RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 OR1G1P47890 313 aa12.66□□□□□ -0.38
LINC00539-204ENST00000608957 CACNB1Q02641 598 aaPredicted RBP12.66□□□□□ -0.38
LINC00539-204ENST00000608957 NAB2Q15742 525 aa12.66□□□□□ -0.38
LINC00539-204ENST00000608957 E2F4Q16254 413 aa12.66□□□□□ -0.38
LINC00539-204ENST00000608957 KANK3Q6NY19 840 aa12.66□□□□□ -0.38
LINC00539-204ENST00000608957 CEP57L1Q8IYX8 460 aa12.66□□□□□ -0.38
LINC00539-204ENST00000608957 CEP120Q8N960 986 aa12.66□□□□□ -0.38
LINC00539-204ENST00000608957 IQUBQ8NA54 791 aa12.66□□□□□ -0.38
LINC00539-204ENST00000608957 SLC22A17Q8WUG5 538 aa12.66□□□□□ -0.38
LINC00539-204ENST00000608957 FAM193BQ96PV7 902 aaPredicted RBP12.66□□□□□ -0.38
LINC00539-204ENST00000608957 ACO2Q99798 780 aaKnown RBP12.66□□□□□ -0.38
LINC00539-204ENST00000608957 PAAF1Q9BRP4 392 aa12.66□□□□□ -0.38
LINC00539-204ENST00000608957 HERC2P3Q9BVR0 1158 aa12.66□□□□□ -0.38
LINC00539-204ENST00000608957 PANK2Q9BZ23 570 aa12.66□□□□□ -0.38
LINC00539-204ENST00000608957 C11orf16Q9NQ32 467 aa12.66□□□□□ -0.38
LINC00539-204ENST00000608957 PRKAG3Q9UGI9 489 aa12.66□□□□□ -0.38
LINC00539-204ENST00000608957 PHLPP2Q6ZVD8 1323 aa12.65□□□□□ -0.38
LINC00539-204ENST00000608957 DOCK8Q8NF50 2099 aa12.65□□□□□ -0.38
LINC00539-204ENST00000608957 TECTAO75443 2155 aa12.65□□□□□ -0.38
LINC00539-204ENST00000608957 CCDC169A6NNP5 214 aa12.65□□□□□ -0.38
LINC00539-204ENST00000608957 PI4K2BG5E9Z4 385 aa12.65□□□□□ -0.38
LINC00539-204ENST00000608957 SLC16A4O15374 487 aa12.65□□□□□ -0.38
LINC00539-204ENST00000608957 SLC26A4O43511 780 aa12.65□□□□□ -0.38
LINC00539-204ENST00000608957 SSBP05455 408 aaKnown RBP eCLIP12.65□□□□□ -0.38
LINC00539-204ENST00000608957 SLFN14P0C7P3 912 aa12.65□□□□□ -0.38
LINC00539-204ENST00000608957 CCDC192P0DO97 292 aa12.65□□□□□ -0.38
LINC00539-204ENST00000608957 EPCAMP16422 314 aa12.65□□□□□ -0.38
LINC00539-204ENST00000608957 PLCG1P19174 1290 aa12.65□□□□□ -0.38
LINC00539-204ENST00000608957 IGFBP6P24592 240 aaPredicted RBP12.65□□□□□ -0.38
LINC00539-204ENST00000608957 SSTR3P32745 418 aaPredicted RBP12.65□□□□□ -0.38
LINC00539-204ENST00000608957 CA8P35219 290 aa12.65□□□□□ -0.38
LINC00539-204ENST00000608957 EFNA5P52803 228 aa12.65□□□□□ -0.38
LINC00539-204ENST00000608957 TYRO3Q06418 890 aa12.65□□□□□ -0.38
LINC00539-204ENST00000608957 GRIK3Q13003 919 aa12.65□□□□□ -0.38
LINC00539-204ENST00000608957 POSTNQ15063 836 aa12.65□□□□□ -0.38
LINC00539-204ENST00000608957 ATF7IP2Q5U623 682 aa12.65□□□□□ -0.38
LINC00539-204ENST00000608957 RRAGBQ5VZM2 374 aa12.65□□□□□ -0.38
LINC00539-204ENST00000608957 SASS6Q6UVJ0 657 aa12.65□□□□□ -0.38
LINC00539-204ENST00000608957 GAS2L3Q86XJ1 694 aa12.65□□□□□ -0.38
LINC00539-204ENST00000608957 CALML4Q96GE6 196 aa12.65□□□□□ -0.38
LINC00539-204ENST00000608957 KLHL5Q96PQ7 755 aa12.65□□□□□ -0.38
LINC00539-204ENST00000608957 NT5C3AQ9H0P0 336 aa12.65□□□□□ -0.38
LINC00539-204ENST00000608957 TMEM134Q9H6X4 195 aa12.65□□□□□ -0.38
LINC00539-204ENST00000608957 PTPRHQ9HD43 1115 aa12.65□□□□□ -0.38
LINC00539-204ENST00000608957 FAM50BQ9Y247 325 aa12.65□□□□□ -0.38
LINC00539-204ENST00000608957 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.64□□□□□ -0.39
LINC00539-204ENST00000608957 FSD2A1L4K1 749 aa12.64□□□□□ -0.39
LINC00539-204ENST00000608957 CARNS1A5YM72 827 aa12.64□□□□□ -0.39
LINC00539-204ENST00000608957 GOLGA6L3A6NEY3 463 aa12.64□□□□□ -0.39
LINC00539-204ENST00000608957 K7ERI5 159 aa12.64□□□□□ -0.39
LINC00539-204ENST00000608957 MEFVO15553 781 aaPredicted RBP12.64□□□□□ -0.39
LINC00539-204ENST00000608957 SOD2P04179 222 aa12.64□□□□□ -0.39
LINC00539-204ENST00000608957 CNPP09543 421 aaKnown RBP12.64□□□□□ -0.39
LINC00539-204ENST00000608957 PRR29P0C7W0 189 aa12.64□□□□□ -0.39
LINC00539-204ENST00000608957 PROZP22891 400 aa12.64□□□□□ -0.39
LINC00539-204ENST00000608957 DMP1Q13316 513 aaPredicted RBP12.64□□□□□ -0.39
LINC00539-204ENST00000608957 PNOCQ13519 176 aa12.64□□□□□ -0.39
LINC00539-204ENST00000608957 MCM6Q14566 821 aa12.64□□□□□ -0.39
LINC00539-204ENST00000608957 TMEM132AQ24JP5 1023 aa12.64□□□□□ -0.39
LINC00539-204ENST00000608957 HACE1Q8IYU2 909 aa12.64□□□□□ -0.39
LINC00539-204ENST00000608957 C12orf76Q8N812 135 aaPredicted RBP12.64□□□□□ -0.39
LINC00539-204ENST00000608957 CDK5RAP3Q96JB5 506 aa12.64□□□□□ -0.39
LINC00539-204ENST00000608957 ZBTB45Q96K62 511 aaPredicted RBP12.64□□□□□ -0.39
LINC00539-204ENST00000608957 B3GALT6Q96L58 329 aa12.64□□□□□ -0.39
LINC00539-204ENST00000608957 DRC1Q96MC2 740 aa12.64□□□□□ -0.39
LINC00539-204ENST00000608957 TARS2Q9BW92 718 aaKnown RBP12.64□□□□□ -0.39
LINC00539-204ENST00000608957 GPR62Q9BZJ7 368 aa12.64□□□□□ -0.39
LINC00539-204ENST00000608957 CDT1Q9H211 546 aa12.64□□□□□ -0.39
LINC00539-204ENST00000608957 CUEDC2Q9H467 287 aa12.64□□□□□ -0.39
LINC00539-204ENST00000608957 MAGEF1Q9HAY2 307 aa12.64□□□□□ -0.39
LINC00539-204ENST00000608957 KMT5AQ9NQR1 393 aa12.64□□□□□ -0.39
LINC00539-204ENST00000608957 KIAA1468Q9P260 1216 aa12.64□□□□□ -0.39
LINC00539-204ENST00000608957 RAPGEFL1Q9UHV5 662 aa12.64□□□□□ -0.39
LINC00539-204ENST00000608957 TNFSF13BQ9Y275 285 aa12.64□□□□□ -0.39
LINC00539-204ENST00000608957 GDAQ9Y2T3 454 aa12.64□□□□□ -0.39
LINC00539-204ENST00000608957 FAM86C2PA6NEL3 165 aa12.63□□□□□ -0.39
LINC00539-204ENST00000608957 CASTOR2A6NHX0 329 aa12.63□□□□□ -0.39
LINC00539-204ENST00000608957 LOC730098B7Z3J9 87 aa12.63□□□□□ -0.39
LINC00539-204ENST00000608957 PLS3P13797 630 aa12.63□□□□□ -0.39
LINC00539-204ENST00000608957 STX1AQ16623 288 aa12.63□□□□□ -0.39
LINC00539-204ENST00000608957 DCAF4L1Q3SXM0 396 aa12.63□□□□□ -0.39
LINC00539-204ENST00000608957 KIAA0319Q5VV43 1072 aa12.63□□□□□ -0.39
LINC00539-204ENST00000608957 FUT10Q6P4F1 479 aa12.63□□□□□ -0.39
LINC00539-204ENST00000608957 GRAMD1CQ8IYS0 662 aa12.63□□□□□ -0.39
LINC00539-204ENST00000608957 KCTD17Q8N5Z5 321 aa12.63□□□□□ -0.39
LINC00539-204ENST00000608957 TMEM161BQ8NDZ6 487 aa12.63□□□□□ -0.39
LINC00539-204ENST00000608957 SPIRE2Q8WWL2 714 aa12.63□□□□□ -0.39
LINC00539-204ENST00000608957 CASP10Q92851 521 aa12.63□□□□□ -0.39
LINC00539-204ENST00000608957 ERCC4Q92889 916 aaPredicted RBP12.63□□□□□ -0.39
LINC00539-204ENST00000608957 PAGE5Q96GU1 130 aa12.63□□□□□ -0.39
LINC00539-204ENST00000608957 RPS6KC1Q96S38 1066 aa12.63□□□□□ -0.39
LINC00539-204ENST00000608957 REEP2Q9BRK0 252 aa12.63□□□□□ -0.39
LINC00539-204ENST00000608957 ADPGKQ9BRR6 497 aa12.63□□□□□ -0.39
LINC00539-204ENST00000608957 NTPCRQ9BSD7 190 aaKnown RBP12.63□□□□□ -0.39
LINC00539-204ENST00000608957 TIPINQ9BVW5 301 aa12.63□□□□□ -0.39
LINC00539-204ENST00000608957 HAPLN2Q9GZV7 340 aa12.63□□□□□ -0.39
LINC00539-204ENST00000608957 STK17AQ9UEE5 414 aa12.63□□□□□ -0.39
LINC00539-204ENST00000608957 C2CD2LO14523 706 aa12.62□□□□□ -0.39
LINC00539-204ENST00000608957 KIF4AO95239 1232 aa12.62□□□□□ -0.39
LINC00539-204ENST00000608957 WEE2P0C1S8 567 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms