RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	CIDEB	Q9UHD4	219 aa		12.51	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	DRG1	Q9Y295	367 aa	Known RBP	12.51	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	EFR3B	Q9Y2G0	817 aa		12.51	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	FOCAD	Q5VW36	1801 aa		12.51	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	RASA4B	C9J798	803 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	KLF11	O14901	512 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	RASA4	O43374	803 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	MED24	O75448	989 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	SPAG6	O75602	509 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	HLA-DOA	P06340	250 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	LINGO3	P0C6S8	592 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	SPATA31C1	P0DKV0	1188 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	COMT	P21964	271 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	HOXD13	P35453	343 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	IFNAR2	P48551	515 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	RPS6KA3	P51812	740 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	KRT17	Q04695	432 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	SLC34A1	Q06495	639 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	MORF4L2	Q15014	288 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	ERFE	Q4G0M1	354 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	LRRC38	Q5VT99	294 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	ANO7	Q6IWH7	933 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	CHSY1	Q86X52	802 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	ECHDC2	Q86YB7	292 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	SAMD3	Q8N6K7	520 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	FAM13C	Q8NE31	585 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	SPDYE1	Q8NFV5	336 aa	Predicted RBP	12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	ZNF564	Q8TBZ8	553 aa	Predicted RBP	12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	TEKT4	Q8WW24	435 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	NCSTN	Q92542	709 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	ITFG2	Q969R8	447 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	FAM136A	Q96C01	138 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	SETDB2	Q96T68	719 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	MRI	Q9BWK5	157 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	STRA6	Q9BX79	667 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	AMN	Q9BXJ7	453 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	FRMD8	Q9BZ67	464 aa	Predicted RBP	12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	GPR88	Q9GZN0	384 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	EPB41L1	Q9H4G0	881 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	DNAJC18	Q9H819	358 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	GPAM	Q9HCL2	828 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	MRPL47	Q9HD33	250 aa	Known RBP	12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	ERVK-5	Q9HDB9	667 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	AGPAT3	Q9NRZ7	376 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	TMEM260	Q9NX78	707 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	WDR35	Q9P2L0	1181 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	ANKFY1	Q9P2R3	1169 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	NARF	Q9UHQ1	456 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	EXOC7	Q9UPT5	735 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	SHOC2	Q9UQ13	582 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	NAALADL1	Q9UQQ1	740 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	COQ4	Q9Y3A0	265 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	CD2AP	Q9Y5K6	639 aa		12.5	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	DOT1L	Q8TEK3	1739 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	MPHOSPH10	O00566	681 aa	Known RBP	12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	GOLGA8H	P0CJ92	632 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	PIM1	P11309	404 aa	Predicted RBP	12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	KRT15	P19012	456 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	IVD	P26440	423 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	BTD	P43251	543 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	RAB27A	P51159	221 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	RAP1GDS1	P52306	607 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	AP1B1	Q10567	949 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	GRAP	Q13588	217 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	ITGA9	Q13797	1035 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	CCDC6	Q16204	474 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	KLHL38	Q2WGJ6	581 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	EPC2	Q52LR7	807 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	RINT1	Q6NUQ1	792 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	AAGAB	Q6PD74	315 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	CCDC174	Q6PII3	467 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	C1orf186	Q6ZWK4	172 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	FAM178B	Q8IXR5	827 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	KATNAL2	Q8IYT4	538 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	GLIS3	Q8NEA6	775 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	EXD1	Q8NHP7	514 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	LMO3	Q8TAP4	145 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	GRAPL	Q8TC17	118 aa	Predicted RBP	12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	PSPC1	Q8WXF1	523 aa	Known RBP	12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	IRGQ	Q8WZA9	623 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	SHC3	Q92529	594 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	STMN2	Q93045	179 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	ZNF333	Q96JL9	665 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	HSD17B14	Q9BPX1	270 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	CENPK	Q9BS16	269 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	BTBD10	Q9BSF8	475 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	TBC1D10A	Q9BXI6	508 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	TRIM4	Q9C037	500 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	C17orf75	Q9HAS0	396 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	CYLD	Q9NQC7	956 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	KCNQ5	Q9NR82	932 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	TMCO1	Q9UM00	188 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	PHTF1	Q9UMS5	762 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	STK38L	Q9Y2H1	464 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	COMMD3-BMI1	R4GMX3	469 aa		12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	BAZ2B	Q9UIF8	2168 aa	Known RBP	12.49	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	ZMYM2	Q9UBW7	1377 aa		12.48	□□□□□ -0.41
U2AF1L4-221	ENST00000601236	BTBD19	C9JJ37	291 aa		12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms