RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 LILRA6Q6PI73 481 aa16.53■□□□□ 0.24
LIG1-215ENST00000597901 DCLRE1AQ6PJP8 1040 aa16.53■□□□□ 0.24
LIG1-215ENST00000597901 SPATA31D4Q6ZUB0 917 aa16.53■□□□□ 0.24
LIG1-215ENST00000597901 HASPINQ8TF76 798 aa16.53■□□□□ 0.24
LIG1-215ENST00000597901 ACAP3Q96P50 834 aa16.53■□□□□ 0.24
LIG1-215ENST00000597901 PPP1R10Q96QC0 940 aaKnown RBP16.53■□□□□ 0.24
LIG1-215ENST00000597901 CCDC94Q9BW85 323 aaPredicted RBP16.53■□□□□ 0.24
LIG1-215ENST00000597901 SFXN1Q9H9B4 322 aa16.53■□□□□ 0.24
LIG1-215ENST00000597901 TSHZ2Q9NRE2 1034 aa16.53■□□□□ 0.24
LIG1-215ENST00000597901 FNIP2Q9P278 1114 aa16.53■□□□□ 0.24
LIG1-215ENST00000597901 LARSQ9P2J5 1176 aaKnown RBP16.53■□□□□ 0.24
LIG1-215ENST00000597901 SF3B1O75533 1304 aaKnown RBP eCLIP16.52■□□□□ 0.24
LIG1-215ENST00000597901 SPDYE4A6NLX3 237 aa16.52■□□□□ 0.24
LIG1-215ENST00000597901 C2CD4DB7Z1M9 353 aa16.52■□□□□ 0.24
LIG1-215ENST00000597901 K7ELQ4 463 aaPredicted RBP16.52■□□□□ 0.24
LIG1-215ENST00000597901 KIF4AO95239 1232 aa16.52■□□□□ 0.24
LIG1-215ENST00000597901 BRD1O95696 1058 aa16.52■□□□□ 0.24
LIG1-215ENST00000597901 GLUD1P00367 558 aa16.52■□□□□ 0.24
LIG1-215ENST00000597901 MYBP10242 640 aa16.52■□□□□ 0.24
LIG1-215ENST00000597901 MAPTP10636 758 aaKnown RBP16.52■□□□□ 0.24
LIG1-215ENST00000597901 PLCG1P19174 1290 aa16.52■□□□□ 0.24
LIG1-215ENST00000597901 IGFBP6P24592 240 aaPredicted RBP16.52■□□□□ 0.24
LIG1-215ENST00000597901 MARCKSP29966 332 aaPredicted RBP16.52■□□□□ 0.24
LIG1-215ENST00000597901 MCM6Q14566 821 aa16.52■□□□□ 0.24
LIG1-215ENST00000597901 GLRA4Q5JXX5 417 aa16.52■□□□□ 0.24
LIG1-215ENST00000597901 SPECC1Q5M775 1068 aa16.52■□□□□ 0.24
LIG1-215ENST00000597901 RTP2Q5QGT7 225 aa16.52■□□□□ 0.24
LIG1-215ENST00000597901 PRSS55Q6UWB4 352 aaPredicted RBP16.52■□□□□ 0.24
LIG1-215ENST00000597901 MPZL3Q6UWV2 235 aa16.52■□□□□ 0.24
LIG1-215ENST00000597901 TRIM67Q6ZTA4 783 aa16.52■□□□□ 0.24
LIG1-215ENST00000597901 USP49Q70CQ1 688 aa16.52■□□□□ 0.24
LIG1-215ENST00000597901 GPBP1Q86WP2 473 aa16.52■□□□□ 0.24
LIG1-215ENST00000597901 CEP57Q86XR8 500 aa16.52■□□□□ 0.24
LIG1-215ENST00000597901 HDAC7Q8WUI4 952 aa16.52■□□□□ 0.24
LIG1-215ENST00000597901 CCSER1Q9C0I3 900 aa16.52■□□□□ 0.24
LIG1-215ENST00000597901 MAN1C1Q9NR34 630 aa16.52■□□□□ 0.24
LIG1-215ENST00000597901 TOPORSQ9NS56 1045 aaPredicted RBP16.52■□□□□ 0.24
LIG1-215ENST00000597901 DPP7Q9UHL4 492 aa16.52■□□□□ 0.24
LIG1-215ENST00000597901 ODF2LQ9ULJ1 636 aa16.52■□□□□ 0.24
LIG1-215ENST00000597901 MTMR6Q9Y217 621 aa16.52■□□□□ 0.24
LIG1-215ENST00000597901 CCDC195A0A1B0GUA6 201 aa16.51■□□□□ 0.23
LIG1-215ENST00000597901 TGM5O43548 720 aa16.51■□□□□ 0.23
LIG1-215ENST00000597901 TOM1L1O75674 476 aa16.51■□□□□ 0.23
LIG1-215ENST00000597901 B3GAT3O94766 335 aa16.51■□□□□ 0.23
LIG1-215ENST00000597901 RPL17P18621 184 aaKnown RBP16.51■□□□□ 0.23
LIG1-215ENST00000597901 CEBPZQ03701 1054 aaKnown RBP16.51■□□□□ 0.23
LIG1-215ENST00000597901 CD300LGQ6UXG3 332 aa16.51■□□□□ 0.23
LIG1-215ENST00000597901 ZPBP2Q6X784 338 aa16.51■□□□□ 0.23
LIG1-215ENST00000597901 C15orf39Q6ZRI6 1047 aa16.51■□□□□ 0.23
LIG1-215ENST00000597901 HAUS6Q7Z4H7 955 aa16.51■□□□□ 0.23
LIG1-215ENST00000597901 GLYCTKQ8IVS8 523 aa16.51■□□□□ 0.23
LIG1-215ENST00000597901 MYCT1Q8N699 235 aa16.51■□□□□ 0.23
LIG1-215ENST00000597901 CMASQ8NFW8 434 aaPredicted RBP16.51■□□□□ 0.23
LIG1-215ENST00000597901 RASSF8Q8NHQ8 419 aa16.51■□□□□ 0.23
LIG1-215ENST00000597901 LNX1Q8TBB1 728 aaPredicted RBP16.51■□□□□ 0.23
LIG1-215ENST00000597901 RAD54LQ92698 747 aa16.51■□□□□ 0.23
LIG1-215ENST00000597901 EPSTI1Q96J88 318 aa16.51■□□□□ 0.23
LIG1-215ENST00000597901 MFSD14AQ96MC6 490 aa16.51■□□□□ 0.23
LIG1-215ENST00000597901 REEP2Q9BRK0 252 aa16.51■□□□□ 0.23
LIG1-215ENST00000597901 TTPALQ9BTX7 342 aa16.51■□□□□ 0.23
LIG1-215ENST00000597901 FBXO2Q9UK22 296 aaPredicted RBP16.51■□□□□ 0.23
LIG1-215ENST00000597901 USTQ9Y2C2 406 aa16.51■□□□□ 0.23
LIG1-215ENST00000597901 SRPRBQ9Y5M8 271 aaKnown RBP16.51■□□□□ 0.23
LIG1-215ENST00000597901 H0YCG3 227 aa16.5■□□□□ 0.23
LIG1-215ENST00000597901 KCNE1P15382 129 aa16.5■□□□□ 0.23
LIG1-215ENST00000597901 CLCNKBP51801 687 aa16.5■□□□□ 0.23
LIG1-215ENST00000597901 NCKAP1LP55160 1127 aa16.5■□□□□ 0.23
LIG1-215ENST00000597901 CREMQ03060 361 aa16.5■□□□□ 0.23
LIG1-215ENST00000597901 ELAVL2Q12926 359 aaKnown RBP16.5■□□□□ 0.23
LIG1-215ENST00000597901 PTPN21Q16825 1174 aa16.5■□□□□ 0.23
LIG1-215ENST00000597901 UPP1Q16831 310 aa16.5■□□□□ 0.23
LIG1-215ENST00000597901 ELMSAN1Q6PJG2 1045 aa16.5■□□□□ 0.23
LIG1-215ENST00000597901 ZDHHC14Q8IZN3 488 aa16.5■□□□□ 0.23
LIG1-215ENST00000597901 PLCD3Q8N3E9 789 aa16.5■□□□□ 0.23
LIG1-215ENST00000597901 PIK3R5Q8WYR1 880 aa16.5■□□□□ 0.23
LIG1-215ENST00000597901 KCNN1Q92952 543 aa16.5■□□□□ 0.23
LIG1-215ENST00000597901 SNX21Q969T3 373 aa16.5■□□□□ 0.23
LIG1-215ENST00000597901 UROC1Q96N76 676 aa16.5■□□□□ 0.23
LIG1-215ENST00000597901 ZMAT2Q96NC0 199 aaKnown RBP16.5■□□□□ 0.23
LIG1-215ENST00000597901 CLSTN3Q9BQT9 956 aa16.5■□□□□ 0.23
LIG1-215ENST00000597901 PLEKHA4Q9H4M7 779 aa16.5■□□□□ 0.23
LIG1-215ENST00000597901 LIMD1Q9UGP4 676 aa16.5■□□□□ 0.23
LIG1-215ENST00000597901 TMEM189-UBE2V1I3L0A0 370 aa16.49■□□□□ 0.23
LIG1-215ENST00000597901 CLDN3O15551 220 aa16.49■□□□□ 0.23
LIG1-215ENST00000597901 MEFVO15553 781 aaPredicted RBP16.49■□□□□ 0.23
LIG1-215ENST00000597901 STX6O43752 255 aa16.49■□□□□ 0.23
LIG1-215ENST00000597901 RFPL2O75678 378 aa16.49■□□□□ 0.23
LIG1-215ENST00000597901 FAM13AO94988 1023 aa16.49■□□□□ 0.23
LIG1-215ENST00000597901 KRT18P05783 430 aaKnown RBP16.49■□□□□ 0.23
LIG1-215ENST00000597901 HARSP12081 509 aaKnown RBP16.49■□□□□ 0.23
LIG1-215ENST00000597901 ZNF131P52739 623 aa16.49■□□□□ 0.23
LIG1-215ENST00000597901 SOX4Q06945 474 aaPredicted RBP16.49■□□□□ 0.23
LIG1-215ENST00000597901 SLC10A6Q3KNW5 377 aa16.49■□□□□ 0.23
LIG1-215ENST00000597901 SEZ6Q53EL9 994 aa16.49■□□□□ 0.23
LIG1-215ENST00000597901 CYP26C1Q6V0L0 522 aa16.49■□□□□ 0.23
LIG1-215ENST00000597901 HFE2Q6ZVN8 426 aa16.49■□□□□ 0.23
LIG1-215ENST00000597901 BMP8AQ7Z5Y6 402 aa16.49■□□□□ 0.23
LIG1-215ENST00000597901 LARP4BQ92615 738 aaKnown RBP16.49■□□□□ 0.23
LIG1-215ENST00000597901 DDX27Q96GQ7 796 aaKnown RBP16.49■□□□□ 0.23
LIG1-215ENST00000597901 SNX27Q96L92 541 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms