RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 EFCC1Q9HA90 598 aa15.8■□□□□ 0.12
CDH1-213ENST00000612417 SEPT11Q9NVA2 429 aaKnown RBP15.8■□□□□ 0.12
CDH1-213ENST00000612417 TELO2Q9Y4R8 837 aa15.8■□□□□ 0.12
CDH1-213ENST00000612417 MCM3APO60318 1980 aa15.8■□□□□ 0.12
CDH1-213ENST00000612417 DKC1O60832 514 aaKnown RBP eCLIP15.79■□□□□ 0.12
CDH1-213ENST00000612417 GZMAP12544 262 aa15.79■□□□□ 0.12
CDH1-213ENST00000612417 NCKAP1LP55160 1127 aa15.79■□□□□ 0.12
CDH1-213ENST00000612417 DR1Q01658 176 aa15.79■□□□□ 0.12
CDH1-213ENST00000612417 OTUD6AQ7L8S5 288 aa15.79■□□□□ 0.12
CDH1-213ENST00000612417 HAUS6Q7Z4H7 955 aa15.79■□□□□ 0.12
CDH1-213ENST00000612417 MORC4Q8TE76 937 aa15.79■□□□□ 0.12
CDH1-213ENST00000612417 RPS6KC1Q96S38 1066 aa15.79■□□□□ 0.12
CDH1-213ENST00000612417 ERP44Q9BS26 406 aa15.79■□□□□ 0.12
CDH1-213ENST00000612417 PCIF1Q9H4Z3 704 aa15.79■□□□□ 0.12
CDH1-213ENST00000612417 ANKEF1Q9NU02 776 aa15.79■□□□□ 0.12
CDH1-213ENST00000612417 GEMIN8Q9NWZ8 242 aaKnown RBP15.79■□□□□ 0.12
CDH1-213ENST00000612417 SLC12A6Q9UHW9 1150 aa15.79■□□□□ 0.12
CDH1-213ENST00000612417 SLC45A1Q9Y2W3 748 aa15.79■□□□□ 0.12
CDH1-213ENST00000612417 ALG6Q9Y672 507 aa15.79■□□□□ 0.12
CDH1-213ENST00000612417 TISP43B9A030 160 aa15.79■□□□□ 0.12
CDH1-213ENST00000612417 RTN2O75298 545 aa15.79■□□□□ 0.12
CDH1-213ENST00000612417 FTLP02792 175 aaPredicted RBP15.79■□□□□ 0.12
CDH1-213ENST00000612417 EDNRBP24530 442 aa15.79■□□□□ 0.12
CDH1-213ENST00000612417 GCLMP48507 274 aa15.79■□□□□ 0.12
CDH1-213ENST00000612417 MXI1P50539 228 aa15.79■□□□□ 0.12
CDH1-213ENST00000612417 HUNKP57058 714 aa15.79■□□□□ 0.12
CDH1-213ENST00000612417 GPC5P78333 572 aa15.79■□□□□ 0.12
CDH1-213ENST00000612417 CST9Q5W186 159 aa15.79■□□□□ 0.12
CDH1-213ENST00000612417 ANKRD23Q86SG2 305 aa15.79■□□□□ 0.12
CDH1-213ENST00000612417 FAM71AQ8IYT1 594 aa15.79■□□□□ 0.12
CDH1-213ENST00000612417 UBL4BQ8N7F7 174 aa15.79■□□□□ 0.12
CDH1-213ENST00000612417 PLEKHO2Q8TD55 490 aa15.79■□□□□ 0.12
CDH1-213ENST00000612417 UBLCP1Q8WVY7 318 aaPredicted RBP15.79■□□□□ 0.12
CDH1-213ENST00000612417 FMO2Q99518 471 aa15.79■□□□□ 0.12
CDH1-213ENST00000612417 ANKRD65E5RJM6 399 aa15.78■□□□□ 0.12
CDH1-213ENST00000612417 EIF3BP55884 814 aaKnown RBP15.78■□□□□ 0.12
CDH1-213ENST00000612417 DHX9Q08211 1270 aaKnown RBP15.78■□□□□ 0.12
CDH1-213ENST00000612417 SKIDA1Q1XH10 827 aa15.78■□□□□ 0.12
CDH1-213ENST00000612417 NAA35Q5VZE5 725 aa15.78■□□□□ 0.12
CDH1-213ENST00000612417 ABHD15Q6UXT9 468 aa15.78■□□□□ 0.12
CDH1-213ENST00000612417 SHCBP1Q8NEM2 672 aa15.78■□□□□ 0.12
CDH1-213ENST00000612417 OR2W6PQ8NHA6 318 aa15.78■□□□□ 0.12
CDH1-213ENST00000612417 EPS8L1Q8TE68 723 aa15.78■□□□□ 0.12
CDH1-213ENST00000612417 HVCN1Q96D96 273 aa15.78■□□□□ 0.12
CDH1-213ENST00000612417 TRIM51Q9BSJ1 452 aa15.78■□□□□ 0.12
CDH1-213ENST00000612417 TMEM117Q9H0C3 514 aa15.78■□□□□ 0.12
CDH1-213ENST00000612417 ERVK-5Q9HDB9 667 aa15.78■□□□□ 0.12
CDH1-213ENST00000612417 ZDHHC18Q9NUE0 388 aa15.78■□□□□ 0.12
CDH1-213ENST00000612417 CTTNBP2NLQ9P2B4 639 aa15.78■□□□□ 0.12
CDH1-213ENST00000612417 GGA2Q9UJY4 613 aa15.78■□□□□ 0.12
CDH1-213ENST00000612417 NOCTQ9UK39 431 aaKnown RBP15.78■□□□□ 0.12
CDH1-213ENST00000612417 ARID2Q68CP9 1835 aa15.78■□□□□ 0.12
CDH1-213ENST00000612417 GGPS1O95749 300 aa15.77■□□□□ 0.12
CDH1-213ENST00000612417 SUPT20HL2P0C7V6 817 aa15.77■□□□□ 0.12
CDH1-213ENST00000612417 UBA1P22314 1058 aaKnown RBP15.77■□□□□ 0.12
CDH1-213ENST00000612417 PRPF4BQ13523 1007 aaKnown RBP15.77■□□□□ 0.12
CDH1-213ENST00000612417 FAM102BQ5T8I3 360 aa15.77■□□□□ 0.12
CDH1-213ENST00000612417 ANO5Q75V66 913 aa15.77■□□□□ 0.12
CDH1-213ENST00000612417 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.77■□□□□ 0.12
CDH1-213ENST00000612417 CCDC60Q8IWA6 550 aaPredicted RBP15.77■□□□□ 0.12
CDH1-213ENST00000612417 RPUSD2Q8IZ73 545 aaKnown RBP15.77■□□□□ 0.12
CDH1-213ENST00000612417 C3orf20Q8ND61 904 aa15.77■□□□□ 0.12
CDH1-213ENST00000612417 CEP170P1Q96L14 293 aa15.77■□□□□ 0.12
CDH1-213ENST00000612417 ZSWIM1Q9BR11 485 aa15.77■□□□□ 0.12
CDH1-213ENST00000612417 DPH5Q9H2P9 285 aa15.77■□□□□ 0.12
CDH1-213ENST00000612417 RABEP2Q9H5N1 569 aa15.77■□□□□ 0.12
CDH1-213ENST00000612417 SEPT9Q9UHD8 586 aaPredicted RBP15.77■□□□□ 0.12
CDH1-213ENST00000612417 DNAJC25-GNG10A0A024R161 153 aa15.77■□□□□ 0.11
CDH1-213ENST00000612417 ZNF862O60290 1169 aa15.77■□□□□ 0.11
CDH1-213ENST00000612417 PHF2O75151 1096 aa15.77■□□□□ 0.11
CDH1-213ENST00000612417 FAM107AO95990 144 aa15.77■□□□□ 0.11
CDH1-213ENST00000612417 CHRNB2P17787 502 aa15.77■□□□□ 0.11
CDH1-213ENST00000612417 GCLCP48506 637 aaPredicted RBP15.77■□□□□ 0.11
CDH1-213ENST00000612417 CHADLQ6NUI6 762 aa15.77■□□□□ 0.11
CDH1-213ENST00000612417 MYCBPAPQ8TBZ2 947 aa15.77■□□□□ 0.11
CDH1-213ENST00000612417 SHC3Q92529 594 aa15.77■□□□□ 0.11
CDH1-213ENST00000612417 PCYOX1Q9UHG3 505 aa15.77■□□□□ 0.11
CDH1-213ENST00000612417 RASAL2Q9UJF2 1139 aa15.77■□□□□ 0.11
CDH1-213ENST00000612417 COQ4Q9Y3A0 265 aa15.77■□□□□ 0.11
CDH1-213ENST00000612417 TRPM7Q96QT4 1865 aa15.76■□□□□ 0.11
CDH1-213ENST00000612417 ERLIN2O94905 339 aa15.76■□□□□ 0.11
CDH1-213ENST00000612417 ADRB2P07550 413 aa15.76■□□□□ 0.11
CDH1-213ENST00000612417 PAEPP09466 180 aa15.76■□□□□ 0.11
CDH1-213ENST00000612417 CTNNA2P26232 953 aa15.76■□□□□ 0.11
CDH1-213ENST00000612417 CHRNA3P32297 505 aa15.76■□□□□ 0.11
CDH1-213ENST00000612417 GBP1P32455 592 aa15.76■□□□□ 0.11
CDH1-213ENST00000612417 PSEN1P49768 467 aa15.76■□□□□ 0.11
CDH1-213ENST00000612417 PRKCEQ02156 737 aa15.76■□□□□ 0.11
CDH1-213ENST00000612417 ZNF211Q13398 564 aaPredicted RBP15.76■□□□□ 0.11
CDH1-213ENST00000612417 NEDD9Q14511 834 aa15.76■□□□□ 0.11
CDH1-213ENST00000612417 LY6KQ17RY6 165 aa15.76■□□□□ 0.11
CDH1-213ENST00000612417 YTHDF3Q7Z739 585 aaKnown RBP15.76■□□□□ 0.11
CDH1-213ENST00000612417 NLRP14Q86W24 1093 aa15.76■□□□□ 0.11
CDH1-213ENST00000612417 JAMLQ86YT9 394 aa15.76■□□□□ 0.11
CDH1-213ENST00000612417 ZNF473Q8WTR7 871 aaKnown RBP15.76■□□□□ 0.11
CDH1-213ENST00000612417 CD101Q93033 1021 aa15.76■□□□□ 0.11
CDH1-213ENST00000612417 FGD4Q96M96 766 aa15.76■□□□□ 0.11
CDH1-213ENST00000612417 WNT8AQ9H1J5 351 aa15.76■□□□□ 0.11
CDH1-213ENST00000612417 ZNF302Q9NR11 478 aa15.76■□□□□ 0.11
CDH1-213ENST00000612417 EXOC7Q9UPT5 735 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms