RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 CMASQ8NFW8 434 aaPredicted RBP25.76■■□□□ 1.71
LSM4-204ENST00000594828 HDAC7Q8WUI4 952 aa25.76■■□□□ 1.71
LSM4-204ENST00000594828 CALML4Q96GE6 196 aa25.76■■□□□ 1.71
LSM4-204ENST00000594828 PPP1R10Q96QC0 940 aaKnown RBP25.76■■□□□ 1.71
LSM4-204ENST00000594828 CCDC195A0A1B0GUA6 201 aa25.75■■□□□ 1.71
LSM4-204ENST00000594828 SPATA31D3P0C874 917 aa25.75■■□□□ 1.71
LSM4-204ENST00000594828 OSTNP61366 133 aa25.75■■□□□ 1.71
LSM4-204ENST00000594828 ELAVL2Q12926 359 aaKnown RBP25.75■■□□□ 1.71
LSM4-204ENST00000594828 STRN3Q13033 797 aa25.75■■□□□ 1.71
LSM4-204ENST00000594828 RTP2Q5QGT7 225 aa25.75■■□□□ 1.71
LSM4-204ENST00000594828 PRSS55Q6UWB4 352 aaPredicted RBP25.75■■□□□ 1.71
LSM4-204ENST00000594828 SPATA31D4Q6ZUB0 917 aa25.75■■□□□ 1.71
LSM4-204ENST00000594828 CEP57Q86XR8 500 aa25.75■■□□□ 1.71
LSM4-204ENST00000594828 ZDHHC14Q8IZN3 488 aa25.75■■□□□ 1.71
LSM4-204ENST00000594828 CEP120Q8N960 986 aa25.75■■□□□ 1.71
LSM4-204ENST00000594828 PBXIP1Q96AQ6 731 aa25.75■■□□□ 1.71
LSM4-204ENST00000594828 TTPALQ9BTX7 342 aa25.75■■□□□ 1.71
LSM4-204ENST00000594828 BACH2Q9BYV9 841 aa25.75■■□□□ 1.71
LSM4-204ENST00000594828 TOPORSQ9NS56 1045 aaPredicted RBP25.75■■□□□ 1.71
LSM4-204ENST00000594828 TGM5O43548 720 aa25.74■■□□□ 1.71
LSM4-204ENST00000594828 MCF2P10911 925 aa25.74■■□□□ 1.71
LSM4-204ENST00000594828 RPL17P18621 184 aaKnown RBP25.74■■□□□ 1.71
LSM4-204ENST00000594828 PROZP22891 400 aa25.74■■□□□ 1.71
LSM4-204ENST00000594828 LONP1P36776 959 aaKnown RBP25.74■■□□□ 1.71
LSM4-204ENST00000594828 ARSHQ5FYA8 562 aa25.74■■□□□ 1.71
LSM4-204ENST00000594828 CCDC149Q6ZUS6 474 aa25.74■■□□□ 1.71
LSM4-204ENST00000594828 KREMEN2Q8NCW0 462 aa25.74■■□□□ 1.71
LSM4-204ENST00000594828 TMEM161BQ8NDZ6 487 aa25.74■■□□□ 1.71
LSM4-204ENST00000594828 PLEKHA4Q9H4M7 779 aa25.74■■□□□ 1.71
LSM4-204ENST00000594828 LIMD1Q9UGP4 676 aa25.74■■□□□ 1.71
LSM4-204ENST00000594828 NPHP3-ACAD11A0A0J9YXS1 232 aa25.73■■□□□ 1.71
LSM4-204ENST00000594828 SMIM28A0A1B0GU29 152 aa25.73■■□□□ 1.71
LSM4-204ENST00000594828 LILRA6Q6PI73 481 aa25.73■■□□□ 1.71
LSM4-204ENST00000594828 DCLRE1AQ6PJP8 1040 aa25.73■■□□□ 1.71
LSM4-204ENST00000594828 MPZL3Q6UWV2 235 aa25.73■■□□□ 1.71
LSM4-204ENST00000594828 ALKAL1Q6UXT8 129 aa25.73■■□□□ 1.71
LSM4-204ENST00000594828 CYP26C1Q6V0L0 522 aa25.73■■□□□ 1.71
LSM4-204ENST00000594828 ACSF2Q96CM8 615 aaPredicted RBP25.73■■□□□ 1.71
LSM4-204ENST00000594828 ACAP3Q96P50 834 aa25.73■■□□□ 1.71
LSM4-204ENST00000594828 LARSQ9P2J5 1176 aaKnown RBP25.73■■□□□ 1.71
LSM4-204ENST00000594828 SORCS3Q9UPU3 1222 aa25.73■■□□□ 1.71
LSM4-204ENST00000594828 ABLIM1O14639 778 aa25.72■■□□□ 1.71
LSM4-204ENST00000594828 RFPL2O75678 378 aa25.72■■□□□ 1.71
LSM4-204ENST00000594828 B3GAT3O94766 335 aa25.72■■□□□ 1.71
LSM4-204ENST00000594828 BRD1O95696 1058 aa25.72■■□□□ 1.71
LSM4-204ENST00000594828 MAPTP10636 758 aaKnown RBP25.72■■□□□ 1.71
LSM4-204ENST00000594828 CLCNKBP51801 687 aa25.72■■□□□ 1.71
LSM4-204ENST00000594828 CACNB1Q02641 598 aaPredicted RBP25.72■■□□□ 1.71
LSM4-204ENST00000594828 GRIN1Q05586 938 aa25.72■■□□□ 1.71
LSM4-204ENST00000594828 XKR4Q5GH76 650 aa25.72■■□□□ 1.71
LSM4-204ENST00000594828 OTOP3Q7RTS5 596 aa25.72■■□□□ 1.71
LSM4-204ENST00000594828 RASSF8Q8NHQ8 419 aa25.72■■□□□ 1.71
LSM4-204ENST00000594828 LNX1Q8TBB1 728 aaPredicted RBP25.72■■□□□ 1.71
LSM4-204ENST00000594828 PIK3R5Q8WYR1 880 aa25.72■■□□□ 1.71
LSM4-204ENST00000594828 ZBTB45Q96K62 511 aaPredicted RBP25.72■■□□□ 1.71
LSM4-204ENST00000594828 UROC1Q96N76 676 aa25.72■■□□□ 1.71
LSM4-204ENST00000594828 PLXNA3P51805 1871 aa25.72■■□□□ 1.71
LSM4-204ENST00000594828 TECTAO75443 2155 aa25.72■■□□□ 1.71
LSM4-204ENST00000594828 TMEM189-UBE2V1I3L0A0 370 aa25.71■■□□□ 1.71
LSM4-204ENST00000594828 TOM1L1O75674 476 aa25.71■■□□□ 1.71
LSM4-204ENST00000594828 HARSP12081 509 aaKnown RBP25.71■■□□□ 1.71
LSM4-204ENST00000594828 MTMR3Q13615 1198 aa25.71■■□□□ 1.71
LSM4-204ENST00000594828 DHX8Q14562 1220 aaKnown RBP25.71■■□□□ 1.71
LSM4-204ENST00000594828 PSMD5Q16401 504 aa25.71■■□□□ 1.71
LSM4-204ENST00000594828 UPP1Q16831 310 aa25.71■■□□□ 1.71
LSM4-204ENST00000594828 PDXDC1Q6P996 788 aa25.71■■□□□ 1.71
LSM4-204ENST00000594828 GPBP1Q86WP2 473 aa25.71■■□□□ 1.71
LSM4-204ENST00000594828 UBALD2Q8IYN6 164 aa25.71■■□□□ 1.71
LSM4-204ENST00000594828 CLSTN3Q9BQT9 956 aa25.71■■□□□ 1.71
LSM4-204ENST00000594828 RHOBTB2Q9BYZ6 727 aa25.71■■□□□ 1.71
LSM4-204ENST00000594828 SLC38A7Q9NVC3 462 aa25.71■■□□□ 1.71
LSM4-204ENST00000594828 ODF2LQ9ULJ1 636 aa25.71■■□□□ 1.71
LSM4-204ENST00000594828 H0YCG3 227 aa25.7■■□□□ 1.7
LSM4-204ENST00000594828 ASGR2P07307 311 aa25.7■■□□□ 1.7
LSM4-204ENST00000594828 SYT1P21579 422 aa25.7■■□□□ 1.7
LSM4-204ENST00000594828 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.7■■□□□ 1.7
LSM4-204ENST00000594828 LRRC15Q8TF66 581 aa25.7■■□□□ 1.7
LSM4-204ENST00000594828 SMG7Q92540 1137 aaKnown RBP25.7■■□□□ 1.7
LSM4-204ENST00000594828 ASIC4Q96FT7 647 aa25.7■■□□□ 1.7
LSM4-204ENST00000594828 PIDD1Q9HB75 910 aa25.7■■□□□ 1.7
LSM4-204ENST00000594828 GOLGA2P5Q9HBQ8 144 aa25.7■■□□□ 1.7
LSM4-204ENST00000594828 BLOC1S4Q9NUP1 217 aa25.7■■□□□ 1.7
LSM4-204ENST00000594828 ANKFY1Q9P2R3 1169 aa25.7■■□□□ 1.7
LSM4-204ENST00000594828 CLIC4Q9Y696 253 aa25.7■■□□□ 1.7
LSM4-204ENST00000594828 TRAPPC3O43617 180 aa25.69■■□□□ 1.7
LSM4-204ENST00000594828 PLCG1P19174 1290 aa25.69■■□□□ 1.7
LSM4-204ENST00000594828 IGFBP6P24592 240 aaPredicted RBP25.69■■□□□ 1.7
LSM4-204ENST00000594828 KARSQ15046 597 aaKnown RBP25.69■■□□□ 1.7
LSM4-204ENST00000594828 ZPBP2Q6X784 338 aa25.69■■□□□ 1.7
LSM4-204ENST00000594828 HAUS6Q7Z4H7 955 aa25.69■■□□□ 1.7
LSM4-204ENST00000594828 SUGP1Q8IWZ8 645 aaKnown RBP25.69■■□□□ 1.7
LSM4-204ENST00000594828 DDX27Q96GQ7 796 aaKnown RBP25.69■■□□□ 1.7
LSM4-204ENST00000594828 INTS4Q96HW7 963 aaKnown RBP25.69■■□□□ 1.7
LSM4-204ENST00000594828 SNX27Q96L92 541 aa25.69■■□□□ 1.7
LSM4-204ENST00000594828 ZMAT2Q96NC0 199 aaKnown RBP25.69■■□□□ 1.7
LSM4-204ENST00000594828 REEP2Q9BRK0 252 aa25.69■■□□□ 1.7
LSM4-204ENST00000594828 KCNH6Q9H252 994 aa25.69■■□□□ 1.7
LSM4-204ENST00000594828 WDR6Q9NNW5 1121 aaKnown RBP25.69■■□□□ 1.7
LSM4-204ENST00000594828 ZDHHC7Q9NXF8 308 aa25.69■■□□□ 1.7
LSM4-204ENST00000594828 CLDN3O15551 220 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms