RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 TOPORSQ9NS56 1045 aaPredicted RBP15.77■□□□□ 0.12
TUBE1-208ENST00000604743 PDCD11Q14690 1871 aaKnown RBP15.77■□□□□ 0.11
TUBE1-208ENST00000604743 MBTPS2O43462 519 aa15.76■□□□□ 0.11
TUBE1-208ENST00000604743 URODP06132 367 aa15.76■□□□□ 0.11
TUBE1-208ENST00000604743 SRGAP2BP0DMP2 458 aa15.76■□□□□ 0.11
TUBE1-208ENST00000604743 KIAA1841Q6NSI8 718 aa15.76■□□□□ 0.11
TUBE1-208ENST00000604743 FUT10Q6P4F1 479 aa15.76■□□□□ 0.11
TUBE1-208ENST00000604743 DNAJC19Q96DA6 116 aa15.76■□□□□ 0.11
TUBE1-208ENST00000604743 MSLNLQ96KJ4 702 aa15.76■□□□□ 0.11
TUBE1-208ENST00000604743 FIZ1Q96SL8 496 aa15.76■□□□□ 0.11
TUBE1-208ENST00000604743 HERC2P3Q9BVR0 1158 aa15.76■□□□□ 0.11
TUBE1-208ENST00000604743 GPR62Q9BZJ7 368 aa15.76■□□□□ 0.11
TUBE1-208ENST00000604743 HAPLN2Q9GZV7 340 aa15.76■□□□□ 0.11
TUBE1-208ENST00000604743 MRPL44Q9H9J2 332 aaKnown RBP15.76■□□□□ 0.11
TUBE1-208ENST00000604743 GOLGA2P5Q9HBQ8 144 aa15.76■□□□□ 0.11
TUBE1-208ENST00000604743 MRPL17Q9NRX2 175 aaKnown RBP15.76■□□□□ 0.11
TUBE1-208ENST00000604743 STK39Q9UEW8 545 aa15.76■□□□□ 0.11
TUBE1-208ENST00000604743 ADAM28Q9UKQ2 775 aa15.76■□□□□ 0.11
TUBE1-208ENST00000604743 FAM50BQ9Y247 325 aa15.76■□□□□ 0.11
TUBE1-208ENST00000604743 HCFC2Q9Y5Z7 792 aa15.76■□□□□ 0.11
TUBE1-208ENST00000604743 C5orf42Q9H799 3197 aa15.76■□□□□ 0.11
TUBE1-208ENST00000604743 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.75■□□□□ 0.11
TUBE1-208ENST00000604743 SMIM28A0A1B0GU29 152 aa15.75■□□□□ 0.11
TUBE1-208ENST00000604743 FSD2A1L4K1 749 aa15.75■□□□□ 0.11
TUBE1-208ENST00000604743 TNFRSF10AO00220 468 aa15.75■□□□□ 0.11
TUBE1-208ENST00000604743 KIF4AO95239 1232 aa15.75■□□□□ 0.11
TUBE1-208ENST00000604743 KLRC2P26717 231 aa15.75■□□□□ 0.11
TUBE1-208ENST00000604743 GLUD2P49448 558 aa15.75■□□□□ 0.11
TUBE1-208ENST00000604743 GTF2BQ00403 316 aa15.75■□□□□ 0.11
TUBE1-208ENST00000604743 MCL1Q07820 350 aa15.75■□□□□ 0.11
TUBE1-208ENST00000604743 SMAD4Q13485 552 aaKnown RBP15.75■□□□□ 0.11
TUBE1-208ENST00000604743 NAB2Q15742 525 aa15.75■□□□□ 0.11
TUBE1-208ENST00000604743 HERC4Q5GLZ8 1057 aaPredicted RBP15.75■□□□□ 0.11
TUBE1-208ENST00000604743 SNX27Q96L92 541 aa15.75■□□□□ 0.11
TUBE1-208ENST00000604743 PPP1R10Q96QC0 940 aaKnown RBP15.75■□□□□ 0.11
TUBE1-208ENST00000604743 EMILIN2Q9BXX0 1053 aa15.75■□□□□ 0.11
TUBE1-208ENST00000604743 PANK4Q9NVE7 773 aa15.75■□□□□ 0.11
TUBE1-208ENST00000604743 FAM13BQ9NYF5 915 aa15.75■□□□□ 0.11
TUBE1-208ENST00000604743 RCOR1Q9UKL0 485 aa15.75■□□□□ 0.11
TUBE1-208ENST00000604743 IRAK3Q9Y616 596 aa15.75■□□□□ 0.11
TUBE1-208ENST00000604743 PLXNA3P51805 1871 aa15.74■□□□□ 0.11
TUBE1-208ENST00000604743 POLR2DO15514 142 aaKnown RBP15.74■□□□□ 0.11
TUBE1-208ENST00000604743 CNPP09543 421 aaKnown RBP15.74■□□□□ 0.11
TUBE1-208ENST00000604743 CXCL8P10145 99 aa15.74■□□□□ 0.11
TUBE1-208ENST00000604743 EPCAMP16422 314 aa15.74■□□□□ 0.11
TUBE1-208ENST00000604743 GAP43P17677 238 aa15.74■□□□□ 0.11
TUBE1-208ENST00000604743 SSTR3P32745 418 aaPredicted RBP15.74■□□□□ 0.11
TUBE1-208ENST00000604743 TNFSF9P41273 254 aa15.74■□□□□ 0.11
TUBE1-208ENST00000604743 CLCNKBP51801 687 aa15.74■□□□□ 0.11
TUBE1-208ENST00000604743 KRT85P78386 507 aa15.74■□□□□ 0.11
TUBE1-208ENST00000604743 COASYQ13057 564 aa15.74■□□□□ 0.11
TUBE1-208ENST00000604743 KCNC3Q14003 757 aa15.74■□□□□ 0.11
TUBE1-208ENST00000604743 E2F4Q16254 413 aa15.74■□□□□ 0.11
TUBE1-208ENST00000604743 ANKRD54Q6NXT1 300 aa15.74■□□□□ 0.11
TUBE1-208ENST00000604743 ALKAL1Q6UXT8 129 aa15.74■□□□□ 0.11
TUBE1-208ENST00000604743 ZNF720Q7Z2F6 126 aa15.74■□□□□ 0.11
TUBE1-208ENST00000604743 CEP57Q86XR8 500 aa15.74■□□□□ 0.11
TUBE1-208ENST00000604743 IQUBQ8NA54 791 aa15.74■□□□□ 0.11
TUBE1-208ENST00000604743 CASP10Q92851 521 aa15.74■□□□□ 0.11
TUBE1-208ENST00000604743 SPATA32Q96LK8 384 aa15.74■□□□□ 0.11
TUBE1-208ENST00000604743 ZMAT2Q96NC0 199 aaKnown RBP15.74■□□□□ 0.11
TUBE1-208ENST00000604743 KLHL5Q96PQ7 755 aa15.74■□□□□ 0.11
TUBE1-208ENST00000604743 MSTO1Q9BUK6 570 aa15.74■□□□□ 0.11
TUBE1-208ENST00000604743 IKZF4Q9H2S9 585 aa15.74■□□□□ 0.11
TUBE1-208ENST00000604743 VWA8A3KMH1 1905 aa15.74■□□□□ 0.11
TUBE1-208ENST00000604743 SPDYE4A6NLX3 237 aa15.73■□□□□ 0.11
TUBE1-208ENST00000604743 TISP43B9A030 160 aa15.73■□□□□ 0.11
TUBE1-208ENST00000604743 ANKRD63C9JTQ0 380 aa15.73■□□□□ 0.11
TUBE1-208ENST00000604743 TULP1O00294 542 aaPredicted RBP15.73■□□□□ 0.11
TUBE1-208ENST00000604743 MEFVO15553 781 aaPredicted RBP15.73■□□□□ 0.11
TUBE1-208ENST00000604743 GCNT3O95395 438 aa15.73■□□□□ 0.11
TUBE1-208ENST00000604743 PIGRP01833 764 aa15.73■□□□□ 0.11
TUBE1-208ENST00000604743 MYBP10242 640 aa15.73■□□□□ 0.11
TUBE1-208ENST00000604743 SCP2P22307 547 aa15.73■□□□□ 0.11
TUBE1-208ENST00000604743 IGFBP6P24592 240 aaPredicted RBP15.73■□□□□ 0.11
TUBE1-208ENST00000604743 SOX4Q06945 474 aaPredicted RBP15.73■□□□□ 0.11
TUBE1-208ENST00000604743 SPAG1Q07617 926 aa15.73■□□□□ 0.11
TUBE1-208ENST00000604743 SLC10A6Q3KNW5 377 aa15.73■□□□□ 0.11
TUBE1-208ENST00000604743 USP41Q3LFD5 358 aa15.73■□□□□ 0.11
TUBE1-208ENST00000604743 ZBTB41Q5SVQ8 909 aa15.73■□□□□ 0.11
TUBE1-208ENST00000604743 KIAA0319Q5VV43 1072 aa15.73■□□□□ 0.11
TUBE1-208ENST00000604743 RESP18Q5W5W9 173 aa15.73■□□□□ 0.11
TUBE1-208ENST00000604743 SLC39A4Q6P5W5 647 aa15.73■□□□□ 0.11
TUBE1-208ENST00000604743 SYCE2Q6PIF2 218 aa15.73■□□□□ 0.11
TUBE1-208ENST00000604743 TMEM184AQ6ZMB5 413 aa15.73■□□□□ 0.11
TUBE1-208ENST00000604743 MAP4K3Q8IVH8 894 aa15.73■□□□□ 0.11
TUBE1-208ENST00000604743 GLYCTKQ8IVS8 523 aa15.73■□□□□ 0.11
TUBE1-208ENST00000604743 CCDC65Q8IXS2 484 aa15.73■□□□□ 0.11
TUBE1-208ENST00000604743 RNF168Q8IYW5 571 aaPredicted RBP15.73■□□□□ 0.11
TUBE1-208ENST00000604743 SMRP1Q8NCR6 262 aa15.73■□□□□ 0.11
TUBE1-208ENST00000604743 RIN2Q8WYP3 895 aaPredicted RBP15.73■□□□□ 0.11
TUBE1-208ENST00000604743 FAM212AQ96EL1 285 aa15.73■□□□□ 0.11
TUBE1-208ENST00000604743 LRRC27Q9C0I9 530 aa15.73■□□□□ 0.11
TUBE1-208ENST00000604743 TNMDQ9H2S6 317 aa15.73■□□□□ 0.11
TUBE1-208ENST00000604743 CUEDC2Q9H467 287 aa15.73■□□□□ 0.11
TUBE1-208ENST00000604743 SEL1LQ9UBV2 794 aa15.73■□□□□ 0.11
TUBE1-208ENST00000604743 SSX2IPQ9Y2D8 614 aa15.73■□□□□ 0.11
TUBE1-208ENST00000604743 USP15Q9Y4E8 981 aaPredicted RBP15.73■□□□□ 0.11
TUBE1-208ENST00000604743 BDP1A6H8Y1 2624 aa15.73■□□□□ 0.11
TUBE1-208ENST00000604743 SF3B1O75533 1304 aaKnown RBP eCLIP15.72■□□□□ 0.117e-6■■■■■ 70.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms