RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 PLCB3Q01970 1234 aa15.51■□□□□ 0.07
SHKBP1-217ENST00000598558 GRIK3Q13003 919 aa15.51■□□□□ 0.07
SHKBP1-217ENST00000598558 ALCAMQ13740 583 aa15.51■□□□□ 0.07
SHKBP1-217ENST00000598558 CSPP1Q1MSJ5 1256 aa15.51■□□□□ 0.07
SHKBP1-217ENST00000598558 CD300LGQ6UXG3 332 aa15.51■□□□□ 0.07
SHKBP1-217ENST00000598558 TAS1R1Q7RTX1 841 aa15.51■□□□□ 0.07
SHKBP1-217ENST00000598558 C18orf25Q96B23 403 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-217ENST00000598558 MRPL38Q96DV4 380 aaKnown RBP15.51■□□□□ 0.07
SHKBP1-217ENST00000598558 IGSF21Q96ID5 467 aa15.51■□□□□ 0.07
SHKBP1-217ENST00000598558 TIGD1Q96MW7 591 aa15.51■□□□□ 0.07
SHKBP1-217ENST00000598558 PCIF1Q9H4Z3 704 aa15.51■□□□□ 0.07
SHKBP1-217ENST00000598558 GOLGA2P5Q9HBQ8 144 aa15.51■□□□□ 0.07
SHKBP1-217ENST00000598558 AAASQ9NRG9 546 aa15.51■□□□□ 0.07
SHKBP1-217ENST00000598558 LMBRD1Q9NUN5 540 aa15.51■□□□□ 0.07
SHKBP1-217ENST00000598558 EXOC1Q9NV70 894 aa15.51■□□□□ 0.07
SHKBP1-217ENST00000598558 PRG3Q9Y2Y8 225 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-217ENST00000598558 GOLGA8IPA6NC78 632 aa15.5■□□□□ 0.07
SHKBP1-217ENST00000598558 CASTOR2A6NHX0 329 aa15.5■□□□□ 0.07
SHKBP1-217ENST00000598558 GOLGA8JA6NMD2 632 aa15.5■□□□□ 0.07
SHKBP1-217ENST00000598558 EFEMP2O95967 443 aa15.5■□□□□ 0.07
SHKBP1-217ENST00000598558 ALDH2P05091 517 aa15.5■□□□□ 0.07
SHKBP1-217ENST00000598558 THP07101 528 aa15.5■□□□□ 0.07
SHKBP1-217ENST00000598558 KCNE1P15382 129 aa15.5■□□□□ 0.07
SHKBP1-217ENST00000598558 ABCD1P33897 745 aa15.5■□□□□ 0.07
SHKBP1-217ENST00000598558 OR1G1P47890 313 aa15.5■□□□□ 0.07
SHKBP1-217ENST00000598558 ALDH7A1P49419 539 aaKnown RBP15.5■□□□□ 0.07
SHKBP1-217ENST00000598558 UBE2HP62256 183 aa15.5■□□□□ 0.07
SHKBP1-217ENST00000598558 BMT2Q1RMZ1 405 aa15.5■□□□□ 0.07
SHKBP1-217ENST00000598558 APBB1IPQ7Z5R6 666 aaPredicted RBP15.5■□□□□ 0.07
SHKBP1-217ENST00000598558 SYCP3Q8IZU3 236 aa15.5■□□□□ 0.07
SHKBP1-217ENST00000598558 SPATA20Q8TB22 786 aa15.5■□□□□ 0.07
SHKBP1-217ENST00000598558 PPM1EQ8WY54 764 aa15.5■□□□□ 0.07
SHKBP1-217ENST00000598558 RSPH1Q8WYR4 309 aa15.5■□□□□ 0.07
SHKBP1-217ENST00000598558 POMGNT1Q8WZA1 660 aa15.5■□□□□ 0.07
SHKBP1-217ENST00000598558 SAAL1Q96ER3 474 aa15.5■□□□□ 0.07
SHKBP1-217ENST00000598558 RPS6KC1Q96S38 1066 aa15.5■□□□□ 0.07
SHKBP1-217ENST00000598558 TMEM175Q9BSA9 504 aa15.5■□□□□ 0.07
SHKBP1-217ENST00000598558 CNTN3Q9P232 1028 aa15.5■□□□□ 0.07
SHKBP1-217ENST00000598558 AGO2Q9UKV8 859 aaKnown RBP15.5■□□□□ 0.07
SHKBP1-217ENST00000598558 EXOC7Q9UPT5 735 aa15.5■□□□□ 0.07
SHKBP1-217ENST00000598558 FAN1Q9Y2M0 1017 aa15.5■□□□□ 0.07
SHKBP1-217ENST00000598558 PCDHA5Q9Y5H7 936 aa15.5■□□□□ 0.07
SHKBP1-217ENST00000598558 CLIC2O15247 247 aa15.49■□□□□ 0.07
SHKBP1-217ENST00000598558 GUCY2FP51841 1108 aa15.49■□□□□ 0.07
SHKBP1-217ENST00000598558 YARSP54577 528 aaKnown RBP15.49■□□□□ 0.07
SHKBP1-217ENST00000598558 PSMD2Q13200 908 aa15.49■□□□□ 0.07
SHKBP1-217ENST00000598558 TUSC3Q13454 348 aa15.49■□□□□ 0.07
SHKBP1-217ENST00000598558 ZBTB6Q15916 424 aa15.49■□□□□ 0.07
SHKBP1-217ENST00000598558 SCARA3Q6AZY7 606 aa15.49■□□□□ 0.07
SHKBP1-217ENST00000598558 SLFN12LQ6IEE8 588 aa15.49■□□□□ 0.07
SHKBP1-217ENST00000598558 KANK3Q6NY19 840 aa15.49■□□□□ 0.07
SHKBP1-217ENST00000598558 SMYD4Q8IYR2 804 aaPredicted RBP15.49■□□□□ 0.07
SHKBP1-217ENST00000598558 MICALL1Q8N3F8 863 aa15.49■□□□□ 0.07
SHKBP1-217ENST00000598558 MAFAQ8NHW3 353 aaPredicted RBP15.49■□□□□ 0.07
SHKBP1-217ENST00000598558 FAM84AQ96KN4 292 aa15.49■□□□□ 0.07
SHKBP1-217ENST00000598558 FAM193BQ96PV7 902 aaPredicted RBP15.49■□□□□ 0.07
SHKBP1-217ENST00000598558 TMEM206Q9H813 350 aa15.49■□□□□ 0.07
SHKBP1-217ENST00000598558 PRDM6Q9NQX0 595 aa15.49■□□□□ 0.07
SHKBP1-217ENST00000598558 LMCD1Q9NZU5 365 aa15.49■□□□□ 0.07
SHKBP1-217ENST00000598558 MAPK8IP1Q9UQF2 711 aa15.49■□□□□ 0.07
SHKBP1-217ENST00000598558 COL4A4P53420 1690 aaPredicted RBP15.48■□□□□ 0.07
SHKBP1-217ENST00000598558 KIAA1671Q9BY89 1806 aa15.48■□□□□ 0.07
SHKBP1-217ENST00000598558 MYH11P35749 1972 aa15.48■□□□□ 0.07
SHKBP1-217ENST00000598558 FSCN2O14926 492 aa15.48■□□□□ 0.07
SHKBP1-217ENST00000598558 SLC34A2O95436 690 aa15.48■□□□□ 0.07
SHKBP1-217ENST00000598558 GARTP22102 1010 aa15.48■□□□□ 0.07
SHKBP1-217ENST00000598558 GTF2F1P35269 517 aaKnown RBP eCLIP15.48■□□□□ 0.07
SHKBP1-217ENST00000598558 KCNB1Q14721 858 aa15.48■□□□□ 0.07
SHKBP1-217ENST00000598558 KNOP1Q1ED39 458 aaKnown RBP15.48■□□□□ 0.07
SHKBP1-217ENST00000598558 TCEAL5Q5H9L2 206 aa15.48■□□□□ 0.07
SHKBP1-217ENST00000598558 ADGRD2Q7Z7M1 963 aa15.48■□□□□ 0.07
SHKBP1-217ENST00000598558 ELOA2Q8IYF1 753 aaPredicted RBP15.48■□□□□ 0.07
SHKBP1-217ENST00000598558 AUTS2Q8WXX7 1259 aa15.48■□□□□ 0.07
SHKBP1-217ENST00000598558 FAM213AQ9BRX8 229 aa15.48■□□□□ 0.07
SHKBP1-217ENST00000598558 LMAN2LQ9H0V9 348 aa15.48■□□□□ 0.07
SHKBP1-217ENST00000598558 KCTD10Q9H3F6 313 aa15.48■□□□□ 0.07
SHKBP1-217ENST00000598558 AGPAT3Q9NRZ7 376 aa15.48■□□□□ 0.07
SHKBP1-217ENST00000598558 TOPORSQ9NS56 1045 aaPredicted RBP15.48■□□□□ 0.07
SHKBP1-217ENST00000598558 HIDE1A8MVS5 230 aa15.47■□□□□ 0.07
SHKBP1-217ENST00000598558 PPM1AP35813 382 aa15.47■□□□□ 0.07
SHKBP1-217ENST00000598558 CLCNKBP51801 687 aa15.47■□□□□ 0.07
SHKBP1-217ENST00000598558 ISM2Q6H9L7 571 aa15.47■□□□□ 0.07
SHKBP1-217ENST00000598558 STXBP4Q6ZWJ1 553 aa15.47■□□□□ 0.07
SHKBP1-217ENST00000598558 DDX53Q86TM3 631 aaKnown RBP15.47■□□□□ 0.07
SHKBP1-217ENST00000598558 RNF168Q8IYW5 571 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-217ENST00000598558 C3orf58Q8NDZ4 430 aa15.47■□□□□ 0.07
SHKBP1-217ENST00000598558 HASPINQ8TF76 798 aa15.47■□□□□ 0.07
SHKBP1-217ENST00000598558 FAM212AQ96EL1 285 aa15.47■□□□□ 0.07
SHKBP1-217ENST00000598558 GPR62Q9BZJ7 368 aa15.47■□□□□ 0.07
SHKBP1-217ENST00000598558 RPF1Q9H9Y2 349 aaKnown RBP15.47■□□□□ 0.07
SHKBP1-217ENST00000598558 PLEKHA5Q9HAU0 1116 aa15.47■□□□□ 0.07
SHKBP1-217ENST00000598558 TUBGCP4Q9UGJ1 667 aa15.47■□□□□ 0.07
SHKBP1-217ENST00000598558 LZTS1Q9Y250 596 aa15.47■□□□□ 0.07
SHKBP1-217ENST00000598558 TRANK1O15050 2925 aa15.47■□□□□ 0.07
SHKBP1-217ENST00000598558 KINO60870 393 aaKnown RBP15.46■□□□□ 0.07
SHKBP1-217ENST00000598558 KIF4AO95239 1232 aa15.46■□□□□ 0.07
SHKBP1-217ENST00000598558 BMP6P22004 513 aa15.46■□□□□ 0.07
SHKBP1-217ENST00000598558 KRT17Q04695 432 aa15.46■□□□□ 0.07
SHKBP1-217ENST00000598558 UBE3AQ05086 875 aa15.46■□□□□ 0.07
SHKBP1-217ENST00000598558 HSP90AA2PQ14568 343 aaPredicted RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms