RNA–Protein interactions for RNA: ENST00000597354.1

CAPN12-206, Transcript of calpain 12, humanhuman

TSL 3

Gene CAPN12, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-206ENST00000597354 CASTOR2A6NHX0 329 aa18.28■□□□□ 0.52
CAPN12-206ENST00000597354 OGTO15294 1046 aa18.28■□□□□ 0.52
CAPN12-206ENST00000597354 MYL1P05976 194 aa18.28■□□□□ 0.52
CAPN12-206ENST00000597354 THP07101 528 aa18.28■□□□□ 0.52
CAPN12-206ENST00000597354 IRS1P35568 1242 aa18.28■□□□□ 0.52
CAPN12-206ENST00000597354 DSC1Q08554 894 aa18.28■□□□□ 0.52
CAPN12-206ENST00000597354 CAMK1Q14012 370 aa18.28■□□□□ 0.52
CAPN12-206ENST00000597354 PTPROQ16827 1216 aa18.28■□□□□ 0.52
CAPN12-206ENST00000597354 SLC10A6Q3KNW5 377 aa18.28■□□□□ 0.52
CAPN12-206ENST00000597354 SLFN12LQ6IEE8 588 aa18.28■□□□□ 0.52
CAPN12-206ENST00000597354 KANK3Q6NY19 840 aa18.28■□□□□ 0.52
CAPN12-206ENST00000597354 KIAA0895Q8NCT3 520 aa18.28■□□□□ 0.52
CAPN12-206ENST00000597354 ZNF507Q8TCN5 953 aa18.28■□□□□ 0.52
CAPN12-206ENST00000597354 MRPL38Q96DV4 380 aaKnown RBP18.28■□□□□ 0.52
CAPN12-206ENST00000597354 SAAL1Q96ER3 474 aa18.28■□□□□ 0.52
CAPN12-206ENST00000597354 ZMAT2Q96NC0 199 aaKnown RBP18.28■□□□□ 0.52
CAPN12-206ENST00000597354 PAAF1Q9BRP4 392 aa18.28■□□□□ 0.52
CAPN12-206ENST00000597354 TOPORSQ9NS56 1045 aaPredicted RBP18.28■□□□□ 0.52
CAPN12-206ENST00000597354 AGO2Q9UKV8 859 aaKnown RBP18.28■□□□□ 0.52
CAPN12-206ENST00000597354 ZMYM2Q9UBW7 1377 aa18.28■□□□□ 0.52
CAPN12-206ENST00000597354 CITO14578 2027 aa18.27■□□□□ 0.52
CAPN12-206ENST00000597354 SMIM28A0A1B0GU29 152 aa18.27■□□□□ 0.52
CAPN12-206ENST00000597354 GOLGA8IPA6NC78 632 aa18.27■□□□□ 0.52
CAPN12-206ENST00000597354 GOLGA8JA6NMD2 632 aa18.27■□□□□ 0.52
CAPN12-206ENST00000597354 EIF3DO15371 548 aaKnown RBP eCLIP18.27■□□□□ 0.52
CAPN12-206ENST00000597354 FAM189A1O60320 539 aa18.27■□□□□ 0.52
CAPN12-206ENST00000597354 KINO60870 393 aaKnown RBP18.27■□□□□ 0.52
CAPN12-206ENST00000597354 CLTAP09496 248 aa18.27■□□□□ 0.52
CAPN12-206ENST00000597354 ERVFC1P60507 584 aa18.27■□□□□ 0.52
CAPN12-206ENST00000597354 UBE2HP62256 183 aa18.27■□□□□ 0.52
CAPN12-206ENST00000597354 ENOX2Q16206 610 aaKnown RBP18.27■□□□□ 0.52
CAPN12-206ENST00000597354 ALKAL1Q6UXT8 129 aa18.27■□□□□ 0.52
CAPN12-206ENST00000597354 TMEM130Q8N3G9 435 aa18.27■□□□□ 0.52
CAPN12-206ENST00000597354 MICAL1Q8TDZ2 1067 aa18.27■□□□□ 0.52
CAPN12-206ENST00000597354 TMEM169Q96HH4 297 aa18.27■□□□□ 0.52
CAPN12-206ENST00000597354 CCDC34Q96HJ3 373 aa18.27■□□□□ 0.52
CAPN12-206ENST00000597354 IGSF21Q96ID5 467 aa18.27■□□□□ 0.52
CAPN12-206ENST00000597354 CBWD1Q9BRT8 395 aa18.27■□□□□ 0.52
CAPN12-206ENST00000597354 TMEM175Q9BSA9 504 aa18.27■□□□□ 0.52
CAPN12-206ENST00000597354 GOLGA2P5Q9HBQ8 144 aa18.27■□□□□ 0.52
CAPN12-206ENST00000597354 STYXL1Q9Y6J8 313 aa18.27■□□□□ 0.52
CAPN12-206ENST00000597354 MYO7AQ13402 2215 aa18.27■□□□□ 0.52
CAPN12-206ENST00000597354 POU3F3P20264 500 aaPredicted RBP18.26■□□□□ 0.51
CAPN12-206ENST00000597354 PPM1AP35813 382 aa18.26■□□□□ 0.51
CAPN12-206ENST00000597354 PLCB3Q01970 1234 aa18.26■□□□□ 0.51
CAPN12-206ENST00000597354 KRT17Q04695 432 aa18.26■□□□□ 0.51
CAPN12-206ENST00000597354 NAB2Q15742 525 aa18.26■□□□□ 0.51
CAPN12-206ENST00000597354 CCDC47Q96A33 483 aaKnown RBP18.26■□□□□ 0.51
CAPN12-206ENST00000597354 C18orf25Q96B23 403 aaPredicted RBP18.26■□□□□ 0.51
CAPN12-206ENST00000597354 TIGD1Q96MW7 591 aa18.26■□□□□ 0.51
CAPN12-206ENST00000597354 PPP1R10Q96QC0 940 aaKnown RBP18.26■□□□□ 0.51
CAPN12-206ENST00000597354 RPF1Q9H9Y2 349 aaKnown RBP18.26■□□□□ 0.51
CAPN12-206ENST00000597354 MARCH5Q9NX47 278 aa18.26■□□□□ 0.51
CAPN12-206ENST00000597354 CPSF3Q9UKF6 684 aaKnown RBP18.26■□□□□ 0.51
CAPN12-206ENST00000597354 MAPK8IP1Q9UQF2 711 aa18.26■□□□□ 0.51
CAPN12-206ENST00000597354 ATG2AQ2TAZ0 1938 aa18.25■□□□□ 0.51
CAPN12-206ENST00000597354 LACTBL1A8MY62 500 aa18.25■□□□□ 0.51
CAPN12-206ENST00000597354 CLIC2O15247 247 aa18.25■□□□□ 0.51
CAPN12-206ENST00000597354 TGFB1I1O43294 461 aa18.25■□□□□ 0.51
CAPN12-206ENST00000597354 CA8P35219 290 aa18.25■□□□□ 0.51
CAPN12-206ENST00000597354 SOX4Q06945 474 aaPredicted RBP18.25■□□□□ 0.51
CAPN12-206ENST00000597354 PSMD2Q13200 908 aa18.25■□□□□ 0.51
CAPN12-206ENST00000597354 TUSC3Q13454 348 aa18.25■□□□□ 0.51
CAPN12-206ENST00000597354 XKR4Q5GH76 650 aa18.25■□□□□ 0.51
CAPN12-206ENST00000597354 PLPP4Q5VZY2 271 aa18.25■□□□□ 0.51
CAPN12-206ENST00000597354 ARMCX5Q6P1M9 558 aa18.25■□□□□ 0.51
CAPN12-206ENST00000597354 HASPINQ8TF76 798 aa18.25■□□□□ 0.51
CAPN12-206ENST00000597354 FAM213AQ9BRX8 229 aa18.25■□□□□ 0.51
CAPN12-206ENST00000597354 VN1R3Q9BXE9 311 aa18.25■□□□□ 0.51
CAPN12-206ENST00000597354 LMAN2LQ9H0V9 348 aa18.25■□□□□ 0.51
CAPN12-206ENST00000597354 TLR9Q9NR96 1032 aa18.25■□□□□ 0.51
CAPN12-206ENST00000597354 LMCD1Q9NZU5 365 aa18.25■□□□□ 0.51
CAPN12-206ENST00000597354 CNTN3Q9P232 1028 aa18.25■□□□□ 0.51
CAPN12-206ENST00000597354 PUF60Q9UHX1 559 aaKnown RBP18.25■□□□□ 0.51
CAPN12-206ENST00000597354 TTC26A0AVF1 554 aa18.24■□□□□ 0.51
CAPN12-206ENST00000597354 RHOBTB3O94955 611 aa18.24■□□□□ 0.51
CAPN12-206ENST00000597354 GARTP22102 1010 aa18.24■□□□□ 0.51
CAPN12-206ENST00000597354 IGFBP6P24592 240 aaPredicted RBP18.24■□□□□ 0.51
CAPN12-206ENST00000597354 UBE3AQ05086 875 aa18.24■□□□□ 0.51
CAPN12-206ENST00000597354 PPP2R3AQ06190 1150 aa18.24■□□□□ 0.51
CAPN12-206ENST00000597354 SKIV2LQ15477 1246 aaKnown RBP18.24■□□□□ 0.51
CAPN12-206ENST00000597354 KYAT1Q16773 422 aa18.24■□□□□ 0.51
CAPN12-206ENST00000597354 TCEAL5Q5H9L2 206 aa18.24■□□□□ 0.51
CAPN12-206ENST00000597354 ISM2Q6H9L7 571 aa18.24■□□□□ 0.51
CAPN12-206ENST00000597354 CRELD2Q6UXH1 353 aaPredicted RBP18.24■□□□□ 0.51
CAPN12-206ENST00000597354 SMYD4Q8IYR2 804 aaPredicted RBP18.24■□□□□ 0.51
CAPN12-206ENST00000597354 AUTS2Q8WXX7 1259 aa18.24■□□□□ 0.51
CAPN12-206ENST00000597354 TCF25Q9BQ70 676 aa18.24■□□□□ 0.51
CAPN12-206ENST00000597354 COLEC11Q9BWP8 271 aa18.24■□□□□ 0.51
CAPN12-206ENST00000597354 ENTPD7Q9NQZ7 604 aa18.24■□□□□ 0.51
CAPN12-206ENST00000597354 PCDHA5Q9Y5H7 936 aa18.24■□□□□ 0.51
CAPN12-206ENST00000597354 UBE4BO95155 1302 aa18.23■□□□□ 0.51
CAPN12-206ENST00000597354 TADA2AO75478 443 aa18.23■□□□□ 0.51
CAPN12-206ENST00000597354 KCNE1P15382 129 aa18.23■□□□□ 0.51
CAPN12-206ENST00000597354 CYP2J2P51589 502 aa18.23■□□□□ 0.51
CAPN12-206ENST00000597354 CLCNKBP51801 687 aa18.23■□□□□ 0.51
CAPN12-206ENST00000597354 GUCY2FP51841 1108 aa18.23■□□□□ 0.51
CAPN12-206ENST00000597354 HSP90AA2PQ14568 343 aaPredicted RBP18.23■□□□□ 0.51
CAPN12-206ENST00000597354 KNOP1Q1ED39 458 aaKnown RBP18.23■□□□□ 0.51
CAPN12-206ENST00000597354 BMT2Q1RMZ1 405 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms