RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 VPS52Q8N1B4 723 aa15.59■□□□□ 0.09
HDDC2-209ENST00000609477 MRPL43Q8N983 215 aaKnown RBP15.59■□□□□ 0.09
HDDC2-209ENST00000609477 STAMQ92783 540 aa15.59■□□□□ 0.09
HDDC2-209ENST00000609477 SNX27Q96L92 541 aa15.59■□□□□ 0.09
HDDC2-209ENST00000609477 ZBP1Q9H171 429 aa15.59■□□□□ 0.09
HDDC2-209ENST00000609477 TLE6Q9H808 572 aa15.59■□□□□ 0.09
HDDC2-209ENST00000609477 CITO14578 2027 aa15.59■□□□□ 0.09
HDDC2-209ENST00000609477 GOLGA6L4A6NEF3 574 aa15.58■□□□□ 0.08
HDDC2-209ENST00000609477 KIAA0391O15091 583 aaKnown RBP15.58■□□□□ 0.08
HDDC2-209ENST00000609477 EFEMP2O95967 443 aa15.58■□□□□ 0.08
HDDC2-209ENST00000609477 SOD2P04179 222 aa15.58■□□□□ 0.08
HDDC2-209ENST00000609477 ADRB2P07550 413 aa15.58■□□□□ 0.08
HDDC2-209ENST00000609477 EHHADHQ08426 723 aa15.58■□□□□ 0.08
HDDC2-209ENST00000609477 HYAL1Q12794 435 aa15.58■□□□□ 0.08
HDDC2-209ENST00000609477 ELAVL2Q12926 359 aaKnown RBP15.58■□□□□ 0.08
HDDC2-209ENST00000609477 PSMD2Q13200 908 aa15.58■□□□□ 0.08
HDDC2-209ENST00000609477 HSP90AA2PQ14568 343 aaPredicted RBP15.58■□□□□ 0.08
HDDC2-209ENST00000609477 PUS10Q3MIT2 529 aaKnown RBP15.58■□□□□ 0.08
HDDC2-209ENST00000609477 KANK3Q6NY19 840 aa15.58■□□□□ 0.08
HDDC2-209ENST00000609477 TMEM173Q86WV6 379 aaPredicted RBP15.58■□□□□ 0.08
HDDC2-209ENST00000609477 RNF168Q8IYW5 571 aaPredicted RBP15.58■□□□□ 0.08
HDDC2-209ENST00000609477 EFHBQ8N7U6 833 aa15.58■□□□□ 0.08
HDDC2-209ENST00000609477 CEP120Q8N960 986 aa15.58■□□□□ 0.08
HDDC2-209ENST00000609477 DDX27Q96GQ7 796 aaKnown RBP15.58■□□□□ 0.08
HDDC2-209ENST00000609477 MSTO1Q9BUK6 570 aa15.58■□□□□ 0.08
HDDC2-209ENST00000609477 UBE2ZQ9H832 354 aaPredicted RBP15.58■□□□□ 0.08
HDDC2-209ENST00000609477 SERTAD1Q9UHV2 236 aa15.58■□□□□ 0.08
HDDC2-209ENST00000609477 ADAM28Q9UKQ2 775 aa15.58■□□□□ 0.08
HDDC2-209ENST00000609477 TMEM189-UBE2V1I3L0A0 370 aa15.57■□□□□ 0.08
HDDC2-209ENST00000609477 FAM189A1O60320 539 aa15.57■□□□□ 0.08
HDDC2-209ENST00000609477 LDHAP00338 332 aaKnown RBP15.57■□□□□ 0.08
HDDC2-209ENST00000609477 C1RP00736 705 aa15.57■□□□□ 0.08
HDDC2-209ENST00000609477 SRGAP2BP0DMP2 458 aa15.57■□□□□ 0.08
HDDC2-209ENST00000609477 GARTP22102 1010 aa15.57■□□□□ 0.08
HDDC2-209ENST00000609477 RPL9P32969 192 aaKnown RBP15.57■□□□□ 0.08
HDDC2-209ENST00000609477 NDUFA8P51970 172 aa15.57■□□□□ 0.08
HDDC2-209ENST00000609477 OSTNP61366 133 aa15.57■□□□□ 0.08
HDDC2-209ENST00000609477 SNRPFP62306 86 aaKnown RBP15.57■□□□□ 0.08
HDDC2-209ENST00000609477 ADAM15Q13444 863 aa15.57■□□□□ 0.08
HDDC2-209ENST00000609477 DUSP6Q16828 381 aa15.57■□□□□ 0.08
HDDC2-209ENST00000609477 SLC10A6Q3KNW5 377 aa15.57■□□□□ 0.08
HDDC2-209ENST00000609477 FAM26FQ5R3K3 315 aa15.57■□□□□ 0.08
HDDC2-209ENST00000609477 SLC39A4Q6P5W5 647 aa15.57■□□□□ 0.08
HDDC2-209ENST00000609477 DCLRE1AQ6PJP8 1040 aa15.57■□□□□ 0.08
HDDC2-209ENST00000609477 TMEM184AQ6ZMB5 413 aa15.57■□□□□ 0.08
HDDC2-209ENST00000609477 SYCP3Q8IZU3 236 aa15.57■□□□□ 0.08
HDDC2-209ENST00000609477 FSIP1Q8NA03 581 aa15.57■□□□□ 0.08
HDDC2-209ENST00000609477 PAGE5Q96GU1 130 aa15.57■□□□□ 0.08
HDDC2-209ENST00000609477 CHAMP1Q96JM3 812 aa15.57■□□□□ 0.08
HDDC2-209ENST00000609477 ASB2Q96Q27 587 aa15.57■□□□□ 0.08
HDDC2-209ENST00000609477 HAPLN2Q9GZV7 340 aa15.57■□□□□ 0.08
HDDC2-209ENST00000609477 MARCH5Q9NX47 278 aa15.57■□□□□ 0.08
HDDC2-209ENST00000609477 CHMP5Q9NZZ3 219 aa15.57■□□□□ 0.08
HDDC2-209ENST00000609477 TBC1D7Q9P0N9 293 aa15.57■□□□□ 0.08
HDDC2-209ENST00000609477 PRG3Q9Y2Y8 225 aaPredicted RBP15.57■□□□□ 0.08
HDDC2-209ENST00000609477 UBE4BO95155 1302 aa15.57■□□□□ 0.08
HDDC2-209ENST00000609477 UNC80Q8N2C7 3258 aa15.56■□□□□ 0.08
HDDC2-209ENST00000609477 TTC26A0AVF1 554 aa15.56■□□□□ 0.08
HDDC2-209ENST00000609477 C2orf71A6NGG8 1288 aa15.56■□□□□ 0.08
HDDC2-209ENST00000609477 XPOTO43592 962 aaKnown RBP15.56■□□□□ 0.08
HDDC2-209ENST00000609477 TADA2AO75478 443 aa15.56■□□□□ 0.08
HDDC2-209ENST00000609477 CXCL14O95715 111 aa15.56■□□□□ 0.08
HDDC2-209ENST00000609477 HARSP12081 509 aaKnown RBP15.56■□□□□ 0.08
HDDC2-209ENST00000609477 CYP3A5P20815 502 aa15.56■□□□□ 0.08
HDDC2-209ENST00000609477 AFMP43652 599 aa15.56■□□□□ 0.08
HDDC2-209ENST00000609477 NRIP1P48552 1158 aa15.56■□□□□ 0.08
HDDC2-209ENST00000609477 PPP2R3AQ06190 1150 aa15.56■□□□□ 0.08
HDDC2-209ENST00000609477 USP41Q3LFD5 358 aa15.56■□□□□ 0.08
HDDC2-209ENST00000609477 LEXMQ3ZCV2 418 aa15.56■□□□□ 0.08
HDDC2-209ENST00000609477 TJAP1Q5JTD0 557 aa15.56■□□□□ 0.08
HDDC2-209ENST00000609477 PLPP4Q5VZY2 271 aa15.56■□□□□ 0.08
HDDC2-209ENST00000609477 PPFIBP1Q86W92 1011 aa15.56■□□□□ 0.08
HDDC2-209ENST00000609477 ZNF507Q8TCN5 953 aa15.56■□□□□ 0.08
HDDC2-209ENST00000609477 BCL7CQ8WUZ0 217 aaPredicted RBP15.56■□□□□ 0.08
HDDC2-209ENST00000609477 POMGNT1Q8WZA1 660 aa15.56■□□□□ 0.08
HDDC2-209ENST00000609477 HERC2P3Q9BVR0 1158 aa15.56■□□□□ 0.08
HDDC2-209ENST00000609477 ASB7Q9H672 318 aa15.56■□□□□ 0.08
HDDC2-209ENST00000609477 RPF1Q9H9Y2 349 aaKnown RBP15.56■□□□□ 0.08
HDDC2-209ENST00000609477 GDPD2Q9HCC8 539 aa15.56■□□□□ 0.08
HDDC2-209ENST00000609477 MRPL17Q9NRX2 175 aaKnown RBP15.56■□□□□ 0.08
HDDC2-209ENST00000609477 CHST7Q9NS84 486 aa15.56■□□□□ 0.08
HDDC2-209ENST00000609477 CGNQ9P2M7 1197 aaKnown RBP15.56■□□□□ 0.08
HDDC2-209ENST00000609477 CPSF3Q9UKF6 684 aaKnown RBP15.56■□□□□ 0.08
HDDC2-209ENST00000609477 AGO2Q9UKV8 859 aaKnown RBP15.56■□□□□ 0.08
HDDC2-209ENST00000609477 DERAQ9Y315 318 aa15.56■□□□□ 0.08
HDDC2-209ENST00000609477 SF3B1O75533 1304 aaKnown RBP eCLIP15.56■□□□□ 0.084e-6■■■■■ 208.6
HDDC2-209ENST00000609477 TRIP11Q15643 1979 aa15.56■□□□□ 0.08
HDDC2-209ENST00000609477 ANKRD63C9JTQ0 380 aa15.55■□□□□ 0.08
HDDC2-209ENST00000609477 TRAPPC3O43617 180 aa15.55■□□□□ 0.08
HDDC2-209ENST00000609477 ZNF202O95125 648 aa15.55■□□□□ 0.08
HDDC2-209ENST00000609477 URODP06132 367 aa15.55■□□□□ 0.08
HDDC2-209ENST00000609477 MYBP10242 640 aa15.55■□□□□ 0.08
HDDC2-209ENST00000609477 PAX3P23760 479 aa15.55■□□□□ 0.08
HDDC2-209ENST00000609477 CASP5P51878 434 aa15.55■□□□□ 0.08
HDDC2-209ENST00000609477 CREMQ03060 361 aa15.55■□□□□ 0.08
HDDC2-209ENST00000609477 CUL4BQ13620 913 aa15.55■□□□□ 0.08
HDDC2-209ENST00000609477 UPP1Q16831 310 aa15.55■□□□□ 0.08
HDDC2-209ENST00000609477 FUT10Q6P4F1 479 aa15.55■□□□□ 0.08
HDDC2-209ENST00000609477 PDXDC1Q6P996 788 aa15.55■□□□□ 0.08
HDDC2-209ENST00000609477 KRBA2Q6ZNG9 492 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms