RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 CNNM4Q6P4Q7 775 aa18.29■□□□□ 0.52
SSBP4-213ENST00000602088 SLC39A4Q6P5W5 647 aa18.29■□□□□ 0.52
SSBP4-213ENST00000602088 EP400NLQ6ZTU2 488 aa18.29■□□□□ 0.52
SSBP4-213ENST00000602088 PAAF1Q9BRP4 392 aa18.29■□□□□ 0.52
SSBP4-213ENST00000602088 PYM1Q9BRP8 204 aaKnown RBP18.29■□□□□ 0.52
SSBP4-213ENST00000602088 MAGEF1Q9HAY2 307 aa18.29■□□□□ 0.52
SSBP4-213ENST00000602088 TBC1D7Q9P0N9 293 aa18.29■□□□□ 0.52
SSBP4-213ENST00000602088 H3BQ06 376 aaPredicted RBP18.28■□□□□ 0.52
SSBP4-213ENST00000602088 MEFVO15553 781 aaPredicted RBP18.28■□□□□ 0.52
SSBP4-213ENST00000602088 MATR3P43243 847 aaKnown RBP eCLIP18.28■□□□□ 0.52
SSBP4-213ENST00000602088 DLX2Q07687 328 aaPredicted RBP18.28■□□□□ 0.52
SSBP4-213ENST00000602088 SEZ6Q53EL9 994 aa18.28■□□□□ 0.52
SSBP4-213ENST00000602088 GLRA4Q5JXX5 417 aa18.28■□□□□ 0.52
SSBP4-213ENST00000602088 TAS1R1Q7RTX1 841 aa18.28■□□□□ 0.52
SSBP4-213ENST00000602088 CCDC65Q8IXS2 484 aa18.28■□□□□ 0.52
SSBP4-213ENST00000602088 RNF168Q8IYW5 571 aaPredicted RBP18.28■□□□□ 0.52
SSBP4-213ENST00000602088 AUTS2Q8WXX7 1259 aa18.28■□□□□ 0.52
SSBP4-213ENST00000602088 RABGGTAQ92696 567 aa18.28■□□□□ 0.52
SSBP4-213ENST00000602088 SNX27Q96L92 541 aa18.28■□□□□ 0.52
SSBP4-213ENST00000602088 C7orf25Q9BPX7 421 aa18.28■□□□□ 0.52
SSBP4-213ENST00000602088 CACNG4Q9UBN1 327 aa18.28■□□□□ 0.52
SSBP4-213ENST00000602088 ADAM28Q9UKQ2 775 aa18.28■□□□□ 0.52
SSBP4-213ENST00000602088 HPSEQ9Y251 543 aa18.28■□□□□ 0.52
SSBP4-213ENST00000602088 CUL9Q8IWT3 2517 aa18.28■□□□□ 0.52
SSBP4-213ENST00000602088 TTC28Q96AY4 2481 aa18.27■□□□□ 0.52
SSBP4-213ENST00000602088 CITO14578 2027 aa18.27■□□□□ 0.52
SSBP4-213ENST00000602088 A0A0B4J269 797 aa18.27■□□□□ 0.52
SSBP4-213ENST00000602088 A0A1B0GVL5 298 aa18.27■□□□□ 0.52
SSBP4-213ENST00000602088 FSD2A1L4K1 749 aa18.27■□□□□ 0.52
SSBP4-213ENST00000602088 CASTOR2A6NHX0 329 aa18.27■□□□□ 0.52
SSBP4-213ENST00000602088 ANKRD63C9JTQ0 380 aa18.27■□□□□ 0.52
SSBP4-213ENST00000602088 OGTO15294 1046 aa18.27■□□□□ 0.52
SSBP4-213ENST00000602088 GLP2RO95838 553 aa18.27■□□□□ 0.52
SSBP4-213ENST00000602088 SOD2P04179 222 aa18.27■□□□□ 0.52
SSBP4-213ENST00000602088 CLTAP09496 248 aa18.27■□□□□ 0.52
SSBP4-213ENST00000602088 KCNE1P15382 129 aa18.27■□□□□ 0.52
SSBP4-213ENST00000602088 KCNC3Q14003 757 aa18.27■□□□□ 0.52
SSBP4-213ENST00000602088 HSP90AA2PQ14568 343 aaPredicted RBP18.27■□□□□ 0.52
SSBP4-213ENST00000602088 SLC10A6Q3KNW5 377 aa18.27■□□□□ 0.52
SSBP4-213ENST00000602088 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.27■□□□□ 0.52
SSBP4-213ENST00000602088 ZMAT2Q96NC0 199 aaKnown RBP18.27■□□□□ 0.52
SSBP4-213ENST00000602088 CNTN3Q9P232 1028 aa18.27■□□□□ 0.52
SSBP4-213ENST00000602088 PCDHB13Q9Y5F0 798 aa18.27■□□□□ 0.52
SSBP4-213ENST00000602088 STYXL1Q9Y6J8 313 aa18.27■□□□□ 0.52
SSBP4-213ENST00000602088 FAM237AA0A1B0GTK4 181 aa18.26■□□□□ 0.51
SSBP4-213ENST00000602088 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.26■□□□□ 0.51
SSBP4-213ENST00000602088 FAM189A1O60320 539 aa18.26■□□□□ 0.51
SSBP4-213ENST00000602088 LILRB3O75022 631 aa18.26■□□□□ 0.51
SSBP4-213ENST00000602088 TBX10O75333 385 aa18.26■□□□□ 0.51
SSBP4-213ENST00000602088 TADA2AO75478 443 aa18.26■□□□□ 0.51
SSBP4-213ENST00000602088 GCNT3O95395 438 aa18.26■□□□□ 0.51
SSBP4-213ENST00000602088 SLFN14P0C7P3 912 aa18.26■□□□□ 0.51
SSBP4-213ENST00000602088 PFKFB1P16118 471 aa18.26■□□□□ 0.51
SSBP4-213ENST00000602088 CA8P35219 290 aa18.26■□□□□ 0.51
SSBP4-213ENST00000602088 CASP5P51878 434 aa18.26■□□□□ 0.51
SSBP4-213ENST00000602088 ASIC1P78348 528 aa18.26■□□□□ 0.51
SSBP4-213ENST00000602088 RBM10P98175 930 aaKnown RBP18.26■□□□□ 0.51
SSBP4-213ENST00000602088 KCNA1Q09470 495 aa18.26■□□□□ 0.51
SSBP4-213ENST00000602088 COASYQ13057 564 aa18.26■□□□□ 0.51
SSBP4-213ENST00000602088 ALCAMQ13740 583 aa18.26■□□□□ 0.51
SSBP4-213ENST00000602088 PTPN14Q15678 1187 aa18.26■□□□□ 0.51
SSBP4-213ENST00000602088 KYAT1Q16773 422 aa18.26■□□□□ 0.51
SSBP4-213ENST00000602088 L1TD1Q5T7N2 865 aaKnown RBP18.26■□□□□ 0.51
SSBP4-213ENST00000602088 TMEM184AQ6ZMB5 413 aa18.26■□□□□ 0.51
SSBP4-213ENST00000602088 VN1R2Q8NFZ6 395 aa18.26■□□□□ 0.51
SSBP4-213ENST00000602088 MSLNLQ96KJ4 702 aa18.26■□□□□ 0.51
SSBP4-213ENST00000602088 ACCSQ96QU6 501 aa18.26■□□□□ 0.51
SSBP4-213ENST00000602088 MSTO1Q9BUK6 570 aa18.26■□□□□ 0.51
SSBP4-213ENST00000602088 HERC2P3Q9BVR0 1158 aa18.26■□□□□ 0.51
SSBP4-213ENST00000602088 COL25A1Q9BXS0 654 aaPredicted RBP18.26■□□□□ 0.51
SSBP4-213ENST00000602088 FGFBP2Q9BYJ0 223 aa18.26■□□□□ 0.51
SSBP4-213ENST00000602088 GPR62Q9BZJ7 368 aa18.26■□□□□ 0.51
SSBP4-213ENST00000602088 IKZF4Q9H2S9 585 aa18.26■□□□□ 0.51
SSBP4-213ENST00000602088 CLEC1BQ9P126 229 aa18.26■□□□□ 0.51
SSBP4-213ENST00000602088 SERTAD1Q9UHV2 236 aa18.26■□□□□ 0.51
SSBP4-213ENST00000602088 TISP43B9A030 160 aa18.25■□□□□ 0.51
SSBP4-213ENST00000602088 ACTN4O43707 911 aaKnown RBP18.25■□□□□ 0.51
SSBP4-213ENST00000602088 KIF4AO95239 1232 aa18.25■□□□□ 0.51
SSBP4-213ENST00000602088 MYBP10242 640 aa18.25■□□□□ 0.51
SSBP4-213ENST00000602088 CASP1P29466 404 aa18.25■□□□□ 0.51
SSBP4-213ENST00000602088 TNFSF9P41273 254 aa18.25■□□□□ 0.51
SSBP4-213ENST00000602088 NDUFV1P49821 464 aa18.25■□□□□ 0.51
SSBP4-213ENST00000602088 SOX4Q06945 474 aaPredicted RBP18.25■□□□□ 0.51
SSBP4-213ENST00000602088 SLFN12LQ6IEE8 588 aa18.25■□□□□ 0.51
SSBP4-213ENST00000602088 FUT10Q6P4F1 479 aa18.25■□□□□ 0.51
SSBP4-213ENST00000602088 CEP57L1Q8IYX8 460 aa18.25■□□□□ 0.51
SSBP4-213ENST00000602088 UROC1Q96N76 676 aa18.25■□□□□ 0.51
SSBP4-213ENST00000602088 PLEKHA5Q9HAU0 1116 aa18.25■□□□□ 0.51
SSBP4-213ENST00000602088 GOLGA2P5Q9HBQ8 144 aa18.25■□□□□ 0.51
SSBP4-213ENST00000602088 GDPD2Q9HCC8 539 aa18.25■□□□□ 0.51
SSBP4-213ENST00000602088 MRPL17Q9NRX2 175 aaKnown RBP18.25■□□□□ 0.51
SSBP4-213ENST00000602088 CHST7Q9NS84 486 aa18.25■□□□□ 0.51
SSBP4-213ENST00000602088 SLC38A7Q9NVC3 462 aa18.25■□□□□ 0.51
SSBP4-213ENST00000602088 BDP1A6H8Y1 2624 aa18.25■□□□□ 0.51
SSBP4-213ENST00000602088 TCF20Q9UGU0 1960 aaKnown RBP18.24■□□□□ 0.51
SSBP4-213ENST00000602088 C5orf42Q9H799 3197 aa18.24■□□□□ 0.51
SSBP4-213ENST00000602088 A0A1W2PQ27 194 aa18.24■□□□□ 0.51
SSBP4-213ENST00000602088 A0A1W2PQ64 194 aa18.24■□□□□ 0.51
SSBP4-213ENST00000602088 A0A1W2PQD8 194 aa18.24■□□□□ 0.51
SSBP4-213ENST00000602088 TTC26A0AVF1 554 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms