RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 URGCPQ8TCY9 931 aa9.51□□□□□ -0.89
SNCA-212ENST00000611107 SUSD6Q92537 303 aa9.51□□□□□ -0.89
SNCA-212ENST00000611107 TMEM169Q96HH4 297 aa9.51□□□□□ -0.89
SNCA-212ENST00000611107 DRC1Q96MC2 740 aa9.51□□□□□ -0.89
SNCA-212ENST00000611107 KLHL5Q96PQ7 755 aa9.51□□□□□ -0.89
SNCA-212ENST00000611107 NTPCRQ9BSD7 190 aaKnown RBP9.51□□□□□ -0.89
SNCA-212ENST00000611107 C2orf40Q9H1Z8 148 aa9.51□□□□□ -0.89
SNCA-212ENST00000611107 TMEM134Q9H6X4 195 aa9.51□□□□□ -0.89
SNCA-212ENST00000611107 KMT5AQ9NQR1 393 aa9.51□□□□□ -0.89
SNCA-212ENST00000611107 RNF216Q9NWF9 866 aaPredicted RBP9.51□□□□□ -0.89
SNCA-212ENST00000611107 FAM13BQ9NYF5 915 aa9.51□□□□□ -0.89
SNCA-212ENST00000611107 KCNH3Q9ULD8 1083 aa9.51□□□□□ -0.89
SNCA-212ENST00000611107 TNFSF13BQ9Y275 285 aa9.51□□□□□ -0.89
SNCA-212ENST00000611107 GIT1Q9Y2X7 761 aa9.51□□□□□ -0.89
SNCA-212ENST00000611107 HCFC2Q9Y5Z7 792 aa9.51□□□□□ -0.89
SNCA-212ENST00000611107 ANKRD63C9JTQ0 380 aa9.5□□□□□ -0.89
SNCA-212ENST00000611107 I3L4J1 428 aa9.5□□□□□ -0.89
SNCA-212ENST00000611107 FAM189A1O60320 539 aa9.5□□□□□ -0.89
SNCA-212ENST00000611107 KIF4AO95239 1232 aa9.5□□□□□ -0.89
SNCA-212ENST00000611107 ALDH2P05091 517 aa9.5□□□□□ -0.89
SNCA-212ENST00000611107 SPATA31D3P0C874 917 aa9.5□□□□□ -0.89
SNCA-212ENST00000611107 HARSP12081 509 aaKnown RBP9.5□□□□□ -0.89
SNCA-212ENST00000611107 SP100P23497 879 aaPredicted RBP9.5□□□□□ -0.89
SNCA-212ENST00000611107 CA8P35219 290 aa9.5□□□□□ -0.89
SNCA-212ENST00000611107 TNFSF9P41273 254 aa9.5□□□□□ -0.89
SNCA-212ENST00000611107 GUCY2FP51841 1108 aa9.5□□□□□ -0.89
SNCA-212ENST00000611107 NCKAP1LP55160 1127 aa9.5□□□□□ -0.89
SNCA-212ENST00000611107 KRT17Q04695 432 aa9.5□□□□□ -0.89
SNCA-212ENST00000611107 SPAG1Q07617 926 aa9.5□□□□□ -0.89
SNCA-212ENST00000611107 KCNA1Q09470 495 aa9.5□□□□□ -0.89
SNCA-212ENST00000611107 SMC1AQ14683 1233 aaKnown RBP9.5□□□□□ -0.89
SNCA-212ENST00000611107 PCBP1Q15365 356 aaKnown RBP eCLIP9.5□□□□□ -0.89
SNCA-212ENST00000611107 CSPP1Q1MSJ5 1256 aa9.5□□□□□ -0.89
SNCA-212ENST00000611107 TPRNQ4KMQ1 711 aa9.5□□□□□ -0.89
SNCA-212ENST00000611107 ZC2HC1CQ53FD0 456 aaPredicted RBP9.5□□□□□ -0.89
SNCA-212ENST00000611107 RTP2Q5QGT7 225 aa9.5□□□□□ -0.89
SNCA-212ENST00000611107 PRSS55Q6UWB4 352 aaPredicted RBP9.5□□□□□ -0.89
SNCA-212ENST00000611107 CLEC17AQ6ZS10 378 aa9.5□□□□□ -0.89
SNCA-212ENST00000611107 SPATA31D4Q6ZUB0 917 aa9.5□□□□□ -0.89
SNCA-212ENST00000611107 GJD3Q8N144 294 aa9.5□□□□□ -0.89
SNCA-212ENST00000611107 CNNM3Q8NE01 707 aa9.5□□□□□ -0.89
SNCA-212ENST00000611107 GLIS3Q8NEA6 775 aa9.5□□□□□ -0.89
SNCA-212ENST00000611107 STAMQ92783 540 aa9.5□□□□□ -0.89
SNCA-212ENST00000611107 C18orf25Q96B23 403 aaPredicted RBP9.5□□□□□ -0.89
SNCA-212ENST00000611107 DNAJC19Q96DA6 116 aa9.5□□□□□ -0.89
SNCA-212ENST00000611107 FAM84AQ96KN4 292 aa9.5□□□□□ -0.89
SNCA-212ENST00000611107 IFT74Q96LB3 600 aa9.5□□□□□ -0.89
SNCA-212ENST00000611107 PPP1R10Q96QC0 940 aaKnown RBP9.5□□□□□ -0.89
SNCA-212ENST00000611107 TMEM175Q9BSA9 504 aa9.5□□□□□ -0.89
SNCA-212ENST00000611107 HERC2P3Q9BVR0 1158 aa9.5□□□□□ -0.89
SNCA-212ENST00000611107 TIPINQ9BVW5 301 aa9.5□□□□□ -0.89
SNCA-212ENST00000611107 TRIM6Q9C030 488 aaPredicted RBP9.5□□□□□ -0.89
SNCA-212ENST00000611107 TNMDQ9H2S6 317 aa9.5□□□□□ -0.89
SNCA-212ENST00000611107 CUEDC2Q9H467 287 aa9.5□□□□□ -0.89
SNCA-212ENST00000611107 KBTBD4Q9NVX7 518 aa9.5□□□□□ -0.89
SNCA-212ENST00000611107 PUF60Q9UHX1 559 aaKnown RBP9.5□□□□□ -0.89
SNCA-212ENST00000611107 ODF2LQ9ULJ1 636 aa9.5□□□□□ -0.89
SNCA-212ENST00000611107 TRIOO75962 3097 aa9.5□□□□□ -0.89
SNCA-212ENST00000611107 PHLPP2Q6ZVD8 1323 aa9.5□□□□□ -0.89
SNCA-212ENST00000611107 SMIM28A0A1B0GU29 152 aa9.49□□□□□ -0.89
SNCA-212ENST00000611107 FRMD3A2A2Y4 597 aa9.49□□□□□ -0.89
SNCA-212ENST00000611107 GADD45BO75293 160 aaPredicted RBP9.49□□□□□ -0.89
SNCA-212ENST00000611107 SOD2P04179 222 aa9.49□□□□□ -0.89
SNCA-212ENST00000611107 CASP1P29466 404 aa9.49□□□□□ -0.89
SNCA-212ENST00000611107 GRM5P41594 1212 aa9.49□□□□□ -0.89
SNCA-212ENST00000611107 SYKP43405 635 aa9.49□□□□□ -0.89
SNCA-212ENST00000611107 BRCC3P46736 316 aa9.49□□□□□ -0.89
SNCA-212ENST00000611107 CLCN4P51793 760 aa9.49□□□□□ -0.89
SNCA-212ENST00000611107 CASP5P51878 434 aa9.49□□□□□ -0.89
SNCA-212ENST00000611107 WNT7BP56706 349 aa9.49□□□□□ -0.89
SNCA-212ENST00000611107 GRIK3Q13003 919 aa9.49□□□□□ -0.89
SNCA-212ENST00000611107 DMP1Q13316 513 aaPredicted RBP9.49□□□□□ -0.89
SNCA-212ENST00000611107 PPP2R5AQ15172 486 aa9.49□□□□□ -0.89
SNCA-212ENST00000611107 SLC10A6Q3KNW5 377 aa9.49□□□□□ -0.89
SNCA-212ENST00000611107 XKR4Q5GH76 650 aa9.49□□□□□ -0.89
SNCA-212ENST00000611107 FUT10Q6P4F1 479 aa9.49□□□□□ -0.89
SNCA-212ENST00000611107 RSPO2Q6UXX9 243 aaPredicted RBP9.49□□□□□ -0.89
SNCA-212ENST00000611107 SV2BQ7L1I2 683 aa9.49□□□□□ -0.89
SNCA-212ENST00000611107 DYMQ7RTS9 669 aa9.49□□□□□ -0.89
SNCA-212ENST00000611107 HAUS6Q7Z4H7 955 aa9.49□□□□□ -0.89
SNCA-212ENST00000611107 GLYCTKQ8IVS8 523 aa9.49□□□□□ -0.89
SNCA-212ENST00000611107 GRAMD1CQ8IYS0 662 aa9.49□□□□□ -0.89
SNCA-212ENST00000611107 FMR1NBQ8N0W7 255 aaPredicted RBP9.49□□□□□ -0.89
SNCA-212ENST00000611107 IQUBQ8NA54 791 aa9.49□□□□□ -0.89
SNCA-212ENST00000611107 SPIRE2Q8WWL2 714 aa9.49□□□□□ -0.89
SNCA-212ENST00000611107 DDX12PQ92771 950 aa9.49□□□□□ -0.89
SNCA-212ENST00000611107 HPS3Q969F9 1004 aa9.49□□□□□ -0.89
SNCA-212ENST00000611107 FAM193BQ96PV7 902 aaPredicted RBP9.49□□□□□ -0.89
SNCA-212ENST00000611107 TRIM9Q9C026 710 aa9.49□□□□□ -0.89
SNCA-212ENST00000611107 SMOC2Q9H3U7 446 aa9.49□□□□□ -0.89
SNCA-212ENST00000611107 POMKQ9H5K3 350 aa9.49□□□□□ -0.89
SNCA-212ENST00000611107 MAGEF1Q9HAY2 307 aa9.49□□□□□ -0.89
SNCA-212ENST00000611107 NGRNQ9NPE2 291 aaKnown RBP9.49□□□□□ -0.89
SNCA-212ENST00000611107 CHST7Q9NS84 486 aa9.49□□□□□ -0.89
SNCA-212ENST00000611107 KANSL3Q9P2N6 904 aa9.49□□□□□ -0.89
SNCA-212ENST00000611107 SERTAD1Q9UHV2 236 aa9.49□□□□□ -0.89
SNCA-212ENST00000611107 IRAK3Q9Y616 596 aa9.49□□□□□ -0.89
SNCA-212ENST00000611107 PPEF2O14830 753 aa9.48□□□□□ -0.89
SNCA-212ENST00000611107 TEX28O15482 410 aa9.48□□□□□ -0.89
SNCA-212ENST00000611107 NCK2O43639 380 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms