RNA–Protein interactions for RNA: ENST00000607559.1

TPM2-208, Transcript of tropomyosin 2, human

TSL 2

Gene TPM2, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM2-208	ENST00000607559	HIP1R	O75146	1068 aa		11.79	□□□□□ -0.52
TPM2-208	ENST00000607559	TH	P07101	528 aa		11.79	□□□□□ -0.52
TPM2-208	ENST00000607559	MTHFR	P42898	656 aa		11.79	□□□□□ -0.52
TPM2-208	ENST00000607559	OR1G1	P47890	313 aa		11.79	□□□□□ -0.52
TPM2-208	ENST00000607559	USP41	Q3LFD5	358 aa		11.79	□□□□□ -0.52
TPM2-208	ENST00000607559	ARSH	Q5FYA8	562 aa		11.79	□□□□□ -0.52
TPM2-208	ENST00000607559	ATF7IP2	Q5U623	682 aa		11.79	□□□□□ -0.52
TPM2-208	ENST00000607559	EEF1DP3	Q658K8	133 aa		11.79	□□□□□ -0.52
TPM2-208	ENST00000607559	KIAA1841	Q6NSI8	718 aa		11.79	□□□□□ -0.52
TPM2-208	ENST00000607559	CES5A	Q6NT32	575 aa		11.79	□□□□□ -0.52
TPM2-208	ENST00000607559	C15orf39	Q6ZRI6	1047 aa		11.79	□□□□□ -0.52
TPM2-208	ENST00000607559	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	11.79	□□□□□ -0.52
TPM2-208	ENST00000607559	GPR149	Q86SP6	731 aa		11.79	□□□□□ -0.52
TPM2-208	ENST00000607559	TMEM161B	Q8NDZ6	487 aa		11.79	□□□□□ -0.52
TPM2-208	ENST00000607559	AUTS2	Q8WXX7	1259 aa		11.79	□□□□□ -0.52
TPM2-208	ENST00000607559	RIPOR3	Q96MK2	946 aa		11.79	□□□□□ -0.52
TPM2-208	ENST00000607559	PPP1R10	Q96QC0	940 aa	Known RBP	11.79	□□□□□ -0.52
TPM2-208	ENST00000607559	GPR62	Q9BZJ7	368 aa		11.79	□□□□□ -0.52
TPM2-208	ENST00000607559	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	11.79	□□□□□ -0.52
TPM2-208	ENST00000607559	SNTG2	Q9NY99	539 aa		11.79	□□□□□ -0.52
TPM2-208	ENST00000607559	DPP7	Q9UHL4	492 aa		11.79	□□□□□ -0.52
TPM2-208	ENST00000607559	VWA3A	A6NCI4	1184 aa		11.78	□□□□□ -0.52
TPM2-208	ENST00000607559	RECQL4	O94761	1208 aa		11.78	□□□□□ -0.52
TPM2-208	ENST00000607559	PLS3	P13797	630 aa		11.78	□□□□□ -0.52
TPM2-208	ENST00000607559	EPCAM	P16422	314 aa		11.78	□□□□□ -0.52
TPM2-208	ENST00000607559	GRM5	P41594	1212 aa		11.78	□□□□□ -0.52
TPM2-208	ENST00000607559	ZNF131	P52739	623 aa		11.78	□□□□□ -0.52
TPM2-208	ENST00000607559	PEX3	P56589	373 aa		11.78	□□□□□ -0.52
TPM2-208	ENST00000607559	DMP1	Q13316	513 aa	Predicted RBP	11.78	□□□□□ -0.52
TPM2-208	ENST00000607559	PTPA	Q15257	358 aa		11.78	□□□□□ -0.52
TPM2-208	ENST00000607559	ATAT1	Q5SQI0	421 aa		11.78	□□□□□ -0.52
TPM2-208	ENST00000607559	LLGL2	Q6P1M3	1020 aa		11.78	□□□□□ -0.52
TPM2-208	ENST00000607559	FUT10	Q6P4F1	479 aa		11.78	□□□□□ -0.52
TPM2-208	ENST00000607559	ZPBP2	Q6X784	338 aa		11.78	□□□□□ -0.52
TPM2-208	ENST00000607559	HFE2	Q6ZVN8	426 aa		11.78	□□□□□ -0.52
TPM2-208	ENST00000607559	ZDHHC14	Q8IZN3	488 aa		11.78	□□□□□ -0.52
TPM2-208	ENST00000607559	FBXL18	Q96ME1	805 aa		11.78	□□□□□ -0.52
TPM2-208	ENST00000607559	MRPL4	Q9BYD3	311 aa	Known RBP	11.78	□□□□□ -0.52
TPM2-208	ENST00000607559	CCSER1	Q9C0I3	900 aa		11.78	□□□□□ -0.52
TPM2-208	ENST00000607559	PLEKHA4	Q9H4M7	779 aa		11.78	□□□□□ -0.52
TPM2-208	ENST00000607559	POLD4	Q9HCU8	107 aa		11.78	□□□□□ -0.52
TPM2-208	ENST00000607559	PARP2	Q9UGN5	583 aa		11.78	□□□□□ -0.52
TPM2-208	ENST00000607559	ODF2L	Q9ULJ1	636 aa		11.78	□□□□□ -0.52
TPM2-208	ENST00000607559	NR2E1	Q9Y466	385 aa		11.78	□□□□□ -0.52
TPM2-208	ENST00000607559		F8W810	466 aa		11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	TEX28	O15482	410 aa		11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	UROD	P06132	367 aa		11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	ADH1A	P07327	375 aa		11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	PLA2G4B	P0C869	781 aa		11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	MAPT	P10636	758 aa	Known RBP	11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	MCF2	P10911	925 aa		11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	KCNE1	P15382	129 aa		11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	SYT1	P21579	422 aa		11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	KLRC2	P26717	231 aa		11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	UBA7	P41226	1012 aa		11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	GLUD2	P49448	558 aa		11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	SMTN	P53814	917 aa		11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	ZXDA	P98168	799 aa		11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	CREM	Q03060	361 aa		11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	ELAVL2	Q12926	359 aa	Known RBP	11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	HSP90AA2P	Q14568	343 aa	Predicted RBP	11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	DCLRE1A	Q6PJP8	1040 aa		11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	TRIM67	Q6ZTA4	783 aa		11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	RTL10	Q7L3V2	364 aa		11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	CABP7	Q86V35	215 aa		11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	ZNF687	Q8N1G0	1237 aa		11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	PIK3R5	Q8WYR1	880 aa		11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	SNX21	Q969T3	373 aa		11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	UROC1	Q96N76	676 aa		11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	PAAF1	Q9BRP4	392 aa		11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	KIFC3	Q9BVG8	833 aa		11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	APOL6	Q9BWW8	343 aa		11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	CXCL16	Q9H2A7	254 aa		11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	POMK	Q9H5K3	350 aa		11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	SFXN1	Q9H9B4	322 aa		11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	KMT5A	Q9NQR1	393 aa		11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	BLOC1S4	Q9NUP1	217 aa		11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	KLK14	Q9P0G3	267 aa		11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	LARS	Q9P2J5	1176 aa	Known RBP	11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	USP20	Q9Y2K6	914 aa		11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	PRG3	Q9Y2Y8	225 aa	Predicted RBP	11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	PTPRZ1	P23471	2315 aa	Predicted RBP	11.77	□□□□□ -0.53
TPM2-208	ENST00000607559	RIF1	Q5UIP0	2472 aa	Known RBP	11.76	□□□□□ -0.53
TPM2-208	ENST00000607559	SMIM28	A0A1B0GU29	152 aa		11.76	□□□□□ -0.53
TPM2-208	ENST00000607559	CCDC169	A6NNP5	214 aa		11.76	□□□□□ -0.53
TPM2-208	ENST00000607559	SFI1	A8K8P3	1242 aa		11.76	□□□□□ -0.53
TPM2-208	ENST00000607559		H0YCG3	227 aa		11.76	□□□□□ -0.53
TPM2-208	ENST00000607559	TADA2A	O75478	443 aa		11.76	□□□□□ -0.53
TPM2-208	ENST00000607559	TOM1L1	O75674	476 aa		11.76	□□□□□ -0.53
TPM2-208	ENST00000607559	PIGR	P01833	764 aa		11.76	□□□□□ -0.53
TPM2-208	ENST00000607559	ADRB2	P07550	413 aa		11.76	□□□□□ -0.53
TPM2-208	ENST00000607559	PDIA4	P13667	645 aa	Known RBP	11.76	□□□□□ -0.53
TPM2-208	ENST00000607559	DDIT3	P35638	169 aa		11.76	□□□□□ -0.53
TPM2-208	ENST00000607559	NCKAP1L	P55160	1127 aa		11.76	□□□□□ -0.53
TPM2-208	ENST00000607559	SF3A1	Q15459	793 aa	Known RBP	11.76	□□□□□ -0.53
TPM2-208	ENST00000607559	PDXDC1	Q6P996	788 aa		11.76	□□□□□ -0.53
TPM2-208	ENST00000607559	MPZL3	Q6UWV2	235 aa		11.76	□□□□□ -0.53
TPM2-208	ENST00000607559	CD300LG	Q6UXG3	332 aa		11.76	□□□□□ -0.53
TPM2-208	ENST00000607559	TMEM87A	Q8NBN3	555 aa		11.76	□□□□□ -0.53
TPM2-208	ENST00000607559	LRRC15	Q8TF66	581 aa		11.76	□□□□□ -0.53

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