RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 MCCD1P59942 119 aaPredicted RBP18.79■□□□□ 0.6
PPFIA3-207ENST00000602716 PSMD6Q15008 389 aa18.79■□□□□ 0.6
PPFIA3-207ENST00000602716 ARHGAP29Q52LW3 1261 aa18.79■□□□□ 0.6
PPFIA3-207ENST00000602716 GJB7Q6PEY0 223 aa18.79■□□□□ 0.6
PPFIA3-207ENST00000602716 FAM228AQ86W67 206 aa18.79■□□□□ 0.6
PPFIA3-207ENST00000602716 BRSK2Q8IWQ3 736 aa18.79■□□□□ 0.6
PPFIA3-207ENST00000602716 SLC43A3Q8NBI5 491 aa18.79■□□□□ 0.6
PPFIA3-207ENST00000602716 ARRDC4Q8NCT1 418 aa18.79■□□□□ 0.6
PPFIA3-207ENST00000602716 SENP6Q9GZR1 1112 aaPredicted RBP18.79■□□□□ 0.6
PPFIA3-207ENST00000602716 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.79■□□□□ 0.6
PPFIA3-207ENST00000602716 CPSF3Q9UKF6 684 aaKnown RBP18.79■□□□□ 0.6
PPFIA3-207ENST00000602716 NOC2LQ9Y3T9 749 aaKnown RBP18.79■□□□□ 0.6
PPFIA3-207ENST00000602716 THPOP40225 353 aa18.79■□□□□ 0.6
PPFIA3-207ENST00000602716 CRYBB1P53674 252 aaPredicted RBP18.79■□□□□ 0.6
PPFIA3-207ENST00000602716 ENOX2Q16206 610 aaKnown RBP18.79■□□□□ 0.6
PPFIA3-207ENST00000602716 EXOC3L4Q17RC7 722 aa18.79■□□□□ 0.6
PPFIA3-207ENST00000602716 TMC2Q8TDI7 906 aa18.79■□□□□ 0.6
PPFIA3-207ENST00000602716 ZNF516Q92618 1163 aa18.79■□□□□ 0.6
PPFIA3-207ENST00000602716 ZNF333Q96JL9 665 aa18.79■□□□□ 0.6
PPFIA3-207ENST00000602716 PANX2Q96RD6 677 aa18.79■□□□□ 0.6
PPFIA3-207ENST00000602716 EIF2AQ9BY44 585 aaKnown RBP18.79■□□□□ 0.6
PPFIA3-207ENST00000602716 OGDHLQ9ULD0 1010 aa18.79■□□□□ 0.6
PPFIA3-207ENST00000602716 TRPV2Q9Y5S1 764 aa18.79■□□□□ 0.6
PPFIA3-207ENST00000602716 A0A1B0GUA9 196 aa18.78■□□□□ 0.6
PPFIA3-207ENST00000602716 DNM1LO00429 736 aa18.78■□□□□ 0.6
PPFIA3-207ENST00000602716 KIAA0391O15091 583 aaKnown RBP18.78■□□□□ 0.6
PPFIA3-207ENST00000602716 CXCL8P10145 99 aa18.78■□□□□ 0.6
PPFIA3-207ENST00000602716 MNX1P50219 401 aaPredicted RBP18.78■□□□□ 0.6
PPFIA3-207ENST00000602716 MXI1P50539 228 aa18.78■□□□□ 0.6
PPFIA3-207ENST00000602716 CLCN6P51797 869 aa18.78■□□□□ 0.6
PPFIA3-207ENST00000602716 NME8Q8N427 588 aa18.78■□□□□ 0.6
PPFIA3-207ENST00000602716 MNS1Q8NEH6 495 aa18.78■□□□□ 0.6
PPFIA3-207ENST00000602716 WDR24Q96S15 920 aa18.78■□□□□ 0.6
PPFIA3-207ENST00000602716 KIAA1586Q9HCI6 787 aa18.78■□□□□ 0.6
PPFIA3-207ENST00000602716 KRT9P35527 623 aa18.78■□□□□ 0.6
PPFIA3-207ENST00000602716 TRIM14Q14142 442 aa18.78■□□□□ 0.6
PPFIA3-207ENST00000602716 FBXO46Q6PJ61 603 aaPredicted RBP18.78■□□□□ 0.6
PPFIA3-207ENST00000602716 OR5B17Q8NGF7 314 aa18.78■□□□□ 0.6
PPFIA3-207ENST00000602716 LMO3Q8TAP4 145 aa18.78■□□□□ 0.6
PPFIA3-207ENST00000602716 BAP1Q92560 729 aa18.78■□□□□ 0.6
PPFIA3-207ENST00000602716 UBXN4Q92575 508 aa18.78■□□□□ 0.6
PPFIA3-207ENST00000602716 SEMA4DQ92854 862 aa18.78■□□□□ 0.6
PPFIA3-207ENST00000602716 INTS2Q9H0H0 1204 aaKnown RBP18.78■□□□□ 0.6
PPFIA3-207ENST00000602716 CXCL16Q9H2A7 254 aa18.78■□□□□ 0.6
PPFIA3-207ENST00000602716 NLRC4Q9NPP4 1024 aa18.78■□□□□ 0.6
PPFIA3-207ENST00000602716 ABHD10Q9NUJ1 306 aa18.78■□□□□ 0.6
PPFIA3-207ENST00000602716 CAPN11Q9UMQ6 739 aa18.78■□□□□ 0.6
PPFIA3-207ENST00000602716 FHOD1Q9Y613 1164 aa18.78■□□□□ 0.6
PPFIA3-207ENST00000602716 A0A0U1RQG5 324 aaPredicted RBP18.77■□□□□ 0.6
PPFIA3-207ENST00000602716 EFCAB8A8MWE9 144 aa18.77■□□□□ 0.6
PPFIA3-207ENST00000602716 NPTXRO95502 500 aa18.77■□□□□ 0.6
PPFIA3-207ENST00000602716 CASQ1P31415 396 aa18.77■□□□□ 0.6
PPFIA3-207ENST00000602716 GNG11P61952 73 aa18.77■□□□□ 0.6
PPFIA3-207ENST00000602716 CDC42EP1Q00587 391 aa18.77■□□□□ 0.6
PPFIA3-207ENST00000602716 EPC2Q52LR7 807 aa18.77■□□□□ 0.6
PPFIA3-207ENST00000602716 GBP6Q6ZN66 633 aa18.77■□□□□ 0.6
PPFIA3-207ENST00000602716 TAS1R2Q8TE23 839 aa18.77■□□□□ 0.6
PPFIA3-207ENST00000602716 FAM212AQ96EL1 285 aa18.77■□□□□ 0.6
PPFIA3-207ENST00000602716 CARD6Q9BX69 1037 aa18.77■□□□□ 0.6
PPFIA3-207ENST00000602716 PIN4Q9Y237 131 aaKnown RBP18.77■□□□□ 0.6
PPFIA3-207ENST00000602716 NOD1Q9Y239 953 aa18.77■□□□□ 0.6
PPFIA3-207ENST00000602716 LDHAP00338 332 aaKnown RBP18.76■□□□□ 0.59
PPFIA3-207ENST00000602716 MCF2P10911 925 aa18.76■□□□□ 0.59
PPFIA3-207ENST00000602716 POLR2FP61218 127 aaKnown RBP18.76■□□□□ 0.59
PPFIA3-207ENST00000602716 PTK7Q13308 1070 aa18.76■□□□□ 0.59
PPFIA3-207ENST00000602716 FIGNQ5HY92 759 aa18.76■□□□□ 0.59
PPFIA3-207ENST00000602716 SV2AQ7L0J3 742 aa18.76■□□□□ 0.59
PPFIA3-207ENST00000602716 EFCAB13Q8IY85 973 aa18.76■□□□□ 0.59
PPFIA3-207ENST00000602716 NEK11Q8NG66 645 aa18.76■□□□□ 0.59
PPFIA3-207ENST00000602716 AGO3Q9H9G7 860 aaKnown RBP18.76■□□□□ 0.59
PPFIA3-207ENST00000602716 HES2Q9Y543 173 aa18.76■□□□□ 0.59
PPFIA3-207ENST00000602716 GTPBP10A4D1E9 387 aaKnown RBP18.76■□□□□ 0.59
PPFIA3-207ENST00000602716 ARVCFO00192 962 aa18.76■□□□□ 0.59
PPFIA3-207ENST00000602716 STAG3L1P0CL83 205 aa18.76■□□□□ 0.59
PPFIA3-207ENST00000602716 PTPN11Q06124 597 aaPredicted RBP18.76■□□□□ 0.59
PPFIA3-207ENST00000602716 KLHDC7AQ5VTJ3 777 aa18.76■□□□□ 0.59
PPFIA3-207ENST00000602716 TDRD10Q5VZ19 366 aaKnown RBP18.76■□□□□ 0.59
PPFIA3-207ENST00000602716 RPAINQ86UA6 219 aa18.76■□□□□ 0.59
PPFIA3-207ENST00000602716 DIS3LQ8TF46 1054 aaKnown RBP18.76■□□□□ 0.59
PPFIA3-207ENST00000602716 CGRRF1Q99675 332 aa18.76■□□□□ 0.59
PPFIA3-207ENST00000602716 DESI2Q9BSY9 194 aa18.76■□□□□ 0.59
PPFIA3-207ENST00000602716 PNMA6AP0CW24 399 aaPredicted RBP18.75■□□□□ 0.59
PPFIA3-207ENST00000602716 CLDN10P78369 228 aa18.75■□□□□ 0.59
PPFIA3-207ENST00000602716 BMS1Q14692 1282 aaKnown RBP18.75■□□□□ 0.59
PPFIA3-207ENST00000602716 UBXN11Q5T124 520 aa18.75■□□□□ 0.59
PPFIA3-207ENST00000602716 ZNF618Q5T7W0 954 aa18.75■□□□□ 0.59
PPFIA3-207ENST00000602716 TRAF7Q6Q0C0 670 aa18.75■□□□□ 0.59
PPFIA3-207ENST00000602716 C15orf39Q6ZRI6 1047 aa18.75■□□□□ 0.59
PPFIA3-207ENST00000602716 RSPH3Q86UC2 560 aa18.75■□□□□ 0.59
PPFIA3-207ENST00000602716 CNGA4Q8IV77 575 aa18.75■□□□□ 0.59
PPFIA3-207ENST00000602716 U2AF1L4Q8WU68 220 aaKnown RBP18.75■□□□□ 0.59
PPFIA3-207ENST00000602716 FNBP1Q96RU3 617 aa18.75■□□□□ 0.59
PPFIA3-207ENST00000602716 NAA15Q9BXJ9 866 aaKnown RBP18.75■□□□□ 0.59
PPFIA3-207ENST00000602716 NXF3Q9H4D5 531 aaKnown RBP18.75■□□□□ 0.59
PPFIA3-207ENST00000602716 TMEM8AQ9HCN3 771 aa18.75■□□□□ 0.59
PPFIA3-207ENST00000602716 LUC7L2Q9Y383 392 aaKnown RBP18.75■□□□□ 0.59
PPFIA3-207ENST00000602716 LRRC53A6NM62 1247 aa18.74■□□□□ 0.59
PPFIA3-207ENST00000602716 M0QZ92 97 aa18.74■□□□□ 0.59
PPFIA3-207ENST00000602716 GHRP10912 638 aa18.74■□□□□ 0.59
PPFIA3-207ENST00000602716 TNNI1P19237 187 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms