RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 GRK4P32298 578 aa19.09■□□□□ 0.65
SHKBP1-224ENST00000600718 EIF4A3P38919 411 aaKnown RBP19.09■□□□□ 0.65
SHKBP1-224ENST00000600718 CRYBB1P53674 252 aaPredicted RBP19.09■□□□□ 0.65
SHKBP1-224ENST00000600718 RBM10P98175 930 aaKnown RBP19.09■□□□□ 0.65
SHKBP1-224ENST00000600718 IRF2BP2Q7Z5L9 587 aa19.09■□□□□ 0.65
SHKBP1-224ENST00000600718 TAS1R2Q8TE23 839 aa19.09■□□□□ 0.65
SHKBP1-224ENST00000600718 CPB2Q96IY4 423 aa19.09■□□□□ 0.65
SHKBP1-224ENST00000600718 C16orf45Q96MC5 204 aaPredicted RBP19.09■□□□□ 0.65
SHKBP1-224ENST00000600718 BEGAINQ9BUH8 593 aa19.09■□□□□ 0.65
SHKBP1-224ENST00000600718 HMX1Q9NP08 348 aaPredicted RBP19.09■□□□□ 0.65
SHKBP1-224ENST00000600718 GINS2Q9Y248 185 aa19.09■□□□□ 0.65
SHKBP1-224ENST00000600718 KIF2AO00139 706 aaPredicted RBP19.08■□□□□ 0.65
SHKBP1-224ENST00000600718 ZC3H11AO75152 810 aaKnown RBP eCLIP19.08■□□□□ 0.65
SHKBP1-224ENST00000600718 IPO7O95373 1038 aaKnown RBP19.08■□□□□ 0.65
SHKBP1-224ENST00000600718 MYCNP04198 464 aaPredicted RBP19.08■□□□□ 0.65
SHKBP1-224ENST00000600718 PLEKP08567 350 aaPredicted RBP19.08■□□□□ 0.65
SHKBP1-224ENST00000600718 EIF4BP23588 611 aaKnown RBP19.08■□□□□ 0.65
SHKBP1-224ENST00000600718 KLHL30Q0D2K2 578 aa19.08■□□□□ 0.65
SHKBP1-224ENST00000600718 DRAP1Q14919 205 aaPredicted RBP19.08■□□□□ 0.65
SHKBP1-224ENST00000600718 APBB1IPQ7Z5R6 666 aaPredicted RBP19.08■□□□□ 0.65
SHKBP1-224ENST00000600718 CDR2LQ86X02 465 aaPredicted RBP19.08■□□□□ 0.65
SHKBP1-224ENST00000600718 WDR49Q8IV35 697 aa19.08■□□□□ 0.65
SHKBP1-224ENST00000600718 OSMRQ99650 979 aa19.08■□□□□ 0.65
SHKBP1-224ENST00000600718 ADPGKQ9BRR6 497 aa19.08■□□□□ 0.65
SHKBP1-224ENST00000600718 DEF6Q9H4E7 631 aa19.08■□□□□ 0.65
SHKBP1-224ENST00000600718 RPF1Q9H9Y2 349 aaKnown RBP19.08■□□□□ 0.65
SHKBP1-224ENST00000600718 UBE2TQ9NPD8 197 aaPredicted RBP19.08■□□□□ 0.65
SHKBP1-224ENST00000600718 IL18RAPO95256 599 aa19.08■□□□□ 0.64
SHKBP1-224ENST00000600718 RPLP2P05387 115 aaKnown RBP19.08■□□□□ 0.64
SHKBP1-224ENST00000600718 CLTAP09496 248 aa19.08■□□□□ 0.64
SHKBP1-224ENST00000600718 FERP16591 822 aa19.08■□□□□ 0.64
SHKBP1-224ENST00000600718 SOX5P35711 763 aa19.08■□□□□ 0.64
SHKBP1-224ENST00000600718 TDRD12Q587J7 1177 aaKnown RBP19.08■□□□□ 0.64
SHKBP1-224ENST00000600718 GDF6Q6KF10 455 aaPredicted RBP19.08■□□□□ 0.64
SHKBP1-224ENST00000600718 CATSPER4Q7RTX7 472 aa19.08■□□□□ 0.64
SHKBP1-224ENST00000600718 RSPH3Q86UC2 560 aa19.08■□□□□ 0.64
SHKBP1-224ENST00000600718 ACRBPQ8NEB7 543 aa19.08■□□□□ 0.64
SHKBP1-224ENST00000600718 F8VZ95 297 aa19.07■□□□□ 0.64
SHKBP1-224ENST00000600718 CCDC172P0C7W6 258 aa19.07■□□□□ 0.64
SHKBP1-224ENST00000600718 TNNT1P13805 278 aa19.07■□□□□ 0.64
SHKBP1-224ENST00000600718 AXLP30530 894 aa19.07■□□□□ 0.64
SHKBP1-224ENST00000600718 PRKCIP41743 596 aa19.07■□□□□ 0.64
SHKBP1-224ENST00000600718 SPA17Q15506 151 aa19.07■□□□□ 0.64
SHKBP1-224ENST00000600718 ASTE1Q2TB18 679 aaPredicted RBP19.07■□□□□ 0.64
SHKBP1-224ENST00000600718 FAM47CQ5HY64 1035 aa19.07■□□□□ 0.64
SHKBP1-224ENST00000600718 LMBRD2Q68DH5 695 aaPredicted RBP19.07■□□□□ 0.64
SHKBP1-224ENST00000600718 ARHGEF19Q8IW93 802 aa19.07■□□□□ 0.64
SHKBP1-224ENST00000600718 FAM81BQ96LP2 452 aa19.07■□□□□ 0.64
SHKBP1-224ENST00000600718 NT5C1BQ96P26 610 aa19.07■□□□□ 0.64
SHKBP1-224ENST00000600718 TRIM17Q9Y577 477 aa19.07■□□□□ 0.64
SHKBP1-224ENST00000600718 PTPRJQ12913 1337 aa19.06■□□□□ 0.64
SHKBP1-224ENST00000600718 AKR1B10O60218 316 aa19.06■□□□□ 0.64
SHKBP1-224ENST00000600718 B4GALT4O60513 344 aa19.06■□□□□ 0.64
SHKBP1-224ENST00000600718 LRRN2O75325 713 aa19.06■□□□□ 0.64
SHKBP1-224ENST00000600718 LCA5LO95447 670 aa19.06■□□□□ 0.64
SHKBP1-224ENST00000600718 STAG3L1P0CL83 205 aa19.06■□□□□ 0.64
SHKBP1-224ENST00000600718 FGFR4P22455 802 aa19.06■□□□□ 0.64
SHKBP1-224ENST00000600718 KIF11P52732 1056 aa19.06■□□□□ 0.64
SHKBP1-224ENST00000600718 ARID5AQ03989 594 aa19.06■□□□□ 0.64
SHKBP1-224ENST00000600718 BIRC3Q13489 604 aa19.06■□□□□ 0.64
SHKBP1-224ENST00000600718 SNX17Q15036 470 aa19.06■□□□□ 0.64
SHKBP1-224ENST00000600718 ENOX2Q16206 610 aaKnown RBP19.06■□□□□ 0.64
SHKBP1-224ENST00000600718 DCAF4L1Q3SXM0 396 aa19.06■□□□□ 0.64
SHKBP1-224ENST00000600718 TDRD10Q5VZ19 366 aaKnown RBP19.06■□□□□ 0.64
SHKBP1-224ENST00000600718 FAM212AQ96EL1 285 aa19.06■□□□□ 0.64
SHKBP1-224ENST00000600718 TSEN34Q9BSV6 310 aaKnown RBP19.06■□□□□ 0.64
SHKBP1-224ENST00000600718 REXO2Q9Y3B8 237 aaKnown RBP19.06■□□□□ 0.64
SHKBP1-224ENST00000600718 SCN10AQ9Y5Y9 1956 aa19.06■□□□□ 0.64
SHKBP1-224ENST00000600718 HLA-DRAP01903 254 aa19.06■□□□□ 0.64
SHKBP1-224ENST00000600718 HOXA11P31270 313 aaPredicted RBP19.06■□□□□ 0.64
SHKBP1-224ENST00000600718 MFAP3P55082 362 aa19.06■□□□□ 0.64
SHKBP1-224ENST00000600718 OSTNP61366 133 aa19.06■□□□□ 0.64
SHKBP1-224ENST00000600718 ARHGAP44Q17R89 818 aa19.06■□□□□ 0.64
SHKBP1-224ENST00000600718 DUOXA2Q1HG44 320 aa19.06■□□□□ 0.64
SHKBP1-224ENST00000600718 WDR44Q5JSH3 913 aa19.06■□□□□ 0.64
SHKBP1-224ENST00000600718 LHX8Q68G74 356 aa19.06■□□□□ 0.64
SHKBP1-224ENST00000600718 CEP120Q8N960 986 aa19.06■□□□□ 0.64
SHKBP1-224ENST00000600718 CELF4Q9BZC1 486 aaKnown RBP19.06■□□□□ 0.64
SHKBP1-224ENST00000600718 GPR88Q9GZN0 384 aa19.06■□□□□ 0.64
SHKBP1-224ENST00000600718 PTCH2Q9Y6C5 1203 aa19.06■□□□□ 0.64
SHKBP1-224ENST00000600718 MOXD2PA6NHM9 499 aa19.05■□□□□ 0.64
SHKBP1-224ENST00000600718 M0QZ92 97 aa19.05■□□□□ 0.64
SHKBP1-224ENST00000600718 PHACTR2O75167 634 aa19.05■□□□□ 0.64
SHKBP1-224ENST00000600718 ANXA13P27216 316 aa19.05■□□□□ 0.64
SHKBP1-224ENST00000600718 PIK3CAP42336 1068 aa19.05■□□□□ 0.64
SHKBP1-224ENST00000600718 ACLYP53396 1101 aa19.05■□□□□ 0.64
SHKBP1-224ENST00000600718 PTPN11Q06124 597 aaPredicted RBP19.05■□□□□ 0.64
SHKBP1-224ENST00000600718 ENOSF1Q7L5Y1 443 aa19.05■□□□□ 0.64
SHKBP1-224ENST00000600718 RPAINQ86UA6 219 aa19.05■□□□□ 0.64
SHKBP1-224ENST00000600718 SERINC5Q86VE9 423 aa19.05■□□□□ 0.64
SHKBP1-224ENST00000600718 OR5B17Q8NGF7 314 aa19.05■□□□□ 0.64
SHKBP1-224ENST00000600718 HELQQ8TDG4 1101 aa19.05■□□□□ 0.64
SHKBP1-224ENST00000600718 HAUS4Q9H6D7 363 aa19.05■□□□□ 0.64
SHKBP1-224ENST00000600718 GRIN2DO15399 1336 aa19.05■□□□□ 0.64
SHKBP1-224ENST00000600718 FOXN3O00409 490 aaPredicted RBP19.04■□□□□ 0.64
SHKBP1-224ENST00000600718 GFPT2O94808 682 aa19.04■□□□□ 0.64
SHKBP1-224ENST00000600718 VNN1O95497 513 aa19.04■□□□□ 0.64
SHKBP1-224ENST00000600718 MRPS6P82932 125 aaKnown RBP19.04■□□□□ 0.64
SHKBP1-224ENST00000600718 NOTUMQ6P988 496 aa19.04■□□□□ 0.64
SHKBP1-224ENST00000600718 SLC27A1Q6PCB7 646 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms