RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 MLF2Q15773 248 aaPredicted RBP11.03□□□□□ -0.64
LIG1-209ENST00000596104 PPM1LQ5SGD2 360 aa11.03□□□□□ -0.64
LIG1-209ENST00000596104 MTSS1LQ765P7 747 aa11.03□□□□□ -0.64
LIG1-209ENST00000596104 MAEAQ7L5Y9 396 aa11.03□□□□□ -0.64
LIG1-209ENST00000596104 CEP57Q86XR8 500 aa11.03□□□□□ -0.64
LIG1-209ENST00000596104 CCDC43Q96MW1 224 aaKnown RBP11.03□□□□□ -0.64
LIG1-209ENST00000596104 SNTG2Q9NY99 539 aa11.03□□□□□ -0.64
LIG1-209ENST00000596104 DLL3Q9NYJ7 618 aa11.03□□□□□ -0.64
LIG1-209ENST00000596104 MTF2Q9Y483 593 aaPredicted RBP11.03□□□□□ -0.64
LIG1-209ENST00000596104 CEP250Q9BV73 2442 aa11.03□□□□□ -0.64
LIG1-209ENST00000596104 DMXL1Q9Y485 3027 aa11.02□□□□□ -0.65
LIG1-209ENST00000596104 TMEM189-UBE2V1I3L0A0 370 aa11.02□□□□□ -0.65
LIG1-209ENST00000596104 N4BP3O15049 544 aa11.02□□□□□ -0.65
LIG1-209ENST00000596104 NEMFO60524 1076 aa11.02□□□□□ -0.65
LIG1-209ENST00000596104 XYLBO75191 536 aa11.02□□□□□ -0.65
LIG1-209ENST00000596104 EDN1P05305 212 aa11.02□□□□□ -0.65
LIG1-209ENST00000596104 THP07101 528 aa11.02□□□□□ -0.65
LIG1-209ENST00000596104 FGFR3P22607 806 aa11.02□□□□□ -0.65
LIG1-209ENST00000596104 TXKP42681 527 aa11.02□□□□□ -0.65
LIG1-209ENST00000596104 ELAVL2Q12926 359 aaKnown RBP11.02□□□□□ -0.65
LIG1-209ENST00000596104 PUM1Q14671 1186 aaKnown RBP eCLIP11.02□□□□□ -0.652e-9■■□□□ 12.1
LIG1-209ENST00000596104 ZNF528Q3MIS6 628 aa11.02□□□□□ -0.65
LIG1-209ENST00000596104 SLC44A4Q53GD3 710 aa11.02□□□□□ -0.65
LIG1-209ENST00000596104 EEF1DP3Q658K8 133 aa11.02□□□□□ -0.65
LIG1-209ENST00000596104 PDXDC1Q6P996 788 aa11.02□□□□□ -0.65
LIG1-209ENST00000596104 RSPO2Q6UXX9 243 aaPredicted RBP11.02□□□□□ -0.65
LIG1-209ENST00000596104 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.02□□□□□ -0.65
LIG1-209ENST00000596104 DGLUCYQ7Z3D6 616 aa11.02□□□□□ -0.65
LIG1-209ENST00000596104 ZBTB8OSQ8IWT0 167 aa11.02□□□□□ -0.65
LIG1-209ENST00000596104 NPAS3Q8IXF0 933 aa11.02□□□□□ -0.65
LIG1-209ENST00000596104 MCPH1Q8NEM0 835 aa11.02□□□□□ -0.65
LIG1-209ENST00000596104 SLC7A14Q8TBB6 771 aa11.02□□□□□ -0.65
LIG1-209ENST00000596104 BSNDQ8WZ55 320 aa11.02□□□□□ -0.65
LIG1-209ENST00000596104 WASF1Q92558 559 aa11.02□□□□□ -0.65
LIG1-209ENST00000596104 OSBPL6Q9BZF3 934 aa11.02□□□□□ -0.65
LIG1-209ENST00000596104 CCDC113Q9H0I3 377 aa11.02□□□□□ -0.65
LIG1-209ENST00000596104 TMEM60Q9H2L4 133 aa11.02□□□□□ -0.65
LIG1-209ENST00000596104 HCFC1R1Q9NWW0 138 aa11.02□□□□□ -0.65
LIG1-209ENST00000596104 DNMT3BQ9UBC3 853 aaKnown RBP11.02□□□□□ -0.65
LIG1-209ENST00000596104 MTRRQ9UBK8 725 aa11.02□□□□□ -0.65
LIG1-209ENST00000596104 FBXO4Q9UKT5 387 aa11.02□□□□□ -0.65
LIG1-209ENST00000596104 KCNH3Q9ULD8 1083 aa11.02□□□□□ -0.65
LIG1-209ENST00000596104 USP20Q9Y2K6 914 aa11.02□□□□□ -0.65
LIG1-209ENST00000596104 BTBD18B2RXH4 712 aa11.01□□□□□ -0.65
LIG1-209ENST00000596104 ACKR2O00590 384 aa11.01□□□□□ -0.65
LIG1-209ENST00000596104 KINO60870 393 aaKnown RBP11.01□□□□□ -0.65
LIG1-209ENST00000596104 OR1D2P34982 312 aa11.01□□□□□ -0.65
LIG1-209ENST00000596104 PFKPQ01813 784 aa11.01□□□□□ -0.65
LIG1-209ENST00000596104 UBXN2BQ14CS0 331 aa11.01□□□□□ -0.65
LIG1-209ENST00000596104 UVSSAQ2YD98 709 aa11.01□□□□□ -0.65
LIG1-209ENST00000596104 AXDND1Q5T1B0 1012 aaPredicted RBP11.01□□□□□ -0.65
LIG1-209ENST00000596104 POTEHQ6S545 545 aa11.01□□□□□ -0.65
LIG1-209ENST00000596104 CD300LGQ6UXG3 332 aa11.01□□□□□ -0.65
LIG1-209ENST00000596104 RTL10Q7L3V2 364 aa11.01□□□□□ -0.65
LIG1-209ENST00000596104 CATSPER3Q86XQ3 398 aa11.01□□□□□ -0.65
LIG1-209ENST00000596104 NOSTRINQ8IVI9 506 aa11.01□□□□□ -0.65
LIG1-209ENST00000596104 NELL1Q92832 810 aa11.01□□□□□ -0.65
LIG1-209ENST00000596104 HINFPQ9BQA5 517 aa11.01□□□□□ -0.65
LIG1-209ENST00000596104 KXD1Q9BQD3 176 aa11.01□□□□□ -0.65
LIG1-209ENST00000596104 BCO2Q9BYV7 579 aa11.01□□□□□ -0.65
LIG1-209ENST00000596104 C2orf40Q9H1Z8 148 aa11.01□□□□□ -0.65
LIG1-209ENST00000596104 BRMS1Q9HCU9 246 aa11.01□□□□□ -0.65
LIG1-209ENST00000596104 TUFT1Q9NNX1 390 aa11.01□□□□□ -0.65
LIG1-209ENST00000596104 LTB4R2Q9NPC1 389 aa11.01□□□□□ -0.65
LIG1-209ENST00000596104 SPATA6Q9NWH7 488 aaPredicted RBP11.01□□□□□ -0.65
LIG1-209ENST00000596104 POLIQ9UNA4 740 aa11.01□□□□□ -0.65
LIG1-209ENST00000596104 COL4A3Q01955 1670 aa11.01□□□□□ -0.65
LIG1-209ENST00000596104 ARID2Q68CP9 1835 aa11□□□□□ -0.65
LIG1-209ENST00000596104 SHISA7A6NL88 538 aa11□□□□□ -0.65
LIG1-209ENST00000596104 FAM170BA6NMN3 283 aa11□□□□□ -0.65
LIG1-209ENST00000596104 SPTLC1O15269 473 aa11□□□□□ -0.65
LIG1-209ENST00000596104 LAMTOR5O43504 91 aa11□□□□□ -0.65
LIG1-209ENST00000596104 MED24O75448 989 aa11□□□□□ -0.65
LIG1-209ENST00000596104 B3GAT3O94766 335 aa11□□□□□ -0.65
LIG1-209ENST00000596104 PRKCBP05771 671 aa11□□□□□ -0.65
LIG1-209ENST00000596104 CYP11B2P19099 503 aa11□□□□□ -0.65
LIG1-209ENST00000596104 ATP2B1P20020 1258 aa11□□□□□ -0.65
LIG1-209ENST00000596104 CD72P21854 359 aa11□□□□□ -0.65
LIG1-209ENST00000596104 TARSP26639 723 aaKnown RBP11□□□□□ -0.65
LIG1-209ENST00000596104 NAMPTP43490 491 aa11□□□□□ -0.65
LIG1-209ENST00000596104 RBM25P49756 843 aaKnown RBP11□□□□□ -0.65
LIG1-209ENST00000596104 PRPF4BQ13523 1007 aaKnown RBP11□□□□□ -0.65
LIG1-209ENST00000596104 MAPK6Q16659 721 aa11□□□□□ -0.65
LIG1-209ENST00000596104 PABPC1LQ4VXU2 614 aaKnown RBP11□□□□□ -0.65
LIG1-209ENST00000596104 DIS3L2Q8IYB7 885 aaKnown RBP11□□□□□ -0.65
LIG1-209ENST00000596104 NECAB1Q8N987 351 aa11□□□□□ -0.65
LIG1-209ENST00000596104 ZBTB44Q8NCP5 570 aa11□□□□□ -0.65
LIG1-209ENST00000596104 NSUN7Q8NE18 718 aaKnown RBP11□□□□□ -0.65
LIG1-209ENST00000596104 ING5Q8WYH8 240 aa11□□□□□ -0.65
LIG1-209ENST00000596104 CLDN23Q96B33 292 aa11□□□□□ -0.65
LIG1-209ENST00000596104 DDX27Q96GQ7 796 aaKnown RBP11□□□□□ -0.65
LIG1-209ENST00000596104 BORCS6Q96GS4 357 aa11□□□□□ -0.65
LIG1-209ENST00000596104 PPP1R10Q96QC0 940 aaKnown RBP11□□□□□ -0.65
LIG1-209ENST00000596104 PCDHGA2Q9Y5H1 932 aa11□□□□□ -0.65
LIG1-209ENST00000596104 BACE2Q9Y5Z0 518 aa11□□□□□ -0.65
LIG1-209ENST00000596104 CACNA1IQ9P0X4 2223 aa10.99□□□□□ -0.65
LIG1-209ENST00000596104 LILRB5O75023 590 aa10.99□□□□□ -0.65
LIG1-209ENST00000596104 ECI2O75521 394 aa10.99□□□□□ -0.65
LIG1-209ENST00000596104 LARGE1O95461 756 aa10.99□□□□□ -0.65
LIG1-209ENST00000596104 RHOP08100 348 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms