RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 LMO3Q8TAP4 145 aa19.47■□□□□ 0.71
VRK3-225ENST00000601912 DEFB118Q96PH6 123 aa19.47■□□□□ 0.71
VRK3-225ENST00000601912 RAB20Q9NX57 234 aa19.47■□□□□ 0.71
VRK3-225ENST00000601912 FHOD1Q9Y613 1164 aa19.47■□□□□ 0.71
VRK3-225ENST00000601912 CDK17Q00537 523 aa19.46■□□□□ 0.71
VRK3-225ENST00000601912 BIRC3Q13489 604 aa19.46■□□□□ 0.71
VRK3-225ENST00000601912 MTFR1Q15390 333 aa19.46■□□□□ 0.71
VRK3-225ENST00000601912 ENOX2Q16206 610 aaKnown RBP19.46■□□□□ 0.71
VRK3-225ENST00000601912 ZACNQ401N2 412 aa19.46■□□□□ 0.71
VRK3-225ENST00000601912 C15orf39Q6ZRI6 1047 aa19.46■□□□□ 0.71
VRK3-225ENST00000601912 CTU1Q7Z7A3 348 aaKnown RBP19.46■□□□□ 0.71
VRK3-225ENST00000601912 CEP120Q8N960 986 aa19.46■□□□□ 0.71
VRK3-225ENST00000601912 ZNF516Q92618 1163 aa19.46■□□□□ 0.71
VRK3-225ENST00000601912 TRMT13Q9NUP7 481 aaKnown RBP19.46■□□□□ 0.71
VRK3-225ENST00000601912 PIN4Q9Y237 131 aaKnown RBP19.46■□□□□ 0.71
VRK3-225ENST00000601912 FRMPD3Q5JV73 1810 aa19.46■□□□□ 0.71
VRK3-225ENST00000601912 SOWAHDA6NJG2 315 aa19.46■□□□□ 0.71
VRK3-225ENST00000601912 ZNF500O60304 480 aaPredicted RBP19.46■□□□□ 0.71
VRK3-225ENST00000601912 C4BPAP04003 597 aaKnown RBP19.46■□□□□ 0.71
VRK3-225ENST00000601912 WNT7BP56706 349 aa19.46■□□□□ 0.71
VRK3-225ENST00000601912 RAPGEF1Q13905 1077 aa19.46■□□□□ 0.71
VRK3-225ENST00000601912 LMBRD2Q68DH5 695 aaPredicted RBP19.46■□□□□ 0.71
VRK3-225ENST00000601912 WDR59Q6PJI9 974 aa19.46■□□□□ 0.71
VRK3-225ENST00000601912 FMNL3Q8IVF7 1028 aa19.46■□□□□ 0.71
VRK3-225ENST00000601912 TAS1R2Q8TE23 839 aa19.46■□□□□ 0.71
VRK3-225ENST00000601912 WNT8BQ93098 351 aa19.46■□□□□ 0.71
VRK3-225ENST00000601912 ACAP3Q96P50 834 aa19.46■□□□□ 0.71
VRK3-225ENST00000601912 CCDC94Q9BW85 323 aaPredicted RBP19.46■□□□□ 0.71
VRK3-225ENST00000601912 TRIM6Q9C030 488 aaPredicted RBP19.46■□□□□ 0.71
VRK3-225ENST00000601912 DNAJC12Q9UKB3 198 aa19.46■□□□□ 0.71
VRK3-225ENST00000601912 B4GALT4O60513 344 aa19.45■□□□□ 0.7
VRK3-225ENST00000601912 PHACTR2O75167 634 aa19.45■□□□□ 0.7
VRK3-225ENST00000601912 RPS6KA5O75582 802 aa19.45■□□□□ 0.7
VRK3-225ENST00000601912 NPTXRO95502 500 aa19.45■□□□□ 0.7
VRK3-225ENST00000601912 CHRNA1P02708 482 aa19.45■□□□□ 0.7
VRK3-225ENST00000601912 CTSHP09668 335 aa19.45■□□□□ 0.7
VRK3-225ENST00000601912 CXCL8P10145 99 aa19.45■□□□□ 0.7
VRK3-225ENST00000601912 GRM5P41594 1212 aa19.45■□□□□ 0.7
VRK3-225ENST00000601912 DUOXA2Q1HG44 320 aa19.45■□□□□ 0.7
VRK3-225ENST00000601912 IQCEQ6IPM2 695 aa19.45■□□□□ 0.7
VRK3-225ENST00000601912 SLC43A3Q8NBI5 491 aa19.45■□□□□ 0.7
VRK3-225ENST00000601912 STK33Q9BYT3 514 aa19.45■□□□□ 0.7
VRK3-225ENST00000601912 SENP6Q9GZR1 1112 aaPredicted RBP19.45■□□□□ 0.7
VRK3-225ENST00000601912 ARVCFO00192 962 aa19.44■□□□□ 0.7
VRK3-225ENST00000601912 CCP110O43303 1012 aa19.44■□□□□ 0.7
VRK3-225ENST00000601912 ZC3H11AO75152 810 aaKnown RBP eCLIP19.44■□□□□ 0.7
VRK3-225ENST00000601912 CAND2O75155 1236 aa19.44■□□□□ 0.7
VRK3-225ENST00000601912 TDRD10Q5VZ19 366 aaKnown RBP19.44■□□□□ 0.7
VRK3-225ENST00000601912 PHLDB3Q6NSJ2 640 aa19.44■□□□□ 0.7
VRK3-225ENST00000601912 GJB7Q6PEY0 223 aa19.44■□□□□ 0.7
VRK3-225ENST00000601912 SEMA4DQ92854 862 aa19.44■□□□□ 0.7
VRK3-225ENST00000601912 NT5C1BQ96P26 610 aa19.44■□□□□ 0.7
VRK3-225ENST00000601912 CHP1Q99653 195 aa19.44■□□□□ 0.7
VRK3-225ENST00000601912 ASB7Q9H672 318 aa19.44■□□□□ 0.7
VRK3-225ENST00000601912 UBE2TQ9NPD8 197 aaPredicted RBP19.44■□□□□ 0.7
VRK3-225ENST00000601912 AIPL1Q9NZN9 384 aa19.44■□□□□ 0.7
VRK3-225ENST00000601912 OGDHLQ9ULD0 1010 aa19.44■□□□□ 0.7
VRK3-225ENST00000601912 NOC2LQ9Y3T9 749 aaKnown RBP19.44■□□□□ 0.7
VRK3-225ENST00000601912 STAT1P42224 750 aa19.43■□□□□ 0.7
VRK3-225ENST00000601912 PIK3CAP42336 1068 aa19.43■□□□□ 0.7
VRK3-225ENST00000601912 MGAT3Q09327 533 aa19.43■□□□□ 0.7
VRK3-225ENST00000601912 ASIC2Q16515 512 aa19.43■□□□□ 0.7
VRK3-225ENST00000601912 WDR44Q5JSH3 913 aa19.43■□□□□ 0.7
VRK3-225ENST00000601912 FAM228AQ86W67 206 aa19.43■□□□□ 0.7
VRK3-225ENST00000601912 CD302Q8IX05 232 aa19.43■□□□□ 0.7
VRK3-225ENST00000601912 TMEM192Q8IY95 271 aa19.43■□□□□ 0.7
VRK3-225ENST00000601912 ANKRD36BP1Q96IX9 119 aa19.43■□□□□ 0.7
VRK3-225ENST00000601912 FAM81BQ96LP2 452 aa19.43■□□□□ 0.7
VRK3-225ENST00000601912 PTPRJQ12913 1337 aa19.43■□□□□ 0.7
VRK3-225ENST00000601912 MROH7Q68CQ1 1323 aa19.43■□□□□ 0.7
VRK3-225ENST00000601912 GPR182O15218 404 aa19.43■□□□□ 0.7
VRK3-225ENST00000601912 HLA-DRAP01903 254 aa19.43■□□□□ 0.7
VRK3-225ENST00000601912 TNNC2P02585 160 aa19.43■□□□□ 0.7
VRK3-225ENST00000601912 TMEM191BP0C7N4 346 aa19.43■□□□□ 0.7
VRK3-225ENST00000601912 HSPA8P11142 646 aaKnown RBP19.43■□□□□ 0.7
VRK3-225ENST00000601912 YARSP54577 528 aaKnown RBP19.43■□□□□ 0.7
VRK3-225ENST00000601912 JAM2P57087 298 aa19.43■□□□□ 0.7
VRK3-225ENST00000601912 TFAMQ00059 246 aaKnown RBP19.43■□□□□ 0.7
VRK3-225ENST00000601912 PKN2Q16513 984 aaKnown RBP19.43■□□□□ 0.7
VRK3-225ENST00000601912 E4F1Q66K89 784 aaPredicted RBP19.43■□□□□ 0.7
VRK3-225ENST00000601912 FBXO46Q6PJ61 603 aaPredicted RBP19.43■□□□□ 0.7
VRK3-225ENST00000601912 RAD9BQ6WBX8 426 aa19.43■□□□□ 0.7
VRK3-225ENST00000601912 CCDC170Q8IYT3 715 aa19.43■□□□□ 0.7
VRK3-225ENST00000601912 C17orf53Q8N3J3 647 aaPredicted RBP19.43■□□□□ 0.7
VRK3-225ENST00000601912 OR5B17Q8NGF7 314 aa19.43■□□□□ 0.7
VRK3-225ENST00000601912 NHEJ1Q9H9Q4 299 aaPredicted RBP19.43■□□□□ 0.7
VRK3-225ENST00000601912 KCND1Q9NSA2 647 aa19.43■□□□□ 0.7
VRK3-225ENST00000601912 ST3GAL5Q9UNP4 418 aa19.43■□□□□ 0.7
VRK3-225ENST00000601912 LACTBL1A8MY62 500 aa19.42■□□□□ 0.7
VRK3-225ENST00000601912 ZSCAN12O43309 604 aa19.42■□□□□ 0.7
VRK3-225ENST00000601912 SERPING1P05155 500 aa19.42■□□□□ 0.7
VRK3-225ENST00000601912 CCDC172P0C7W6 258 aa19.42■□□□□ 0.7
VRK3-225ENST00000601912 CYLC1P35663 651 aaPredicted RBP19.42■□□□□ 0.7
VRK3-225ENST00000601912 MFAP3P55082 362 aa19.42■□□□□ 0.7
VRK3-225ENST00000601912 NFX1Q12986 1120 aaKnown RBP19.42■□□□□ 0.7
VRK3-225ENST00000601912 DRAP1Q14919 205 aaPredicted RBP19.42■□□□□ 0.7
VRK3-225ENST00000601912 CCAR2Q8N163 923 aaKnown RBP19.42■□□□□ 0.7
VRK3-225ENST00000601912 PPM1KQ8N3J5 372 aa19.42■□□□□ 0.7
VRK3-225ENST00000601912 DHX38Q92620 1227 aaKnown RBP19.42■□□□□ 0.7
VRK3-225ENST00000601912 CCDC42Q96M95 316 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms