RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 REXO5Q96IC2 774 aaKnown RBP9.4□□□□□ -0.9
COMMD3-215ENST00000602574 DNAJC1Q96KC8 554 aaKnown RBP9.4□□□□□ -0.9
COMMD3-215ENST00000602574 ZFRQ96KR1 1074 aaKnown RBP9.4□□□□□ -0.9
COMMD3-215ENST00000602574 CCDC138Q96M89 665 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 VPS35Q96QK1 796 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 SPC25Q9HBM1 224 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 ZDHHC7Q9NXF8 308 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 CLIC5Q9NZA1 410 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 RWDD3Q9Y3V2 267 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 SPEF1Q9Y4P9 236 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 IVNS1ABPQ9Y6Y0 642 aa9.4□□□□□ -0.9
COMMD3-215ENST00000602574 KIDINS220Q9ULH0 1771 aa9.4□□□□□ -0.91
COMMD3-215ENST00000602574 PXDNLA1KZ92 1463 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 OR6C65A6NJZ3 312 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 BET1O15155 118 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 SCO2O43819 266 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 ZMYND10O75800 440 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 ECDO95905 644 aaPredicted RBP9.39□□□□□ -0.91
COMMD3-215ENST00000602574 TFRCP02786 760 aaKnown RBP9.39□□□□□ -0.91
COMMD3-215ENST00000602574 ALOX5P09917 674 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 MTHFD1P11586 935 aaKnown RBP9.39□□□□□ -0.91
COMMD3-215ENST00000602574 ATP1A3P13637 1013 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 HPDP32754 393 aaPredicted RBP9.39□□□□□ -0.91
COMMD3-215ENST00000602574 GNG2P59768 71 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 GOLGA8FQ08AF8 430 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 GOLGA8DPQ0D2H9 430 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 FAM26DQ5JW98 314 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 TTBK2Q6IQ55 1244 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 SLC4A10Q6U841 1118 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 PEX26Q7Z412 305 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 NME9Q86XW9 330 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 CNGA4Q8IV77 575 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 NLRP7Q8WX94 980 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 BORCS5Q969J3 196 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 TTC17Q96AE7 1141 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 CFAP57Q96MR6 1250 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 C8orf37Q96NL8 207 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 CDRT15Q96T59 188 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 DDX23Q9BUQ8 820 aaKnown RBP9.39□□□□□ -0.91
COMMD3-215ENST00000602574 C19orf44Q9H6X5 657 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 GPHNQ9NQX3 736 aaPredicted RBP9.39□□□□□ -0.91
COMMD3-215ENST00000602574 STX18Q9P2W9 335 aaKnown RBP9.39□□□□□ -0.91
COMMD3-215ENST00000602574 MBD2Q9UBB5 411 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 DNAJB4Q9UDY4 337 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 ANAPC5Q9UJX4 755 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 NEDD4P46934 1319 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 SALL3Q9BXA9 1300 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 CD163L1Q9NR16 1453 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 RSPH10B2B2RC85 870 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 TK2O00142 265 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 NCAM2O15394 837 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 TLR3O15455 904 aaKnown RBP9.39□□□□□ -0.91
COMMD3-215ENST00000602574 TRMUO75648 421 aaKnown RBP9.39□□□□□ -0.91
COMMD3-215ENST00000602574 HLA-DRAP01903 254 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 AFPP02771 609 aaKnown RBP9.39□□□□□ -0.91
COMMD3-215ENST00000602574 GSTM1P09488 218 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 RSPH10BP0C881 870 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 RARBP10826 455 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 KRT20P35900 424 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 PHKA2P46019 1235 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 IFNAR2P48551 515 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 TMPRSS15P98073 1019 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 CUL1Q13616 776 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 ACVR2BQ13705 512 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 GIT2Q14161 759 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 MTF1Q14872 753 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 CCDC6Q16204 474 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 MTERF2Q49AM1 385 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 SLX4IPQ5VYV7 408 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 ANO1Q5XXA6 986 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 SLFN13Q68D06 897 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 RNF43Q68DV7 783 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 MIER3Q7Z3K6 550 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 TERB1Q8NA31 727 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 MRPS27Q92552 414 aaKnown RBP9.39□□□□□ -0.91
COMMD3-215ENST00000602574 SH3KBP1Q96B97 665 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 TLCD1Q96CP7 247 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 MARCH7Q9H992 704 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 KIF17Q9P2E2 1029 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 SLC7A8Q9UHI5 535 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 TMEM5Q9Y2B1 443 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 ARL2BPQ9Y2Y0 163 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 UTP11Q9Y3A2 253 aaKnown RBP9.39□□□□□ -0.91
COMMD3-215ENST00000602574 RABGAP1Q9Y3P9 1069 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 PREX1Q8TCU6 1659 aa9.39□□□□□ -0.91
COMMD3-215ENST00000602574 H0YGN5 161 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 INO80B-WBP1J3KQ70 363 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 ELL2O00472 640 aaPredicted RBP9.38□□□□□ -0.91
COMMD3-215ENST00000602574 KLHL41O60662 606 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 JRKO75564 520 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 P4HA1P13674 534 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 ATF6P18850 670 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 PTGS2P35354 604 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 LONP1P36776 959 aaKnown RBP9.38□□□□□ -0.91
COMMD3-215ENST00000602574 PDE1AP54750 535 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 SSTP61278 116 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 ST3GAL1Q11201 340 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 STK4Q13043 487 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 SEMA3AQ14563 771 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 CLVS2Q5SYC1 327 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms