RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 RASGEF1CQ8N431 466 aa13.36□□□□□ -0.27
CTCFL-218ENST00000608440 ZFP28Q8NHY6 868 aa13.36□□□□□ -0.27
CTCFL-218ENST00000608440 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.36□□□□□ -0.27
CTCFL-218ENST00000608440 FAM89AQ96GI7 184 aa13.36□□□□□ -0.27
CTCFL-218ENST00000608440 MAML3Q96JK9 1138 aa13.36□□□□□ -0.27
CTCFL-218ENST00000608440 MKNK1Q9BUB5 465 aa13.36□□□□□ -0.27
CTCFL-218ENST00000608440 POLR3CQ9BUI4 534 aaPredicted RBP13.36□□□□□ -0.27
CTCFL-218ENST00000608440 LSM14BQ9BX40 385 aaKnown RBP13.36□□□□□ -0.27
CTCFL-218ENST00000608440 GRIP2Q9C0E4 1043 aa13.36□□□□□ -0.27
CTCFL-218ENST00000608440 ARMC7Q9H6L4 198 aa13.36□□□□□ -0.27
CTCFL-218ENST00000608440 NPHS2Q9NP85 383 aa13.36□□□□□ -0.27
CTCFL-218ENST00000608440 ASIC1P78348 528 aa13.35□□□□□ -0.27
CTCFL-218ENST00000608440 LMNB2Q03252 620 aa13.35□□□□□ -0.27
CTCFL-218ENST00000608440 PDE1CQ14123 709 aaPredicted RBP13.35□□□□□ -0.27
CTCFL-218ENST00000608440 SCARF1Q14162 830 aa13.35□□□□□ -0.27
CTCFL-218ENST00000608440 RABL6Q3YEC7 729 aaPredicted RBP13.35□□□□□ -0.27
CTCFL-218ENST00000608440 NADK2Q4G0N4 442 aa13.35□□□□□ -0.27
CTCFL-218ENST00000608440 TPCN2Q8NHX9 752 aa13.35□□□□□ -0.27
CTCFL-218ENST00000608440 PYM1Q9BRP8 204 aaKnown RBP13.35□□□□□ -0.27
CTCFL-218ENST00000608440 TPK1Q9H3S4 243 aa13.35□□□□□ -0.27
CTCFL-218ENST00000608440 TRPC7Q9HCX4 862 aa13.35□□□□□ -0.27
CTCFL-218ENST00000608440 HBS1LQ9Y450 684 aaKnown RBP13.35□□□□□ -0.27
CTCFL-218ENST00000608440 BTBD19C9JJ37 291 aa13.35□□□□□ -0.27
CTCFL-218ENST00000608440 CRABP2P29373 138 aa13.35□□□□□ -0.27
CTCFL-218ENST00000608440 ZAP70P43403 619 aa13.35□□□□□ -0.27
CTCFL-218ENST00000608440 CPA2P48052 419 aa13.35□□□□□ -0.27
CTCFL-218ENST00000608440 WDR4P57081 412 aaKnown RBP13.35□□□□□ -0.27
CTCFL-218ENST00000608440 FOXO4P98177 505 aa13.35□□□□□ -0.27
CTCFL-218ENST00000608440 LPIN1Q14693 890 aa13.35□□□□□ -0.27
CTCFL-218ENST00000608440 LRRC24Q50LG9 513 aa13.35□□□□□ -0.27
CTCFL-218ENST00000608440 AADACL2Q6P093 401 aa13.35□□□□□ -0.27
CTCFL-218ENST00000608440 Q6ZNX1 250 aa13.35□□□□□ -0.27
CTCFL-218ENST00000608440 SMIM5Q71RC9 77 aa13.35□□□□□ -0.27
CTCFL-218ENST00000608440 SYNE4Q8N205 404 aa13.35□□□□□ -0.27
CTCFL-218ENST00000608440 SLC25A41Q8N5S1 370 aa13.35□□□□□ -0.27
CTCFL-218ENST00000608440 CFAP61Q8NHU2 1237 aa13.35□□□□□ -0.27
CTCFL-218ENST00000608440 C10orf82Q8WW14 230 aa13.35□□□□□ -0.27
CTCFL-218ENST00000608440 CCDC127Q96BQ5 260 aa13.35□□□□□ -0.27
CTCFL-218ENST00000608440 ZNF594Q96JF6 807 aaPredicted RBP13.35□□□□□ -0.27
CTCFL-218ENST00000608440 PRICKLE1Q96MT3 831 aaPredicted RBP13.35□□□□□ -0.27
CTCFL-218ENST00000608440 KLHL4Q9C0H6 718 aa13.35□□□□□ -0.27
CTCFL-218ENST00000608440 TMEM60Q9H2L4 133 aa13.35□□□□□ -0.27
CTCFL-218ENST00000608440 PSTPIP2Q9H939 334 aa13.35□□□□□ -0.27
CTCFL-218ENST00000608440 NDUFA13Q9P0J0 144 aa13.35□□□□□ -0.27
CTCFL-218ENST00000608440 PTPN22Q9Y2R2 807 aa13.35□□□□□ -0.27
CTCFL-218ENST00000608440 IVNS1ABPQ9Y6Y0 642 aa13.35□□□□□ -0.27
CTCFL-218ENST00000608440 E9PBE3 544 aa13.34□□□□□ -0.27
CTCFL-218ENST00000608440 WDR46O15213 610 aaKnown RBP13.34□□□□□ -0.27
CTCFL-218ENST00000608440 ONECUT3O60422 494 aaPredicted RBP13.34□□□□□ -0.27
CTCFL-218ENST00000608440 GAS8O95995 478 aa13.34□□□□□ -0.27
CTCFL-218ENST00000608440 PRKCIP41743 596 aa13.34□□□□□ -0.27
CTCFL-218ENST00000608440 DLG1Q12959 904 aa13.34□□□□□ -0.27
CTCFL-218ENST00000608440 CAMK2BQ13554 666 aa13.34□□□□□ -0.27
CTCFL-218ENST00000608440 C16orf72Q14CZ0 275 aa13.34□□□□□ -0.27
CTCFL-218ENST00000608440 BBS5Q8N3I7 341 aa13.34□□□□□ -0.27
CTCFL-218ENST00000608440 SREK1Q8WXA9 508 aaKnown RBP13.34□□□□□ -0.27
CTCFL-218ENST00000608440 CCDC85AQ96PX6 553 aaPredicted RBP13.34□□□□□ -0.27
CTCFL-218ENST00000608440 CDC42EP4Q9H3Q1 356 aaKnown RBP13.34□□□□□ -0.27
CTCFL-218ENST00000608440 ATAD3AQ9NVI7 634 aa13.34□□□□□ -0.27
CTCFL-218ENST00000608440 N6AMT1Q9Y5N5 214 aa13.34□□□□□ -0.27
CTCFL-218ENST00000608440 BTAF1O14981 1849 aa13.34□□□□□ -0.27
CTCFL-218ENST00000608440 A0A1W2PRG0 241 aa13.34□□□□□ -0.27
CTCFL-218ENST00000608440 HOXA10P31260 410 aaPredicted RBP13.34□□□□□ -0.27
CTCFL-218ENST00000608440 LIFRP42702 1097 aa13.34□□□□□ -0.27
CTCFL-218ENST00000608440 CTC1Q2NKJ3 1217 aa13.34□□□□□ -0.27
CTCFL-218ENST00000608440 PAOXQ6QHF9 649 aa13.34□□□□□ -0.27
CTCFL-218ENST00000608440 ANO5Q75V66 913 aa13.34□□□□□ -0.27
CTCFL-218ENST00000608440 NLRP10Q86W26 655 aa13.34□□□□□ -0.27
CTCFL-218ENST00000608440 ARHGAP24Q8N264 748 aa13.34□□□□□ -0.27
CTCFL-218ENST00000608440 METTL25Q8N6Q8 603 aa13.34□□□□□ -0.27
CTCFL-218ENST00000608440 ZNF713Q8N859 430 aaPredicted RBP13.34□□□□□ -0.27
CTCFL-218ENST00000608440 OR6Y1Q8NGX8 325 aa13.34□□□□□ -0.27
CTCFL-218ENST00000608440 PRR11Q96HE9 360 aaPredicted RBP13.34□□□□□ -0.27
CTCFL-218ENST00000608440 NUP85Q9BW27 656 aa13.34□□□□□ -0.27
CTCFL-218ENST00000608440 SAP30BPQ9UHR5 308 aaKnown RBP13.34□□□□□ -0.27
CTCFL-218ENST00000608440 PPM1HQ9ULR3 514 aa13.34□□□□□ -0.27
CTCFL-218ENST00000608440 V9GY48 417 aaPredicted RBP13.34□□□□□ -0.27
CTCFL-218ENST00000608440 NHSQ6T4R5 1651 aa13.34□□□□□ -0.27
CTCFL-218ENST00000608440 MYH14Q7Z406 1995 aaKnown RBP13.34□□□□□ -0.27
CTCFL-218ENST00000608440 A0A1W2PQ67 120 aa13.33□□□□□ -0.27
CTCFL-218ENST00000608440 ANKRD63C9JTQ0 380 aa13.33□□□□□ -0.27
CTCFL-218ENST00000608440 NOL4O94818 638 aa13.33□□□□□ -0.27
CTCFL-218ENST00000608440 CLPTM1O96005 669 aa13.33□□□□□ -0.27
CTCFL-218ENST00000608440 RARGP13631 454 aa13.33□□□□□ -0.27
CTCFL-218ENST00000608440 ATP5DP30049 168 aa13.33□□□□□ -0.27
CTCFL-218ENST00000608440 PGM1P36871 562 aa13.33□□□□□ -0.27
CTCFL-218ENST00000608440 STT3AP46977 705 aa13.33□□□□□ -0.27
CTCFL-218ENST00000608440 MAPK7Q13164 816 aa13.33□□□□□ -0.27
CTCFL-218ENST00000608440 RRP1BQ14684 758 aaKnown RBP13.33□□□□□ -0.27
CTCFL-218ENST00000608440 WTAPQ15007 396 aa13.33□□□□□ -0.27
CTCFL-218ENST00000608440 BCL2A1Q16548 175 aa13.33□□□□□ -0.27
CTCFL-218ENST00000608440 SFT2D3Q587I9 215 aa13.33□□□□□ -0.27
CTCFL-218ENST00000608440 LPCAT4Q643R3 524 aa13.33□□□□□ -0.27
CTCFL-218ENST00000608440 TMTC3Q6ZXV5 915 aa13.33□□□□□ -0.27
CTCFL-218ENST00000608440 ATG9AQ7Z3C6 839 aa13.33□□□□□ -0.27
CTCFL-218ENST00000608440 LRRC15Q8TF66 581 aa13.33□□□□□ -0.27
CTCFL-218ENST00000608440 PHF20Q9BVI0 1012 aa13.33□□□□□ -0.27
CTCFL-218ENST00000608440 ROPN1BQ9BZX4 212 aaPredicted RBP13.33□□□□□ -0.27
CTCFL-218ENST00000608440 LIN28AQ9H9Z2 209 aaKnown RBP13.33□□□□□ -0.27
CTCFL-218ENST00000608440 ROPN1Q9HAT0 212 aaPredicted RBP13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms