6NCM1 817 aa16.72■□□□□ 0.27
SEMA3B-212ENST00000616701 ATP8B1O43520 1251 aa16.72■□□□□ 0.27
SEMA3B-212ENST00000616701 PSMD6Q15008 389 aa16.72■□□□□ 0.27
SEMA3B-212ENST00000616701 ARMC3Q5W041 872 aa16.72■□□□□ 0.27
SEMA3B-212ENST00000616701 CCNI2Q6ZMN8 369 aaPredicted RBP16.72■□□□□ 0.27
SEMA3B-212ENST00000616701 ATP8B4Q8TF62 1192 aa16.72■□□□□ 0.27
SEMA3B-212ENST00000616701 PPP1R13LQ8WUF5 828 aa16.72■□□□□ 0.27
SEMA3B-212ENST00000616701 AMFRQ9UKV5 643 aa16.72■□□□□ 0.27
SEMA3B-212ENST00000616701 UMODL1Q5DID0 1318 aa16.71■□□□□ 0.27
SEMA3B-212ENST00000616701 TARSL2A2RTX5 802 aaKnown RBP16.71■□□□□ 0.27
SEMA3B-212ENST00000616701 VNN1O95497 513 aa16.71■□□□□ 0.27
SEMA3B-212ENST00000616701 ZNF211Q13398 564 aaPredicted RBP16.71■□□□□ 0.27
SEMA3B-212ENST00000616701 TRADDQ15628 312 aa16.71■□□□□ 0.27
SEMA3B-212ENST00000616701 TMEM130Q8N3G9 435 aa16.71■□□□□ 0.27
SEMA3B-212ENST00000616701 OTUD6BQ8N6M0 293 aa16.71■□□□□ 0.27
SEMA3B-212ENST00000616701 PPM1EQ8WY54 764 aa16.71■□□□□ 0.27
SEMA3B-212ENST00000616701 C1orf112Q9NSG2 853 aa16.71■□□□□ 0.27
SEMA3B-212ENST00000616701 SUCLA2Q9P2R7 463 aaPredicted RBP16.71■□□□□ 0.27
SEMA3B-212ENST00000616701 STXBP5LQ9Y2K9 1186 aa16.71■□□□□ 0.27
SEMA3B-212ENST00000616701 A0A0B4J269 797 aa16.71■□□□□ 0.27
SEMA3B-212ENST00000616701 PMM2O15305 246 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms