RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 LPXNO60711 386 aa12.54□□□□□ -0.4
ZNF548-211ENST00000600927 FOSL2P15408 326 aa12.54□□□□□ -0.4
ZNF548-211ENST00000600927 GARTP22102 1010 aa12.54□□□□□ -0.4
ZNF548-211ENST00000600927 EIF4BP23588 611 aaKnown RBP12.54□□□□□ -0.4
ZNF548-211ENST00000600927 HNRNPH3P31942 346 aaKnown RBP12.54□□□□□ -0.4
ZNF548-211ENST00000600927 ZBED6P86452 979 aa12.54□□□□□ -0.4
ZNF548-211ENST00000600927 CDC42EP1Q00587 391 aa12.54□□□□□ -0.4
ZNF548-211ENST00000600927 MXD4Q14582 209 aaPredicted RBP12.54□□□□□ -0.4
ZNF548-211ENST00000600927 EMC2Q15006 297 aa12.54□□□□□ -0.4
ZNF548-211ENST00000600927 ZC2HC1CQ53FD0 456 aaPredicted RBP12.54□□□□□ -0.4
ZNF548-211ENST00000600927 FAM117BQ6P1L5 589 aa12.54□□□□□ -0.4
ZNF548-211ENST00000600927 ZNF410Q86VK4 478 aa12.54□□□□□ -0.4
ZNF548-211ENST00000600927 DNAJC7Q99615 494 aa12.54□□□□□ -0.4
ZNF548-211ENST00000600927 ZBED2Q9BTP6 218 aa12.54□□□□□ -0.4
ZNF548-211ENST00000600927 TTYH3Q9C0H2 523 aa12.54□□□□□ -0.4
ZNF548-211ENST00000600927 KIAA1586Q9HCI6 787 aa12.54□□□□□ -0.4
ZNF548-211ENST00000600927 PLCB1Q9NQ66 1216 aa12.54□□□□□ -0.4
ZNF548-211ENST00000600927 RRAGDQ9NQL2 400 aaPredicted RBP12.54□□□□□ -0.4
ZNF548-211ENST00000600927 RGS18Q9NS28 235 aa12.54□□□□□ -0.4
ZNF548-211ENST00000600927 FBXL5Q9UKA1 691 aa12.54□□□□□ -0.4
ZNF548-211ENST00000600927 PYCARDQ9ULZ3 195 aa12.54□□□□□ -0.4
ZNF548-211ENST00000600927 GINS2Q9Y248 185 aa12.54□□□□□ -0.4
ZNF548-211ENST00000600927 SIK3Q9Y2K2 1263 aa12.54□□□□□ -0.4
ZNF548-211ENST00000600927 ZMYM2Q9UBW7 1377 aa12.54□□□□□ -0.4
ZNF548-211ENST00000600927 XIRP2A4UGR9 3374 aa12.53□□□□□ -0.4
ZNF548-211ENST00000600927 GOLGA6L9A6NEM1 432 aa12.53□□□□□ -0.4
ZNF548-211ENST00000600927 C9IYK1 514 aa12.53□□□□□ -0.4
ZNF548-211ENST00000600927 KIF2AO00139 706 aaPredicted RBP12.53□□□□□ -0.4
ZNF548-211ENST00000600927 PES1O00541 588 aaKnown RBP12.53□□□□□ -0.4
ZNF548-211ENST00000600927 DGKIO75912 1065 aa12.53□□□□□ -0.4
ZNF548-211ENST00000600927 AKAP3O75969 853 aa12.53□□□□□ -0.4
ZNF548-211ENST00000600927 PIGRP01833 764 aa12.53□□□□□ -0.4
ZNF548-211ENST00000600927 AFPP02771 609 aaKnown RBP12.53□□□□□ -0.4
ZNF548-211ENST00000600927 TRIM21P19474 475 aaKnown RBP12.53□□□□□ -0.4
ZNF548-211ENST00000600927 CASP14P31944 242 aa12.53□□□□□ -0.4
ZNF548-211ENST00000600927 KRT9P35527 623 aa12.53□□□□□ -0.4
ZNF548-211ENST00000600927 EFNA5P52803 228 aa12.53□□□□□ -0.4
ZNF548-211ENST00000600927 FAM189BP81408 668 aa12.53□□□□□ -0.4
ZNF548-211ENST00000600927 KCNA1Q09470 495 aa12.53□□□□□ -0.4
ZNF548-211ENST00000600927 KCNH2Q12809 1159 aa12.53□□□□□ -0.4
ZNF548-211ENST00000600927 SYCP1Q15431 976 aa12.53□□□□□ -0.4
ZNF548-211ENST00000600927 SMYD5Q6GMV2 418 aa12.53□□□□□ -0.4
ZNF548-211ENST00000600927 INTS8Q75QN2 995 aaKnown RBP12.53□□□□□ -0.4
ZNF548-211ENST00000600927 USP37Q86T82 979 aa12.53□□□□□ -0.4
ZNF548-211ENST00000600927 NPAS4Q8IUM7 802 aa12.53□□□□□ -0.4
ZNF548-211ENST00000600927 TMEM139Q8IV31 216 aa12.53□□□□□ -0.4
ZNF548-211ENST00000600927 SYN2Q92777 582 aaPredicted RBP12.53□□□□□ -0.4
ZNF548-211ENST00000600927 TGS1Q96RS0 853 aaKnown RBP12.53□□□□□ -0.4
ZNF548-211ENST00000600927 IFT122Q9HBG6 1241 aa12.53□□□□□ -0.4
ZNF548-211ENST00000600927 SUCLA2Q9P2R7 463 aaPredicted RBP12.53□□□□□ -0.4
ZNF548-211ENST00000600927 MYO6Q9UM54 1294 aa12.53□□□□□ -0.4
ZNF548-211ENST00000600927 ADGRA3Q8IWK6 1321 aa12.53□□□□□ -0.4
ZNF548-211ENST00000600927 RALGAPA2Q2PPJ7 1873 aa12.53□□□□□ -0.4
ZNF548-211ENST00000600927 MYH11P35749 1972 aa12.52□□□□□ -0.4
ZNF548-211ENST00000600927 A0A087WZ62 844 aa12.52□□□□□ -0.41
ZNF548-211ENST00000600927 TTC26A0AVF1 554 aa12.52□□□□□ -0.41
ZNF548-211ENST00000600927 CCDC169A6NNP5 214 aa12.52□□□□□ -0.41
ZNF548-211ENST00000600927 SLC16A4O15374 487 aa12.52□□□□□ -0.41
ZNF548-211ENST00000600927 ZSCAN12O43309 604 aa12.52□□□□□ -0.41
ZNF548-211ENST00000600927 N4BP1O75113 896 aaKnown RBP12.52□□□□□ -0.41
ZNF548-211ENST00000600927 ADKP55263 362 aaKnown RBP12.52□□□□□ -0.41
ZNF548-211ENST00000600927 NFX1Q12986 1120 aaKnown RBP12.52□□□□□ -0.41
ZNF548-211ENST00000600927 MEA1Q16626 185 aa12.52□□□□□ -0.41
ZNF548-211ENST00000600927 SLFN12LQ6IEE8 588 aa12.52□□□□□ -0.41
ZNF548-211ENST00000600927 CYP26C1Q6V0L0 522 aa12.52□□□□□ -0.41
ZNF548-211ENST00000600927 MAEAQ7L5Y9 396 aa12.52□□□□□ -0.41
ZNF548-211ENST00000600927 RHPN2Q8IUC4 686 aa12.52□□□□□ -0.41
ZNF548-211ENST00000600927 FMNL3Q8IVF7 1028 aa12.52□□□□□ -0.41
ZNF548-211ENST00000600927 FAM186BQ8IYM0 893 aa12.52□□□□□ -0.41
ZNF548-211ENST00000600927 XXYLT1Q8NBI6 393 aa12.52□□□□□ -0.41
ZNF548-211ENST00000600927 MAFAQ8NHW3 353 aaPredicted RBP12.52□□□□□ -0.41
ZNF548-211ENST00000600927 NLRP7Q8WX94 980 aa12.52□□□□□ -0.41
ZNF548-211ENST00000600927 CLP1Q92989 425 aaKnown RBP12.52□□□□□ -0.41
ZNF548-211ENST00000600927 FBXL18Q96ME1 805 aa12.52□□□□□ -0.41
ZNF548-211ENST00000600927 YME1L1Q96TA2 773 aa12.52□□□□□ -0.41
ZNF548-211ENST00000600927 GAS2L1Q99501 681 aaPredicted RBP12.52□□□□□ -0.41
ZNF548-211ENST00000600927 FDXACB1Q9BRP7 624 aaPredicted RBP12.52□□□□□ -0.41
ZNF548-211ENST00000600927 TRAIPQ9BWF2 469 aa12.52□□□□□ -0.41
ZNF548-211ENST00000600927 POLR3FQ9H1D9 316 aaPredicted RBP12.52□□□□□ -0.41
ZNF548-211ENST00000600927 C2orf40Q9H1Z8 148 aa12.52□□□□□ -0.41
ZNF548-211ENST00000600927 GPRC5CQ9NQ84 441 aa12.52□□□□□ -0.41
ZNF548-211ENST00000600927 C1orf112Q9NSG2 853 aa12.52□□□□□ -0.41
ZNF548-211ENST00000600927 ABHD10Q9NUJ1 306 aa12.52□□□□□ -0.41
ZNF548-211ENST00000600927 ZNHIT6Q9NWK9 470 aaKnown RBP12.52□□□□□ -0.41
ZNF548-211ENST00000600927 PLAGL2Q9UPG8 496 aa12.52□□□□□ -0.41
ZNF548-211ENST00000600927 STYXL1Q9Y6J8 313 aa12.52□□□□□ -0.41
ZNF548-211ENST00000600927 DENND3A2RUS2 1198 aa12.51□□□□□ -0.41
ZNF548-211ENST00000600927 CLIC2O15247 247 aa12.51□□□□□ -0.41
ZNF548-211ENST00000600927 EXOC3O60645 756 aa12.51□□□□□ -0.41
ZNF548-211ENST00000600927 UPP2O95045 317 aa12.51□□□□□ -0.41
ZNF548-211ENST00000600927 LDHAP00338 332 aaKnown RBP12.51□□□□□ -0.41
ZNF548-211ENST00000600927 KRT13P13646 458 aa12.51□□□□□ -0.41
ZNF548-211ENST00000600927 KCNMA1Q12791 1236 aa12.51□□□□□ -0.41
ZNF548-211ENST00000600927 CEP135Q66GS9 1140 aa12.51□□□□□ -0.41
ZNF548-211ENST00000600927 SLC24A5Q71RS6 500 aa12.51□□□□□ -0.41
ZNF548-211ENST00000600927 IFNLR1Q8IU57 520 aaPredicted RBP12.51□□□□□ -0.41
ZNF548-211ENST00000600927 KSR1Q8IVT5 923 aa12.51□□□□□ -0.41
ZNF548-211ENST00000600927 CCDC170Q8IYT3 715 aa12.51□□□□□ -0.41
ZNF548-211ENST00000600927 NEK11Q8NG66 645 aa12.51□□□□□ -0.41
ZNF548-211ENST00000600927 PRPF31Q8WWY3 499 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms