RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 SMARCB1Q12824 385 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 TRIM28Q13263 835 aaKnown RBP5.02□□□□□ -1.61
HDDC2-208ENST00000609021 PLD1Q13393 1074 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 ZNF423Q2M1K9 1284 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 PEX26Q7Z412 305 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 RAVER1Q8IY67 606 aaKnown RBP5.02□□□□□ -1.61
HDDC2-208ENST00000609021 SLC38A6Q8IZM9 456 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.02□□□□□ -1.61
HDDC2-208ENST00000609021 FATE1Q969F0 183 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 CCDC138Q96M89 665 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 SECISBP2Q96T21 854 aaKnown RBP5.02□□□□□ -1.61
HDDC2-208ENST00000609021 EIF2AK1Q9BQI3 630 aaKnown RBP5.02□□□□□ -1.61
HDDC2-208ENST00000609021 FUCA2Q9BTY2 467 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 STK33Q9BYT3 514 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 TRIM45Q9H8W5 580 aaPredicted RBP5.02□□□□□ -1.61
HDDC2-208ENST00000609021 FANCEQ9HB96 536 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 SH2B1Q9NRF2 756 aaPredicted RBP5.02□□□□□ -1.61
HDDC2-208ENST00000609021 ARMC1Q9NVT9 282 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 TRIM35Q9UPQ4 493 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 PCDHB15Q9Y5E8 787 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 CASZ1Q86V15 1759 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 CCT8L1PA6NM43 557 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 LACTBL1A8MY62 500 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 PSMD11O00231 422 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 SEMA3DO95025 777 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 F13A1P00488 732 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 MTHFD1P11586 935 aaKnown RBP5.02□□□□□ -1.61
HDDC2-208ENST00000609021 ATF4P18848 351 aaPredicted RBP5.02□□□□□ -1.61
HDDC2-208ENST00000609021 MDH1P40925 334 aaKnown RBP5.02□□□□□ -1.61
HDDC2-208ENST00000609021 ATN1P54259 1190 aaPredicted RBP5.02□□□□□ -1.61
HDDC2-208ENST00000609021 RELQ04864 619 aaPredicted RBP5.02□□□□□ -1.61
HDDC2-208ENST00000609021 PTK2BQ14289 1009 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 ACAP2Q15057 778 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 B3GNT6Q6ZMB0 384 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 GPR141Q7Z602 305 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 CPXCR1Q8N123 301 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 RBBP8NLQ8NC74 664 aaPredicted RBP5.02□□□□□ -1.61
HDDC2-208ENST00000609021 HAPLN3Q96S86 360 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 GMLQ99445 158 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 DHRS9Q9BPW9 319 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 SELENOOQ9BVL4 669 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 KCTD10Q9H3F6 313 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 PARVAQ9NVD7 372 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 PRKAG2Q9UGJ0 569 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 CPSF3Q9UKF6 684 aaKnown RBP5.02□□□□□ -1.61
HDDC2-208ENST00000609021 DNAJC16Q9Y2G8 782 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 COQ6Q9Y2Z9 468 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 TBX22Q9Y458 520 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 GRIN2DO15399 1336 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 PKD1L3Q7Z443 1732 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 SLIT3O75094 1523 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 PLCH1Q4KWH8 1693 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 ARHGEF37A1IGU5 675 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 B4GALT4O60513 344 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 RNGTTO60942 597 aaKnown RBP5.01□□□□□ -1.61
HDDC2-208ENST00000609021 DCTN3O75935 186 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 OLFM2O95897 454 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 ITGB3P05106 788 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 CALB1P05937 261 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 ABCB1P08183 1280 aaPredicted RBP5.01□□□□□ -1.61
HDDC2-208ENST00000609021 SFTPCP11686 197 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 ALAS1P13196 640 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 TMEM11P17152 192 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 TCEA1P23193 301 aaKnown RBP5.01□□□□□ -1.61
HDDC2-208ENST00000609021 CRABP2P29373 138 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 ADSLP30566 484 aaPredicted RBP5.01□□□□□ -1.61
HDDC2-208ENST00000609021 PTPN9P43378 593 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 TAGLNQ01995 201 aaKnown RBP5.01□□□□□ -1.61
HDDC2-208ENST00000609021 APBA1Q02410 837 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 CDK18Q07002 472 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 FCHO2Q0JRZ9 810 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 SMAD4Q13485 552 aaKnown RBP5.01□□□□□ -1.61
HDDC2-208ENST00000609021 ADRM1Q16186 407 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 ME3Q16798 604 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 GEN1Q17RS7 908 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 TMEM63BQ5T3F8 832 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 OR52E8Q6IFG1 317 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 SWSAP1Q6NVH7 229 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 TRPM8Q7Z2W7 1104 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 ITIH5Q86UX2 942 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 JAZF1Q86VZ6 243 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 TICAM1Q8IUC6 712 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 RIBC1Q8N443 379 aaPredicted RBP5.01□□□□□ -1.61
HDDC2-208ENST00000609021 LRRC71Q8N4P6 559 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 ZNF565Q8N9K5 539 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 STON2Q8WXE9 905 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 HSPBAP1Q96EW2 488 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 INTS4Q96HW7 963 aaKnown RBP5.01□□□□□ -1.61
HDDC2-208ENST00000609021 TNIP3Q96KP6 325 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 TSGA13Q96PP4 275 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 YME1L1Q96TA2 773 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 ESYT1Q9BSJ8 1104 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 NUSAP1Q9BXS6 441 aaKnown RBP5.01□□□□□ -1.61
HDDC2-208ENST00000609021 TRIM15Q9C019 465 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 KLHL25Q9H0H3 589 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 CSRNP2Q9H175 543 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 CYP4F11Q9HBI6 524 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 SDHAF3Q9NRP4 125 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 TBC1D22BQ9NU19 505 aa5.01□□□□□ -1.61
HDDC2-208ENST00000609021 INTS9Q9NV88 658 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms