RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 KRT79Q5XKE5 535 aa8.38□□□□□ -1.07
CUX1-219ENST00000606749 MCTP1Q6DN14 999 aa8.38□□□□□ -1.07
CUX1-219ENST00000606749 ASTLQ6HA08 431 aaPredicted RBP8.38□□□□□ -1.07
CUX1-219ENST00000606749 RINT1Q6NUQ1 792 aa8.38□□□□□ -1.07
CUX1-219ENST00000606749 DCLRE1AQ6PJP8 1040 aa8.38□□□□□ -1.07
CUX1-219ENST00000606749 CD300LGQ6UXG3 332 aa8.38□□□□□ -1.07
CUX1-219ENST00000606749 ALKAL1Q6UXT8 129 aa8.38□□□□□ -1.07
CUX1-219ENST00000606749 C1orf186Q6ZWK4 172 aa8.38□□□□□ -1.07
CUX1-219ENST00000606749 TAS1R3Q7RTX0 852 aa8.38□□□□□ -1.07
CUX1-219ENST00000606749 KCNK18Q7Z418 384 aa8.38□□□□□ -1.07
CUX1-219ENST00000606749 DAW1Q8N136 415 aa8.38□□□□□ -1.07
CUX1-219ENST00000606749 SLC44A3Q8N4M1 653 aa8.38□□□□□ -1.07
CUX1-219ENST00000606749 TMEM105Q8N8V8 129 aa8.38□□□□□ -1.07
CUX1-219ENST00000606749 RSAD2Q8WXG1 361 aa8.38□□□□□ -1.07
CUX1-219ENST00000606749 PIK3R5Q8WYR1 880 aa8.38□□□□□ -1.07
CUX1-219ENST00000606749 STAMQ92783 540 aa8.38□□□□□ -1.07
CUX1-219ENST00000606749 PPP1R10Q96QC0 940 aaKnown RBP8.38□□□□□ -1.07
CUX1-219ENST00000606749 MYADMQ96S97 322 aa8.38□□□□□ -1.07
CUX1-219ENST00000606749 ACO2Q99798 780 aaKnown RBP8.38□□□□□ -1.07
CUX1-219ENST00000606749 NTPCRQ9BSD7 190 aaKnown RBP8.38□□□□□ -1.07
CUX1-219ENST00000606749 RUSC1Q9BVN2 902 aa8.38□□□□□ -1.07
CUX1-219ENST00000606749 IRF2BPLQ9H1B7 796 aa8.38□□□□□ -1.07
CUX1-219ENST00000606749 TMEM134Q9H6X4 195 aa8.38□□□□□ -1.07
CUX1-219ENST00000606749 PIDD1Q9HB75 910 aa8.38□□□□□ -1.07
CUX1-219ENST00000606749 PTPRHQ9HD43 1115 aa8.38□□□□□ -1.07
CUX1-219ENST00000606749 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.38□□□□□ -1.07
CUX1-219ENST00000606749 EPS15L1Q9UBC2 864 aa8.38□□□□□ -1.07
CUX1-219ENST00000606749 DUSP12Q9UNI6 340 aa8.38□□□□□ -1.07
CUX1-219ENST00000606749 RBM19Q9Y4C8 960 aaKnown RBP8.38□□□□□ -1.07
CUX1-219ENST00000606749 PLXNA3P51805 1871 aa8.38□□□□□ -1.07
CUX1-219ENST00000606749 C2orf16Q68DN1 1984 aa8.37□□□□□ -1.07
CUX1-219ENST00000606749 MTCL1Q9Y4B5 1905 aaKnown RBP8.37□□□□□ -1.07
CUX1-219ENST00000606749 KMT2EQ8IZD2 1858 aa8.37□□□□□ -1.07
CUX1-219ENST00000606749 SMIM28A0A1B0GU29 152 aa8.37□□□□□ -1.07
CUX1-219ENST00000606749 H0Y858 1186 aa8.37□□□□□ -1.07
CUX1-219ENST00000606749 TMEM189-UBE2V1I3L0A0 370 aa8.37□□□□□ -1.07
CUX1-219ENST00000606749 ADAM12O43184 909 aa8.37□□□□□ -1.07
CUX1-219ENST00000606749 PI15O43692 258 aa8.37□□□□□ -1.07
CUX1-219ENST00000606749 ST18O60284 1047 aa8.37□□□□□ -1.07
CUX1-219ENST00000606749 B3GAT3O94766 335 aa8.37□□□□□ -1.07
CUX1-219ENST00000606749 CENPBP07199 599 aaPredicted RBP8.37□□□□□ -1.07
CUX1-219ENST00000606749 LAMP2P13473 410 aa8.37□□□□□ -1.07
CUX1-219ENST00000606749 NPR3P17342 541 aa8.37□□□□□ -1.07
CUX1-219ENST00000606749 GRM5P41594 1212 aa8.37□□□□□ -1.07
CUX1-219ENST00000606749 CLCNKBP51801 687 aa8.37□□□□□ -1.07
CUX1-219ENST00000606749 ATP2C1P98194 919 aaPredicted RBP8.37□□□□□ -1.07
CUX1-219ENST00000606749 MAPK7Q13164 816 aa8.37□□□□□ -1.07
CUX1-219ENST00000606749 DMP1Q13316 513 aaPredicted RBP8.37□□□□□ -1.07
CUX1-219ENST00000606749 PSMD5Q16401 504 aa8.37□□□□□ -1.07
CUX1-219ENST00000606749 UPP1Q16831 310 aa8.37□□□□□ -1.07
CUX1-219ENST00000606749 RILPL1Q5EBL4 403 aa8.37□□□□□ -1.07
CUX1-219ENST00000606749 XKR4Q5GH76 650 aa8.37□□□□□ -1.07
CUX1-219ENST00000606749 GLRA4Q5JXX5 417 aa8.37□□□□□ -1.07
CUX1-219ENST00000606749 HYIQ5T013 277 aa8.37□□□□□ -1.07
CUX1-219ENST00000606749 PDXDC1Q6P996 788 aa8.37□□□□□ -1.07
CUX1-219ENST00000606749 APBB1IPQ7Z5R6 666 aaPredicted RBP8.37□□□□□ -1.07
CUX1-219ENST00000606749 ATOH1Q92858 354 aaPredicted RBP8.37□□□□□ -1.07
CUX1-219ENST00000606749 NXPE3Q969Y0 559 aa8.37□□□□□ -1.07
CUX1-219ENST00000606749 TMX3Q96JJ7 454 aa8.37□□□□□ -1.07
CUX1-219ENST00000606749 DRC1Q96MC2 740 aa8.37□□□□□ -1.07
CUX1-219ENST00000606749 TARS2Q9BW92 718 aaKnown RBP8.37□□□□□ -1.07
CUX1-219ENST00000606749 MFSD1Q9H3U5 465 aa8.37□□□□□ -1.07
CUX1-219ENST00000606749 C17orf75Q9HAS0 396 aa8.37□□□□□ -1.07
CUX1-219ENST00000606749 KMT5AQ9NQR1 393 aa8.37□□□□□ -1.07
CUX1-219ENST00000606749 ARHGAP28Q9P2N2 729 aa8.37□□□□□ -1.07
CUX1-219ENST00000606749 FBXW11Q9UKB1 542 aa8.37□□□□□ -1.07
CUX1-219ENST00000606749 KIF3AQ9Y496 699 aa8.37□□□□□ -1.07
CUX1-219ENST00000606749 DENND4AQ7Z401 1863 aa8.36□□□□□ -1.07
CUX1-219ENST00000606749 ANHXE9PGG2 379 aa8.36□□□□□ -1.07
CUX1-219ENST00000606749 ABLIM1O14639 778 aa8.36□□□□□ -1.07
CUX1-219ENST00000606749 SLC16A4O15374 487 aa8.36□□□□□ -1.07
CUX1-219ENST00000606749 NARSO43776 548 aaKnown RBP8.36□□□□□ -1.07
CUX1-219ENST00000606749 CD2BP2O95400 341 aaKnown RBP8.36□□□□□ -1.07
CUX1-219ENST00000606749 HNRNPA1P09651 372 aaKnown RBP eCLIP8.36□□□□□ -1.07
CUX1-219ENST00000606749 FGFR3P22607 806 aa8.36□□□□□ -1.07
CUX1-219ENST00000606749 PROZP22891 400 aa8.36□□□□□ -1.07
CUX1-219ENST00000606749 GUCY2CP25092 1073 aa8.36□□□□□ -1.07
CUX1-219ENST00000606749 GJB2P29033 226 aa8.36□□□□□ -1.07
CUX1-219ENST00000606749 OR1D2P34982 312 aa8.36□□□□□ -1.07
CUX1-219ENST00000606749 YARSP54577 528 aaKnown RBP8.36□□□□□ -1.07
CUX1-219ENST00000606749 SLC12A3P55017 1021 aa8.36□□□□□ -1.07
CUX1-219ENST00000606749 OSTNP61366 133 aa8.36□□□□□ -1.07
CUX1-219ENST00000606749 CACNB1Q02641 598 aaPredicted RBP8.36□□□□□ -1.07
CUX1-219ENST00000606749 SOX4Q06945 474 aaPredicted RBP8.36□□□□□ -1.07
CUX1-219ENST00000606749 RAB33AQ14088 237 aa8.36□□□□□ -1.07
CUX1-219ENST00000606749 ZRSR1Q15695 479 aaKnown RBP8.36□□□□□ -1.07
CUX1-219ENST00000606749 UVSSAQ2YD98 709 aa8.36□□□□□ -1.07
CUX1-219ENST00000606749 PPM1LQ5SGD2 360 aa8.36□□□□□ -1.07
CUX1-219ENST00000606749 CWF19L1Q69YN2 538 aaKnown RBP8.36□□□□□ -1.07
CUX1-219ENST00000606749 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.36□□□□□ -1.07
CUX1-219ENST00000606749 GRASPQ7Z6J2 395 aaPredicted RBP8.36□□□□□ -1.07
CUX1-219ENST00000606749 SIX5Q8N196 739 aa8.36□□□□□ -1.07
CUX1-219ENST00000606749 KCTD17Q8N5Z5 321 aa8.36□□□□□ -1.07
CUX1-219ENST00000606749 CEP120Q8N960 986 aa8.36□□□□□ -1.07
CUX1-219ENST00000606749 SYT2Q8N9I0 419 aaPredicted RBP8.36□□□□□ -1.07
CUX1-219ENST00000606749 FLCNQ8NFG4 579 aa8.36□□□□□ -1.07
CUX1-219ENST00000606749 DDX27Q96GQ7 796 aaKnown RBP8.36□□□□□ -1.07
CUX1-219ENST00000606749 ZBTB45Q96K62 511 aaPredicted RBP8.36□□□□□ -1.07
CUX1-219ENST00000606749 UROC1Q96N76 676 aa8.36□□□□□ -1.07
CUX1-219ENST00000606749 ZMAT2Q96NC0 199 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms