RNA–Protein interactions for RNA: ENST00000596644.5

IRF3-211, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-211ENST00000596644 CXCL8P10145 99 aa16.35■□□□□ 0.21
IRF3-211ENST00000596644 ERVFC1P60507 584 aa16.35■□□□□ 0.21
IRF3-211ENST00000596644 BMS1Q14692 1282 aaKnown RBP16.35■□□□□ 0.21
IRF3-211ENST00000596644 POSTNQ15063 836 aa16.35■□□□□ 0.21
IRF3-211ENST00000596644 PLPP4Q5VZY2 271 aa16.35■□□□□ 0.21
IRF3-211ENST00000596644 PDE12Q6L8Q7 609 aaKnown RBP16.35■□□□□ 0.21
IRF3-211ENST00000596644 TMC7Q7Z402 723 aa16.35■□□□□ 0.21
IRF3-211ENST00000596644 DDX53Q86TM3 631 aaKnown RBP16.35■□□□□ 0.21
IRF3-211ENST00000596644 BCL7CQ8WUZ0 217 aaPredicted RBP16.35■□□□□ 0.21
IRF3-211ENST00000596644 POMGNT1Q8WZA1 660 aa16.35■□□□□ 0.21
IRF3-211ENST00000596644 IKZF4Q9H2S9 585 aa16.35■□□□□ 0.21
IRF3-211ENST00000596644 PCDHGC5Q9Y5F6 944 aa16.35■□□□□ 0.21
IRF3-211ENST00000596644 PDCD11Q14690 1871 aaKnown RBP16.34■□□□□ 0.21
IRF3-211ENST00000596644 SMIM28A0A1B0GU29 152 aa16.34■□□□□ 0.21
IRF3-211ENST00000596644 FSCN2O14926 492 aa16.34■□□□□ 0.21
IRF3-211ENST00000596644 EIF3DO15371 548 aaKnown RBP eCLIP16.34■□□□□ 0.21
IRF3-211ENST00000596644 TNFSF9P41273 254 aa16.34■□□□□ 0.21
IRF3-211ENST00000596644 PPP2R3AQ06190 1150 aa16.34■□□□□ 0.21
IRF3-211ENST00000596644 HSP90AA2PQ14568 343 aaPredicted RBP16.34■□□□□ 0.21
IRF3-211ENST00000596644 KANK3Q6NY19 840 aa16.34■□□□□ 0.21
IRF3-211ENST00000596644 ALKAL1Q6UXT8 129 aa16.34■□□□□ 0.21
IRF3-211ENST00000596644 VPS52Q8N1B4 723 aa16.34■□□□□ 0.21
IRF3-211ENST00000596644 GLIS3Q8NEA6 775 aa16.34■□□□□ 0.21
IRF3-211ENST00000596644 CCDC47Q96A33 483 aaKnown RBP16.34■□□□□ 0.21
IRF3-211ENST00000596644 PPP1R10Q96QC0 940 aaKnown RBP16.34■□□□□ 0.21
IRF3-211ENST00000596644 RPF1Q9H9Y2 349 aaKnown RBP16.34■□□□□ 0.21
IRF3-211ENST00000596644 SLC39A2Q9NP94 309 aa16.34■□□□□ 0.21
IRF3-211ENST00000596644 NGRNQ9NPE2 291 aaKnown RBP16.34■□□□□ 0.21
IRF3-211ENST00000596644 SLC38A7Q9NVC3 462 aa16.34■□□□□ 0.21
IRF3-211ENST00000596644 MARCH5Q9NX47 278 aa16.34■□□□□ 0.21
IRF3-211ENST00000596644 CNTN3Q9P232 1028 aa16.34■□□□□ 0.21
IRF3-211ENST00000596644 CACNG4Q9UBN1 327 aa16.34■□□□□ 0.21
IRF3-211ENST00000596644 STK39Q9UEW8 545 aa16.34■□□□□ 0.21
IRF3-211ENST00000596644 AGO2Q9UKV8 859 aaKnown RBP16.34■□□□□ 0.21
IRF3-211ENST00000596644 STYXL1Q9Y6J8 313 aa16.34■□□□□ 0.21
IRF3-211ENST00000596644 MYO7AQ13402 2215 aa16.33■□□□□ 0.2
IRF3-211ENST00000596644 KLRC4O43908 158 aa16.33■□□□□ 0.2
IRF3-211ENST00000596644 PRR29P0C7W0 189 aa16.33■□□□□ 0.2
IRF3-211ENST00000596644 KCNE1P15382 129 aa16.33■□□□□ 0.2
IRF3-211ENST00000596644 FAM160A1Q05DH4 1040 aa16.33■□□□□ 0.2
IRF3-211ENST00000596644 EHHADHQ08426 723 aa16.33■□□□□ 0.2
IRF3-211ENST00000596644 SMC1AQ14683 1233 aaKnown RBP16.33■□□□□ 0.2
IRF3-211ENST00000596644 NAB2Q15742 525 aa16.33■□□□□ 0.2
IRF3-211ENST00000596644 SLC10A6Q3KNW5 377 aa16.33■□□□□ 0.2
IRF3-211ENST00000596644 KMT5BQ4FZB7 885 aa16.33■□□□□ 0.2
IRF3-211ENST00000596644 XKR4Q5GH76 650 aa16.33■□□□□ 0.2
IRF3-211ENST00000596644 ZBTB41Q5SVQ8 909 aa16.33■□□□□ 0.2
IRF3-211ENST00000596644 EP400NLQ6ZTU2 488 aa16.33■□□□□ 0.2
IRF3-211ENST00000596644 ADGRD2Q7Z7M1 963 aa16.33■□□□□ 0.2
IRF3-211ENST00000596644 FMR1NBQ8N0W7 255 aaPredicted RBP16.33■□□□□ 0.2
IRF3-211ENST00000596644 RABGGTAQ92696 567 aa16.33■□□□□ 0.2
IRF3-211ENST00000596644 IPO9Q96P70 1041 aaKnown RBP16.33■□□□□ 0.2
IRF3-211ENST00000596644 IGFLR1Q9H665 355 aa16.33■□□□□ 0.2
IRF3-211ENST00000596644 PLEKHA5Q9HAU0 1116 aa16.33■□□□□ 0.2
IRF3-211ENST00000596644 PRDM6Q9NQX0 595 aa16.33■□□□□ 0.2
IRF3-211ENST00000596644 TSHZ2Q9NRE2 1034 aa16.33■□□□□ 0.2
IRF3-211ENST00000596644 THEGQ9P2T0 379 aa16.33■□□□□ 0.2
IRF3-211ENST00000596644 UBE4BO95155 1302 aa16.33■□□□□ 0.2
IRF3-211ENST00000596644 F8W810 466 aa16.32■□□□□ 0.2
IRF3-211ENST00000596644 FAM189A1O60320 539 aa16.32■□□□□ 0.2
IRF3-211ENST00000596644 TADA2AO75478 443 aa16.32■□□□□ 0.2
IRF3-211ENST00000596644 RPN1P04843 607 aaKnown RBP16.32■□□□□ 0.2
IRF3-211ENST00000596644 NRIP1P48552 1158 aa16.32■□□□□ 0.2
IRF3-211ENST00000596644 ACOT2P49753 483 aa16.32■□□□□ 0.2
IRF3-211ENST00000596644 HYAL1Q12794 435 aa16.32■□□□□ 0.2
IRF3-211ENST00000596644 ENOX2Q16206 610 aaKnown RBP16.32■□□□□ 0.2
IRF3-211ENST00000596644 ARMCX5Q6P1M9 558 aa16.32■□□□□ 0.2
IRF3-211ENST00000596644 EPM2AIP1Q7L775 607 aaPredicted RBP16.32■□□□□ 0.2
IRF3-211ENST00000596644 RBM23Q86U06 439 aaKnown RBP16.32■□□□□ 0.2
IRF3-211ENST00000596644 NELFCDQ8IXH7 590 aa16.32■□□□□ 0.2
IRF3-211ENST00000596644 TMEM87AQ8NBN3 555 aa16.32■□□□□ 0.2
IRF3-211ENST00000596644 ZNF507Q8TCN5 953 aa16.32■□□□□ 0.2
IRF3-211ENST00000596644 NOC3LQ8WTT2 800 aaKnown RBP16.32■□□□□ 0.2
IRF3-211ENST00000596644 HLA-CQ95604 372 aa16.32■□□□□ 0.2
IRF3-211ENST00000596644 FAM212AQ96EL1 285 aa16.32■□□□□ 0.2
IRF3-211ENST00000596644 UROC1Q96N76 676 aa16.32■□□□□ 0.2
IRF3-211ENST00000596644 ZMAT2Q96NC0 199 aaKnown RBP16.32■□□□□ 0.2
IRF3-211ENST00000596644 PAAF1Q9BRP4 392 aa16.32■□□□□ 0.2
IRF3-211ENST00000596644 VN1R3Q9BXE9 311 aa16.32■□□□□ 0.2
IRF3-211ENST00000596644 ZBP1Q9H171 429 aa16.32■□□□□ 0.2
IRF3-211ENST00000596644 TLE6Q9H808 572 aa16.32■□□□□ 0.2
IRF3-211ENST00000596644 GOLGA2P5Q9HBQ8 144 aa16.32■□□□□ 0.2
IRF3-211ENST00000596644 CPSF3Q9UKF6 684 aaKnown RBP16.32■□□□□ 0.2
IRF3-211ENST00000596644 ADAM28Q9UKQ2 775 aa16.32■□□□□ 0.2
IRF3-211ENST00000596644 COG5Q9UP83 839 aa16.32■□□□□ 0.2
IRF3-211ENST00000596644 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.31■□□□□ 0.2
IRF3-211ENST00000596644 TTC26A0AVF1 554 aa16.31■□□□□ 0.2
IRF3-211ENST00000596644 MEFVO15553 781 aaPredicted RBP16.31■□□□□ 0.2
IRF3-211ENST00000596644 NCK2O43639 380 aa16.31■□□□□ 0.2
IRF3-211ENST00000596644 KIF4AO95239 1232 aa16.31■□□□□ 0.2
IRF3-211ENST00000596644 CXCL14O95715 111 aa16.31■□□□□ 0.2
IRF3-211ENST00000596644 SOD2P04179 222 aa16.31■□□□□ 0.2
IRF3-211ENST00000596644 CTSAP10619 480 aa16.31■□□□□ 0.2
IRF3-211ENST00000596644 GARTP22102 1010 aa16.31■□□□□ 0.2
IRF3-211ENST00000596644 ADSSP30520 456 aa16.31■□□□□ 0.2
IRF3-211ENST00000596644 DPYDQ12882 1025 aa16.31■□□□□ 0.2
IRF3-211ENST00000596644 PSMD2Q13200 908 aa16.31■□□□□ 0.2
IRF3-211ENST00000596644 FUT10Q6P4F1 479 aa16.31■□□□□ 0.2
IRF3-211ENST00000596644 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.31■□□□□ 0.2
IRF3-211ENST00000596644 HASPINQ8TF76 798 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms