RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.5□□□□□ -0.57
LINC01001-203ENST00000607448 PP2D1A8MPX8 630 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 KLRC4O43908 158 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 TUBBP07437 444 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 BMP1P13497 986 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 CCT6AP40227 531 aaKnown RBP11.5□□□□□ -0.57
LINC01001-203ENST00000607448 PHKA2P46019 1235 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 UBXN1Q04323 297 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 CAPSQ13938 189 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 MTF1Q14872 753 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 PTPROQ16827 1216 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 TSR1Q2NL82 804 aaKnown RBP11.5□□□□□ -0.57
LINC01001-203ENST00000607448 MAEAQ7L5Y9 396 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 CATSPER4Q7RTX7 472 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 SRGAP1Q7Z6B7 1085 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 SPPL3Q8TCT6 385 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 P2RX5Q93086 422 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 C7orf25Q9BPX7 421 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 PLVAPQ9BX97 442 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 UBE2ZQ9H832 354 aaPredicted RBP11.5□□□□□ -0.57
LINC01001-203ENST00000607448 ANKEF1Q9NU02 776 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 PPME1Q9Y570 386 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 CTAGE9A4FU28 777 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 DGAT1O75907 488 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 PNMA6AP0CW24 399 aaPredicted RBP11.5□□□□□ -0.57
LINC01001-203ENST00000607448 GLRA2P23416 452 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 CCNE1P24864 410 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 CDC25AP30304 524 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 HOXA11P31270 313 aaPredicted RBP11.5□□□□□ -0.57
LINC01001-203ENST00000607448 KRT9P35527 623 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 FXR2P51116 673 aaKnown RBP eCLIP11.5□□□□□ -0.57
LINC01001-203ENST00000607448 CDC42EP1Q00587 391 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 BRD3Q15059 726 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 WHAMMP3Q1A5X7 153 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 TIGD5Q53EQ6 642 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 SPOUT1Q5T280 376 aaKnown RBP11.5□□□□□ -0.57
LINC01001-203ENST00000607448 TWF2Q6IBS0 349 aaKnown RBP11.5□□□□□ -0.57
LINC01001-203ENST00000607448 ZNF662Q6ZS27 426 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 ADGRD2Q7Z7M1 963 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 COLGALT1Q8NBJ5 622 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 OR8K1Q8NGG5 319 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 ADAMTS19Q8TE59 1207 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 POF1BQ8WVV4 589 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 POLR3CQ9BUI4 534 aaPredicted RBP11.5□□□□□ -0.57
LINC01001-203ENST00000607448 TMEM117Q9H0C3 514 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 NSUN3Q9H649 340 aaKnown RBP11.5□□□□□ -0.57
LINC01001-203ENST00000607448 POLD4Q9HCU8 107 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 TUFT1Q9NNX1 390 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 CHST12Q9NRB3 414 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 AGPAT5Q9NUQ2 364 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 COG5Q9UP83 839 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 GDAQ9Y2T3 454 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 FHOD1Q9Y613 1164 aa11.5□□□□□ -0.57
LINC01001-203ENST00000607448 TTC28Q96AY4 2481 aa11.49□□□□□ -0.57
LINC01001-203ENST00000607448 H3BQ06 376 aaPredicted RBP11.49□□□□□ -0.57
LINC01001-203ENST00000607448 GAS2O43903 313 aaKnown RBP11.49□□□□□ -0.57
LINC01001-203ENST00000607448 KCNA5P22460 613 aa11.49□□□□□ -0.57
LINC01001-203ENST00000607448 RPA1P27694 616 aa11.49□□□□□ -0.57
LINC01001-203ENST00000607448 ARL2P36404 184 aa11.49□□□□□ -0.57
LINC01001-203ENST00000607448 AFF1P51825 1210 aaKnown RBP11.49□□□□□ -0.57
LINC01001-203ENST00000607448 MBTD1Q05BQ5 628 aa11.49□□□□□ -0.57
LINC01001-203ENST00000607448 HYAL1Q12794 435 aa11.49□□□□□ -0.57
LINC01001-203ENST00000607448 ZNF569Q5MCW4 686 aa11.49□□□□□ -0.57
LINC01001-203ENST00000607448 TEX35Q5T0J7 233 aa11.49□□□□□ -0.57
LINC01001-203ENST00000607448 UBXN11Q5T124 520 aa11.49□□□□□ -0.57
LINC01001-203ENST00000607448 IRF2BP1Q8IU81 584 aa11.49□□□□□ -0.57
LINC01001-203ENST00000607448 EXOC8Q8IYI6 725 aa11.49□□□□□ -0.57
LINC01001-203ENST00000607448 ZNF507Q8TCN5 953 aa11.49□□□□□ -0.57
LINC01001-203ENST00000607448 TCP11Q8WWU5 503 aa11.49□□□□□ -0.57
LINC01001-203ENST00000607448 CALML4Q96GE6 196 aa11.49□□□□□ -0.57
LINC01001-203ENST00000607448 CPB2Q96IY4 423 aa11.49□□□□□ -0.57
LINC01001-203ENST00000607448 DNAJC7Q99615 494 aa11.49□□□□□ -0.57
LINC01001-203ENST00000607448 NAPGQ99747 312 aaPredicted RBP11.49□□□□□ -0.57
LINC01001-203ENST00000607448 TRAIPQ9BWF2 469 aa11.49□□□□□ -0.57
LINC01001-203ENST00000607448 INO80BQ9C086 356 aaPredicted RBP11.49□□□□□ -0.57
LINC01001-203ENST00000607448 LRRC27Q9C0I9 530 aa11.49□□□□□ -0.57
LINC01001-203ENST00000607448 POLR3FQ9H1D9 316 aaPredicted RBP11.49□□□□□ -0.57
LINC01001-203ENST00000607448 LZTFL1Q9NQ48 299 aa11.49□□□□□ -0.57
LINC01001-203ENST00000607448 FAM105AQ9NUU6 356 aa11.49□□□□□ -0.57
LINC01001-203ENST00000607448 EXOC1Q9NV70 894 aa11.49□□□□□ -0.57
LINC01001-203ENST00000607448 STK17AQ9UEE5 414 aa11.49□□□□□ -0.57
LINC01001-203ENST00000607448 CAPN11Q9UMQ6 739 aa11.49□□□□□ -0.57
LINC01001-203ENST00000607448 LUC7L2Q9Y383 392 aaKnown RBP11.49□□□□□ -0.57
LINC01001-203ENST00000607448 TRIP11Q15643 1979 aa11.49□□□□□ -0.57
LINC01001-203ENST00000607448 BDP1A6H8Y1 2624 aa11.49□□□□□ -0.57
LINC01001-203ENST00000607448 LINC01565O15544 149 aa11.48□□□□□ -0.57
LINC01001-203ENST00000607448 B4GALT5O43286 388 aa11.48□□□□□ -0.57
LINC01001-203ENST00000607448 B4GALT3O60512 393 aa11.48□□□□□ -0.57
LINC01001-203ENST00000607448 TSPAN1O60635 241 aa11.48□□□□□ -0.57
LINC01001-203ENST00000607448 FGF18O76093 207 aa11.48□□□□□ -0.57
LINC01001-203ENST00000607448 EOMESO95936 686 aa11.48□□□□□ -0.57
LINC01001-203ENST00000607448 LTBRP36941 435 aa11.48□□□□□ -0.57
LINC01001-203ENST00000607448 PTENP60484 403 aa11.48□□□□□ -0.57
LINC01001-203ENST00000607448 ERVFC1P60507 584 aa11.48□□□□□ -0.57
LINC01001-203ENST00000607448 DLX2Q07687 328 aaPredicted RBP11.48□□□□□ -0.57
LINC01001-203ENST00000607448 COL19A1Q14993 1142 aa11.48□□□□□ -0.57
LINC01001-203ENST00000607448 AMHR2Q16671 573 aa11.48□□□□□ -0.57
LINC01001-203ENST00000607448 TTI2Q6NXR4 508 aa11.48□□□□□ -0.57
LINC01001-203ENST00000607448 CNNM4Q6P4Q7 775 aa11.48□□□□□ -0.57
LINC01001-203ENST00000607448 FOXR2Q6PJQ5 311 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms