RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 GRM6O15303 877 aa18.11■□□□□ 0.49
IRF1-211ENST00000613424 FGF18O76093 207 aa18.11■□□□□ 0.49
IRF1-211ENST00000613424 IGFBP4P22692 258 aa18.11■□□□□ 0.49
IRF1-211ENST00000613424 SLC11A1P49279 550 aa18.11■□□□□ 0.49
IRF1-211ENST00000613424 ACOT2P49753 483 aa18.11■□□□□ 0.49
IRF1-211ENST00000613424 DSC1Q08554 894 aa18.11■□□□□ 0.49
IRF1-211ENST00000613424 NAB2Q15742 525 aa18.11■□□□□ 0.49
IRF1-211ENST00000613424 KNOP1Q1ED39 458 aaKnown RBP18.11■□□□□ 0.49
IRF1-211ENST00000613424 ZSWIM2Q8NEG5 633 aa18.11■□□□□ 0.49
IRF1-211ENST00000613424 SPPL3Q8TCT6 385 aa18.11■□□□□ 0.49
IRF1-211ENST00000613424 SMARCE1Q969G3 411 aa18.11■□□□□ 0.49
IRF1-211ENST00000613424 GSDMAQ96QA5 445 aa18.11■□□□□ 0.49
IRF1-211ENST00000613424 CBWD1Q9BRT8 395 aa18.11■□□□□ 0.49
IRF1-211ENST00000613424 PCIF1Q9H4Z3 704 aa18.11■□□□□ 0.49
IRF1-211ENST00000613424 RPF1Q9H9Y2 349 aaKnown RBP18.11■□□□□ 0.49
IRF1-211ENST00000613424 SPG21Q9NZD8 308 aa18.11■□□□□ 0.49
IRF1-211ENST00000613424 CNTN3Q9P232 1028 aa18.11■□□□□ 0.49
IRF1-211ENST00000613424 FAN1Q9Y2M0 1017 aa18.11■□□□□ 0.49
IRF1-211ENST00000613424 TDRD15B5MCY1 1934 aaKnown RBP18.11■□□□□ 0.49
IRF1-211ENST00000613424 TRIP11Q15643 1979 aa18.11■□□□□ 0.49
IRF1-211ENST00000613424 NRP1O14786 923 aa18.1■□□□□ 0.49
IRF1-211ENST00000613424 CXCL8P10145 99 aa18.1■□□□□ 0.49
IRF1-211ENST00000613424 KCNE1P15382 129 aa18.1■□□□□ 0.49
IRF1-211ENST00000613424 POU3F3P20264 500 aaPredicted RBP18.1■□□□□ 0.49
IRF1-211ENST00000613424 OR1G1P47890 313 aa18.1■□□□□ 0.49
IRF1-211ENST00000613424 PLCB3Q01970 1234 aa18.1■□□□□ 0.49
IRF1-211ENST00000613424 ENOX2Q16206 610 aaKnown RBP18.1■□□□□ 0.49
IRF1-211ENST00000613424 GLRA4Q5JXX5 417 aa18.1■□□□□ 0.49
IRF1-211ENST00000613424 ARMCX5Q6P1M9 558 aa18.1■□□□□ 0.49
IRF1-211ENST00000613424 CRELD2Q6UXH1 353 aaPredicted RBP18.1■□□□□ 0.49
IRF1-211ENST00000613424 SLC39A11Q8N1S5 342 aa18.1■□□□□ 0.49
IRF1-211ENST00000613424 ZMAT2Q96NC0 199 aaKnown RBP18.1■□□□□ 0.49
IRF1-211ENST00000613424 PPP1R10Q96QC0 940 aaKnown RBP18.1■□□□□ 0.49
IRF1-211ENST00000613424 PLEKHA5Q9HAU0 1116 aa18.1■□□□□ 0.49
IRF1-211ENST00000613424 RMND1Q9NWS8 449 aa18.1■□□□□ 0.49
IRF1-211ENST00000613424 TRANK1O15050 2925 aa18.1■□□□□ 0.49
IRF1-211ENST00000613424 TTC26A0AVF1 554 aa18.09■□□□□ 0.49
IRF1-211ENST00000613424 CARNS1A5YM72 827 aa18.09■□□□□ 0.49
IRF1-211ENST00000613424 LACTBL1A8MY62 500 aa18.09■□□□□ 0.49
IRF1-211ENST00000613424 GOLGA6L22H0YM25 854 aa18.09■□□□□ 0.49
IRF1-211ENST00000613424 CLIC2O15247 247 aa18.09■□□□□ 0.49
IRF1-211ENST00000613424 LDHAP00338 332 aaKnown RBP18.09■□□□□ 0.49
IRF1-211ENST00000613424 ADRB2P07550 413 aa18.09■□□□□ 0.49
IRF1-211ENST00000613424 FOSL2P15408 326 aa18.09■□□□□ 0.49
IRF1-211ENST00000613424 DNAJB1P25685 340 aa18.09■□□□□ 0.49
IRF1-211ENST00000613424 PPM1AP35813 382 aa18.09■□□□□ 0.49
IRF1-211ENST00000613424 SNRPFP62306 86 aaKnown RBP18.09■□□□□ 0.49
IRF1-211ENST00000613424 TUSC3Q13454 348 aa18.09■□□□□ 0.49
IRF1-211ENST00000613424 TMEM173Q86WV6 379 aaPredicted RBP18.09■□□□□ 0.49
IRF1-211ENST00000613424 POF1BQ8WVV4 589 aa18.09■□□□□ 0.49
IRF1-211ENST00000613424 SAAL1Q96ER3 474 aa18.09■□□□□ 0.49
IRF1-211ENST00000613424 FAM213AQ9BRX8 229 aa18.09■□□□□ 0.49
IRF1-211ENST00000613424 AGPAT3Q9NRZ7 376 aa18.09■□□□□ 0.49
IRF1-211ENST00000613424 MTCH2Q9Y6C9 303 aa18.09■□□□□ 0.49
IRF1-211ENST00000613424 CITO14578 2027 aa18.09■□□□□ 0.49
IRF1-211ENST00000613424 GOLGA8IPA6NC78 632 aa18.08■□□□□ 0.48
IRF1-211ENST00000613424 GOLGA8JA6NMD2 632 aa18.08■□□□□ 0.48
IRF1-211ENST00000613424 EXTL3O43909 919 aa18.08■□□□□ 0.48
IRF1-211ENST00000613424 KRT17Q04695 432 aa18.08■□□□□ 0.48
IRF1-211ENST00000613424 CAMK4Q16566 473 aa18.08■□□□□ 0.48
IRF1-211ENST00000613424 HS2ST1Q7LGA3 356 aa18.08■□□□□ 0.48
IRF1-211ENST00000613424 BCL7CQ8WUZ0 217 aaPredicted RBP18.08■□□□□ 0.48
IRF1-211ENST00000613424 RABGGTAQ92696 567 aa18.08■□□□□ 0.48
IRF1-211ENST00000613424 MRPL38Q96DV4 380 aaKnown RBP18.08■□□□□ 0.48
IRF1-211ENST00000613424 FAM212AQ96EL1 285 aa18.08■□□□□ 0.48
IRF1-211ENST00000613424 IGSF21Q96ID5 467 aa18.08■□□□□ 0.48
IRF1-211ENST00000613424 LMAN2LQ9H0V9 348 aa18.08■□□□□ 0.48
IRF1-211ENST00000613424 KCTD10Q9H3F6 313 aa18.08■□□□□ 0.48
IRF1-211ENST00000613424 HSPBP1Q9NZL4 362 aa18.08■□□□□ 0.48
IRF1-211ENST00000613424 LMCD1Q9NZU5 365 aa18.08■□□□□ 0.48
IRF1-211ENST00000613424 CGNQ9P2M7 1197 aaKnown RBP18.08■□□□□ 0.48
IRF1-211ENST00000613424 CACNG4Q9UBN1 327 aa18.08■□□□□ 0.48
IRF1-211ENST00000613424 MAPK8IP1Q9UQF2 711 aa18.08■□□□□ 0.48
IRF1-211ENST00000613424 COL4A4P53420 1690 aaPredicted RBP18.08■□□□□ 0.48
IRF1-211ENST00000613424 CASTOR2A6NHX0 329 aa18.07■□□□□ 0.48
IRF1-211ENST00000613424 KIAA0391O15091 583 aaKnown RBP18.07■□□□□ 0.48
IRF1-211ENST00000613424 KIF20AO95235 890 aa18.07■□□□□ 0.48
IRF1-211ENST00000613424 POU5F1Q01860 360 aaKnown RBP18.07■□□□□ 0.48
IRF1-211ENST00000613424 UBE3AQ05086 875 aa18.07■□□□□ 0.48
IRF1-211ENST00000613424 PPP2R3AQ06190 1150 aa18.07■□□□□ 0.48
IRF1-211ENST00000613424 SPAG1Q07617 926 aa18.07■□□□□ 0.48
IRF1-211ENST00000613424 CAMK1Q14012 370 aa18.07■□□□□ 0.48
IRF1-211ENST00000613424 PTPROQ16827 1216 aa18.07■□□□□ 0.48
IRF1-211ENST00000613424 ZNF658Q5TYW1 1059 aaPredicted RBP18.07■□□□□ 0.48
IRF1-211ENST00000613424 ISM2Q6H9L7 571 aa18.07■□□□□ 0.48
IRF1-211ENST00000613424 CD302Q8IX05 232 aa18.07■□□□□ 0.48
IRF1-211ENST00000613424 SMYD4Q8IYR2 804 aaPredicted RBP18.07■□□□□ 0.48
IRF1-211ENST00000613424 GPD1LQ8N335 351 aa18.07■□□□□ 0.48
IRF1-211ENST00000613424 GUF1Q8N442 669 aaKnown RBP18.07■□□□□ 0.48
IRF1-211ENST00000613424 NOC3LQ8WTT2 800 aaKnown RBP18.07■□□□□ 0.48
IRF1-211ENST00000613424 TMEM169Q96HH4 297 aa18.07■□□□□ 0.48
IRF1-211ENST00000613424 PAAF1Q9BRP4 392 aa18.07■□□□□ 0.48
IRF1-211ENST00000613424 COLEC11Q9BWP8 271 aa18.07■□□□□ 0.48
IRF1-211ENST00000613424 PUF60Q9UHX1 559 aaKnown RBP18.07■□□□□ 0.48
IRF1-211ENST00000613424 MAN1B1Q9UKM7 699 aa18.07■□□□□ 0.48
IRF1-211ENST00000613424 LZTS1Q9Y250 596 aa18.07■□□□□ 0.48
IRF1-211ENST00000613424 STXBP5LQ9Y2K9 1186 aa18.07■□□□□ 0.48
IRF1-211ENST00000613424 PRG3Q9Y2Y8 225 aaPredicted RBP18.07■□□□□ 0.48
IRF1-211ENST00000613424 PLXNA4Q9HCM2 1894 aa18.07■□□□□ 0.48
IRF1-211ENST00000613424 F8W810 466 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms