RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 GJA10Q969M2 543 aa11.48□□□□□ -0.57
SSX3-204ENST00000612497 LENG9Q96B70 501 aa11.48□□□□□ -0.57
SSX3-204ENST00000612497 RIT2Q99578 217 aa11.48□□□□□ -0.57
SSX3-204ENST00000612497 TRIM6Q9C030 488 aaPredicted RBP11.48□□□□□ -0.57
SSX3-204ENST00000612497 RBM12Q9NTZ6 932 aaKnown RBP11.48□□□□□ -0.57
SSX3-204ENST00000612497 RBM28Q9NW13 759 aaKnown RBP11.48□□□□□ -0.57
SSX3-204ENST00000612497 GIT1Q9Y2X7 761 aa11.48□□□□□ -0.57
SSX3-204ENST00000612497 COL4A2P08572 1712 aa11.48□□□□□ -0.57
SSX3-204ENST00000612497 VWA8A3KMH1 1905 aa11.47□□□□□ -0.57
SSX3-204ENST00000612497 TAF4O00268 1085 aa11.47□□□□□ -0.57
SSX3-204ENST00000612497 ADAMTS3O15072 1205 aa11.47□□□□□ -0.57
SSX3-204ENST00000612497 PAPSS2O95340 614 aaPredicted RBP11.47□□□□□ -0.57
SSX3-204ENST00000612497 AKAP5P24588 427 aa11.47□□□□□ -0.57
SSX3-204ENST00000612497 CIITAP33076 1130 aa11.47□□□□□ -0.57
SSX3-204ENST00000612497 OR1D2P34982 312 aa11.47□□□□□ -0.57
SSX3-204ENST00000612497 RBM25P49756 843 aaKnown RBP11.47□□□□□ -0.57
SSX3-204ENST00000612497 NCBP1Q09161 790 aaKnown RBP11.47□□□□□ -0.57
SSX3-204ENST00000612497 LAMTOR4Q0VGL1 99 aa11.47□□□□□ -0.57
SSX3-204ENST00000612497 GRIK3Q13003 919 aa11.47□□□□□ -0.57
SSX3-204ENST00000612497 RAB33AQ14088 237 aa11.47□□□□□ -0.57
SSX3-204ENST00000612497 PLA2G4FQ68DD2 849 aa11.47□□□□□ -0.57
SSX3-204ENST00000612497 PDXDC1Q6P996 788 aa11.47□□□□□ -0.57
SSX3-204ENST00000612497 Q6ZS52 159 aa11.47□□□□□ -0.57
SSX3-204ENST00000612497 CACNA2D4Q7Z3S7 1137 aa11.47□□□□□ -0.57
SSX3-204ENST00000612497 WDR5BQ86VZ2 330 aa11.47□□□□□ -0.57
SSX3-204ENST00000612497 MAP4K3Q8IVH8 894 aa11.47□□□□□ -0.57
SSX3-204ENST00000612497 PSPC1Q8WXF1 523 aaKnown RBP11.47□□□□□ -0.57
SSX3-204ENST00000612497 SLC7A3Q8WY07 619 aa11.47□□□□□ -0.57
SSX3-204ENST00000612497 GATA6Q92908 595 aa11.47□□□□□ -0.57
SSX3-204ENST00000612497 TMEM143Q96AN5 459 aa11.47□□□□□ -0.57
SSX3-204ENST00000612497 KIF12Q96FN5 646 aa11.47□□□□□ -0.57
SSX3-204ENST00000612497 CPB2Q96IY4 423 aa11.47□□□□□ -0.57
SSX3-204ENST00000612497 PAAF1Q9BRP4 392 aa11.47□□□□□ -0.57
SSX3-204ENST00000612497 SCNM1Q9BWG6 230 aa11.47□□□□□ -0.57
SSX3-204ENST00000612497 TRPV5Q9NQA5 729 aa11.47□□□□□ -0.57
SSX3-204ENST00000612497 KLK14Q9P0G3 267 aa11.47□□□□□ -0.57
SSX3-204ENST00000612497 WASF3Q9UPY6 502 aa11.47□□□□□ -0.57
SSX3-204ENST00000612497 ZNF263O14978 683 aa11.46□□□□□ -0.57
SSX3-204ENST00000612497 TSPAN1O60635 241 aa11.46□□□□□ -0.57
SSX3-204ENST00000612497 RPP40O75818 363 aaKnown RBP11.46□□□□□ -0.57
SSX3-204ENST00000612497 PTPN2P17706 415 aa11.46□□□□□ -0.57
SSX3-204ENST00000612497 PSMC3P17980 439 aa11.46□□□□□ -0.57
SSX3-204ENST00000612497 AXLP30530 894 aa11.46□□□□□ -0.57
SSX3-204ENST00000612497 HOXC13P31276 330 aa11.46□□□□□ -0.57
SSX3-204ENST00000612497 MPLP40238 635 aa11.46□□□□□ -0.57
SSX3-204ENST00000612497 RAP1GAPP47736 663 aa11.46□□□□□ -0.57
SSX3-204ENST00000612497 FUT2Q10981 343 aa11.46□□□□□ -0.57
SSX3-204ENST00000612497 RTN1Q16799 776 aa11.46□□□□□ -0.57
SSX3-204ENST00000612497 PLA2G2CQ5R387 149 aa11.46□□□□□ -0.57
SSX3-204ENST00000612497 SH3PXD2AQ5TCZ1 1133 aa11.46□□□□□ -0.57
SSX3-204ENST00000612497 VITQ6UXI7 678 aa11.46□□□□□ -0.57
SSX3-204ENST00000612497 ANO5Q75V66 913 aa11.46□□□□□ -0.57
SSX3-204ENST00000612497 RTL10Q7L3V2 364 aa11.46□□□□□ -0.57
SSX3-204ENST00000612497 KBTBD6Q86V97 674 aa11.46□□□□□ -0.57
SSX3-204ENST00000612497 SMC5Q8IY18 1101 aa11.46□□□□□ -0.57
SSX3-204ENST00000612497 RNF149Q8NC42 400 aa11.46□□□□□ -0.57
SSX3-204ENST00000612497 GSTCDQ8NEC7 633 aa11.46□□□□□ -0.57
SSX3-204ENST00000612497 RDM1Q8NG50 284 aa11.46□□□□□ -0.57
SSX3-204ENST00000612497 GAB3Q8WWW8 586 aa11.46□□□□□ -0.57
SSX3-204ENST00000612497 SLC5A5Q92911 643 aa11.46□□□□□ -0.57
SSX3-204ENST00000612497 CCDC51Q96ER9 411 aa11.46□□□□□ -0.57
SSX3-204ENST00000612497 CCDC136Q96JN2 1154 aa11.46□□□□□ -0.57
SSX3-204ENST00000612497 CSRNP2Q9H175 543 aa11.46□□□□□ -0.57
SSX3-204ENST00000612497 NXF3Q9H4D5 531 aaKnown RBP11.46□□□□□ -0.57
SSX3-204ENST00000612497 C6orf50Q9HD87 102 aa11.46□□□□□ -0.57
SSX3-204ENST00000612497 VPS45Q9NRW7 570 aa11.46□□□□□ -0.57
SSX3-204ENST00000612497 C2orf42Q9NWW7 574 aa11.46□□□□□ -0.57
SSX3-204ENST00000612497 RBM8AQ9Y5S9 174 aaKnown RBP11.46□□□□□ -0.57
SSX3-204ENST00000612497 ADAMTS20P59510 1910 aa11.46□□□□□ -0.58
SSX3-204ENST00000612497 LOC400499M0QZD8 3231 aa11.46□□□□□ -0.58
SSX3-204ENST00000612497 ATG2BQ96BY7 2078 aa11.45□□□□□ -0.58
SSX3-204ENST00000612497 CASTOR2A6NHX0 329 aa11.45□□□□□ -0.58
SSX3-204ENST00000612497 C4orf47A7E2U8 309 aa11.45□□□□□ -0.58
SSX3-204ENST00000612497 NRG2O14511 850 aaPredicted RBP11.45□□□□□ -0.58
SSX3-204ENST00000612497 KIF4AO95239 1232 aa11.45□□□□□ -0.58
SSX3-204ENST00000612497 LRG1P02750 347 aa11.45□□□□□ -0.58
SSX3-204ENST00000612497 CCDC192P0DO97 292 aa11.45□□□□□ -0.58
SSX3-204ENST00000612497 HOXA6P31267 233 aa11.45□□□□□ -0.58
SSX3-204ENST00000612497 NPEPPSP55786 919 aa11.45□□□□□ -0.58
SSX3-204ENST00000612497 NUCB1Q02818 461 aa11.45□□□□□ -0.58
SSX3-204ENST00000612497 DAB2IPQ5VWQ8 1189 aa11.45□□□□□ -0.58
SSX3-204ENST00000612497 TCEAL6Q6IPX3 200 aa11.45□□□□□ -0.58
SSX3-204ENST00000612497 SGMS1Q86VZ5 419 aa11.45□□□□□ -0.58
SSX3-204ENST00000612497 CSGALNACT1Q8TDX6 532 aa11.45□□□□□ -0.58
SSX3-204ENST00000612497 TCEAL3Q969E4 200 aa11.45□□□□□ -0.58
SSX3-204ENST00000612497 TCEAL4Q96EI5 215 aa11.45□□□□□ -0.58
SSX3-204ENST00000612497 ASB16Q96NS5 453 aa11.45□□□□□ -0.58
SSX3-204ENST00000612497 CORO1BQ9BR76 489 aa11.45□□□□□ -0.58
SSX3-204ENST00000612497 EDEM2Q9BV94 578 aa11.45□□□□□ -0.58
SSX3-204ENST00000612497 AVENQ9NQS1 362 aaPredicted RBP11.45□□□□□ -0.58
SSX3-204ENST00000612497 BMP2KQ9NSY1 1161 aaPredicted RBP11.45□□□□□ -0.58
SSX3-204ENST00000612497 PARP2Q9UGN5 583 aa11.45□□□□□ -0.58
SSX3-204ENST00000612497 PCDHGA5Q9Y5G8 931 aa11.45□□□□□ -0.58
SSX3-204ENST00000612497 ITPR1Q14643 2758 aa11.45□□□□□ -0.58
SSX3-204ENST00000612497 INO80B-WBP1J3KQ70 363 aa11.44□□□□□ -0.58
SSX3-204ENST00000612497 ZNF197O14709 1029 aa11.44□□□□□ -0.58
SSX3-204ENST00000612497 PSMD10O75832 226 aa11.44□□□□□ -0.58
SSX3-204ENST00000612497 CHMLP26374 656 aa11.44□□□□□ -0.58
SSX3-204ENST00000612497 VIPR2P41587 438 aa11.44□□□□□ -0.58
SSX3-204ENST00000612497 PXNP49023 591 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms