RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 TDRD10Q5VZ19 366 aaKnown RBP30.14■■■□□ 2.42
CSPG5-205ENST00000610462 IFT81Q8WYA0 676 aa30.14■■■□□ 2.42
CSPG5-205ENST00000610462 PLEKHA4Q9H4M7 779 aa30.14■■■□□ 2.42
CSPG5-205ENST00000610462 ANKFY1Q9P2R3 1169 aa30.14■■■□□ 2.42
CSPG5-205ENST00000610462 NFU1Q9UMS0 254 aa30.14■■■□□ 2.42
CSPG5-205ENST00000610462 ADGRA2Q96PE1 1338 aa30.14■■■□□ 2.41
CSPG5-205ENST00000610462 ESYT3A0FGR9 886 aa30.13■■■□□ 2.41
CSPG5-205ENST00000610462 CYP1A2P05177 515 aa30.13■■■□□ 2.41
CSPG5-205ENST00000610462 IER5Q5VY09 327 aa30.13■■■□□ 2.41
CSPG5-205ENST00000610462 ARMC9Q7Z3E5 817 aa30.13■■■□□ 2.41
CSPG5-205ENST00000610462 PRPF31Q8WWY3 499 aaKnown RBP30.13■■■□□ 2.41
CSPG5-205ENST00000610462 GLG1Q92896 1179 aa30.13■■■□□ 2.41
CSPG5-205ENST00000610462 SYT17Q9BSW7 474 aa30.13■■■□□ 2.41
CSPG5-205ENST00000610462 MIF4GDA9UHW6 222 aaKnown RBP30.13■■■□□ 2.41
CSPG5-205ENST00000610462 AGPSO00116 658 aa30.13■■■□□ 2.41
CSPG5-205ENST00000610462 SART1O43290 800 aaKnown RBP30.13■■■□□ 2.41
CSPG5-205ENST00000610462 CYP2C19P33261 490 aa30.13■■■□□ 2.41
CSPG5-205ENST00000610462 PIK3CAP42336 1068 aa30.13■■■□□ 2.41
CSPG5-205ENST00000610462 DRP2Q13474 957 aa30.13■■■□□ 2.41
CSPG5-205ENST00000610462 EXOC4Q96A65 974 aa30.13■■■□□ 2.41
CSPG5-205ENST00000610462 MROH8Q9H579 483 aa30.13■■■□□ 2.41
CSPG5-205ENST00000610462 PTPRJQ12913 1337 aa30.13■■■□□ 2.41
CSPG5-205ENST00000610462 GOLGA6BA6NDN3 693 aa30.12■■■□□ 2.41
CSPG5-205ENST00000610462 GGCXP38435 758 aa30.12■■■□□ 2.41
CSPG5-205ENST00000610462 HSDL1Q3SXM5 330 aa30.12■■■□□ 2.41
CSPG5-205ENST00000610462 ZBTB41Q5SVQ8 909 aa30.12■■■□□ 2.41
CSPG5-205ENST00000610462 ZPBP2Q6X784 338 aa30.12■■■□□ 2.41
CSPG5-205ENST00000610462 PLPPR4Q7Z2D5 763 aa30.12■■■□□ 2.41
CSPG5-205ENST00000610462 RPS6KC1Q96S38 1066 aa30.12■■■□□ 2.41
CSPG5-205ENST00000610462 SLITRK6Q9H5Y7 841 aa30.12■■■□□ 2.41
CSPG5-205ENST00000610462 GTF3C4Q9UKN8 822 aa30.12■■■□□ 2.41
CSPG5-205ENST00000610462 GAS2O43903 313 aaKnown RBP30.11■■■□□ 2.41
CSPG5-205ENST00000610462 GRIN3BO60391 1043 aa30.11■■■□□ 2.41
CSPG5-205ENST00000610462 ITGA4P13612 1032 aa30.11■■■□□ 2.41
CSPG5-205ENST00000610462 EFNA5P52803 228 aa30.11■■■□□ 2.41
CSPG5-205ENST00000610462 BIRC3Q13489 604 aa30.11■■■□□ 2.41
CSPG5-205ENST00000610462 ACAD10Q6JQN1 1059 aa30.11■■■□□ 2.41
CSPG5-205ENST00000610462 EIF1ADQ8N9N8 165 aaKnown RBP30.11■■■□□ 2.41
CSPG5-205ENST00000610462 MORC4Q8TE76 937 aa30.11■■■□□ 2.41
CSPG5-205ENST00000610462 TCP11Q8WWU5 503 aa30.11■■■□□ 2.41
CSPG5-205ENST00000610462 CGRRF1Q99675 332 aa30.11■■■□□ 2.41
CSPG5-205ENST00000610462 DDX47Q9H0S4 455 aaKnown RBP30.11■■■□□ 2.41
CSPG5-205ENST00000610462 NOP56O00567 594 aaKnown RBP30.11■■■□□ 2.41
CSPG5-205ENST00000610462 VNN1O95497 513 aa30.11■■■□□ 2.41
CSPG5-205ENST00000610462 FGGP02679 453 aa30.11■■■□□ 2.41
CSPG5-205ENST00000610462 EXOC8Q8IYI6 725 aa30.11■■■□□ 2.41
CSPG5-205ENST00000610462 RNPC3Q96LT9 517 aaKnown RBP30.11■■■□□ 2.41
CSPG5-205ENST00000610462 BHMG1C9JSJ3 638 aaPredicted RBP30.1■■■□□ 2.41
CSPG5-205ENST00000610462 RNF40O75150 1001 aa30.1■■■□□ 2.41
CSPG5-205ENST00000610462 PHACTR2O75167 634 aa30.1■■■□□ 2.41
CSPG5-205ENST00000610462 CLSTN1O94985 981 aa30.1■■■□□ 2.41
CSPG5-205ENST00000610462 MARK3P27448 753 aa30.1■■■□□ 2.41
CSPG5-205ENST00000610462 CLUL1Q15846 466 aa30.1■■■□□ 2.41
CSPG5-205ENST00000610462 CLEC16AQ2KHT3 1053 aa30.1■■■□□ 2.41
CSPG5-205ENST00000610462 ATP8B4Q8TF62 1192 aa30.1■■■□□ 2.41
CSPG5-205ENST00000610462 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP30.1■■■□□ 2.41
CSPG5-205ENST00000610462 ZNF653Q96CK0 615 aa30.1■■■□□ 2.41
CSPG5-205ENST00000610462 NAP1L3Q99457 506 aaPredicted RBP30.1■■■□□ 2.41
CSPG5-205ENST00000610462 PSD3Q9NYI0 1048 aa30.1■■■□□ 2.41
CSPG5-205ENST00000610462 CNTNAP2Q9UHC6 1331 aa30.1■■■□□ 2.41
CSPG5-205ENST00000610462 ATMINO43313 823 aaPredicted RBP30.1■■■□□ 2.41
CSPG5-205ENST00000610462 CCDC62Q6P9F0 684 aa30.1■■■□□ 2.41
CSPG5-205ENST00000610462 DHX37Q8IY37 1157 aaKnown RBP30.1■■■□□ 2.41
CSPG5-205ENST00000610462 UBL4BQ8N7F7 174 aa30.1■■■□□ 2.41
CSPG5-205ENST00000610462 TSEN2Q8NCE0 465 aaKnown RBP30.1■■■□□ 2.41
CSPG5-205ENST00000610462 TAF1DQ9H5J8 278 aaPredicted RBP30.1■■■□□ 2.41
CSPG5-205ENST00000610462 UVRAGQ9P2Y5 699 aa30.1■■■□□ 2.41
CSPG5-205ENST00000610462 LOC102724159A0A0B4J2E5 919 aa30.09■■■□□ 2.41
CSPG5-205ENST00000610462 ERVK-9P63128 1117 aa30.09■■■□□ 2.41
CSPG5-205ENST00000610462 MESDQ14696 234 aa30.09■■■□□ 2.41
CSPG5-205ENST00000610462 PWP2Q15269 919 aaKnown RBP30.09■■■□□ 2.41
CSPG5-205ENST00000610462 CDCA2Q69YH5 1023 aaPredicted RBP30.09■■■□□ 2.41
CSPG5-205ENST00000610462 TRIM50Q86XT4 487 aa30.09■■■□□ 2.41
CSPG5-205ENST00000610462 ZNF677Q86XU0 584 aa30.09■■■□□ 2.41
CSPG5-205ENST00000610462 FBXO16Q8IX29 292 aaPredicted RBP30.09■■■□□ 2.41
CSPG5-205ENST00000610462 ZNF564Q8TBZ8 553 aaPredicted RBP30.09■■■□□ 2.41
CSPG5-205ENST00000610462 ALG3Q92685 438 aa30.09■■■□□ 2.41
CSPG5-205ENST00000610462 NUP85Q9BW27 656 aa30.09■■■□□ 2.41
CSPG5-205ENST00000610462 CCDC113Q9H0I3 377 aa30.09■■■□□ 2.41
CSPG5-205ENST00000610462 TMEM110-MUSTN1A8MSY1 372 aa30.08■■■□□ 2.41
CSPG5-205ENST00000610462 ZBTB42B2RXF5 422 aa30.08■■■□□ 2.41
CSPG5-205ENST00000610462 BPIFB4P59827 614 aa30.08■■■□□ 2.41
CSPG5-205ENST00000610462 MKRN4PQ13434 485 aaPredicted RBP30.08■■■□□ 2.41
CSPG5-205ENST00000610462 MXD4Q14582 209 aaPredicted RBP30.08■■■□□ 2.41
CSPG5-205ENST00000610462 WDR78Q5VTH9 848 aa30.08■■■□□ 2.41
CSPG5-205ENST00000610462 ALS2CLQ60I27 953 aa30.08■■■□□ 2.41
CSPG5-205ENST00000610462 CCDC26Q8TAB7 109 aa30.08■■■□□ 2.41
CSPG5-205ENST00000610462 WHAMMQ8TF30 809 aa30.08■■■□□ 2.41
CSPG5-205ENST00000610462 SPATA33Q96N06 139 aa30.08■■■□□ 2.41
CSPG5-205ENST00000610462 MRPL4Q9BYD3 311 aaKnown RBP30.08■■■□□ 2.41
CSPG5-205ENST00000610462 CHORDC1Q9UHD1 332 aaPredicted RBP30.08■■■□□ 2.41
CSPG5-205ENST00000610462 TRPC6Q9Y210 931 aa30.08■■■□□ 2.41
CSPG5-205ENST00000610462 PCDHB2Q9Y5E7 798 aa30.08■■■□□ 2.41
CSPG5-205ENST00000610462 IGKV6-21A0A0C4DH24 114 aa30.08■■■□□ 2.41
CSPG5-205ENST00000610462 CLDN3O15551 220 aa30.08■■■□□ 2.41
CSPG5-205ENST00000610462 MSCO60682 206 aa30.08■■■□□ 2.41
CSPG5-205ENST00000610462 FAM153BP0C7A2 387 aa30.08■■■□□ 2.41
CSPG5-205ENST00000610462 COMTP21964 271 aa30.08■■■□□ 2.41
CSPG5-205ENST00000610462 GJA5P36382 358 aa30.08■■■□□ 2.41
CSPG5-205ENST00000610462 LAMTOR4Q0VGL1 99 aa30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms