RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 LRRN2O75325 713 aa16.43■□□□□ 0.22
VRK3-207ENST00000594092 STAG3L1P0CL83 205 aa16.43■□□□□ 0.22
VRK3-207ENST00000594092 CCL5P13501 91 aa16.43■□□□□ 0.22
VRK3-207ENST00000594092 HNRNPH3P31942 346 aaKnown RBP16.43■□□□□ 0.22
VRK3-207ENST00000594092 GJB7Q6PEY0 223 aa16.43■□□□□ 0.22
VRK3-207ENST00000594092 SLC43A3Q8NBI5 491 aa16.43■□□□□ 0.22
VRK3-207ENST00000594092 SEMA4DQ92854 862 aa16.43■□□□□ 0.22
VRK3-207ENST00000594092 PPP1R13BQ96KQ4 1090 aa16.43■□□□□ 0.22
VRK3-207ENST00000594092 DEFB118Q96PH6 123 aa16.43■□□□□ 0.22
VRK3-207ENST00000594092 RNF208Q9H0X6 261 aa16.43■□□□□ 0.22
VRK3-207ENST00000594092 STARD7Q9NQZ5 370 aa16.43■□□□□ 0.22
VRK3-207ENST00000594092 AJAP1Q9UKB5 411 aaPredicted RBP16.43■□□□□ 0.22
VRK3-207ENST00000594092 PLAGL2Q9UPG8 496 aa16.43■□□□□ 0.22
VRK3-207ENST00000594092 CHRNA1P02708 482 aa16.42■□□□□ 0.22
VRK3-207ENST00000594092 C4BPAP04003 597 aaKnown RBP16.42■□□□□ 0.22
VRK3-207ENST00000594092 CLTAP09496 248 aa16.42■□□□□ 0.22
VRK3-207ENST00000594092 CTSHP09668 335 aa16.42■□□□□ 0.22
VRK3-207ENST00000594092 AXLP30530 894 aa16.42■□□□□ 0.22
VRK3-207ENST00000594092 MGAT3Q09327 533 aa16.42■□□□□ 0.22
VRK3-207ENST00000594092 PTK7Q13308 1070 aa16.42■□□□□ 0.22
VRK3-207ENST00000594092 DCAF4L1Q3SXM0 396 aa16.42■□□□□ 0.22
VRK3-207ENST00000594092 IQCEQ6IPM2 695 aa16.42■□□□□ 0.22
VRK3-207ENST00000594092 NOTUMQ6P988 496 aa16.42■□□□□ 0.22
VRK3-207ENST00000594092 FBXL13Q8NEE6 735 aa16.42■□□□□ 0.22
VRK3-207ENST00000594092 TAS1R2Q8TE23 839 aa16.42■□□□□ 0.22
VRK3-207ENST00000594092 DHX38Q92620 1227 aaKnown RBP16.42■□□□□ 0.22
VRK3-207ENST00000594092 C16orf45Q96MC5 204 aaPredicted RBP16.42■□□□□ 0.22
VRK3-207ENST00000594092 SENP6Q9GZR1 1112 aaPredicted RBP16.42■□□□□ 0.22
VRK3-207ENST00000594092 NUCKS1Q9H1E3 243 aaKnown RBP16.42■□□□□ 0.22
VRK3-207ENST00000594092 RPF1Q9H9Y2 349 aaKnown RBP16.42■□□□□ 0.22
VRK3-207ENST00000594092 APEX2Q9UBZ4 518 aa16.42■□□□□ 0.22
VRK3-207ENST00000594092 NOC2LQ9Y3T9 749 aaKnown RBP16.42■□□□□ 0.22
VRK3-207ENST00000594092 A0A0U1RQG5 324 aaPredicted RBP16.42■□□□□ 0.22
VRK3-207ENST00000594092 RBAK-RBAKDNI3L0D1 243 aa16.42■□□□□ 0.22
VRK3-207ENST00000594092 DNM1LO00429 736 aa16.42■□□□□ 0.22
VRK3-207ENST00000594092 CXCL8P10145 99 aa16.42■□□□□ 0.22
VRK3-207ENST00000594092 HSPA8P11142 646 aaKnown RBP16.42■□□□□ 0.22
VRK3-207ENST00000594092 THPOP40225 353 aa16.42■□□□□ 0.22
VRK3-207ENST00000594092 POU5F1Q01860 360 aaKnown RBP16.42■□□□□ 0.22
VRK3-207ENST00000594092 MTF1Q14872 753 aa16.42■□□□□ 0.22
VRK3-207ENST00000594092 SURF1Q15526 300 aa16.42■□□□□ 0.22
VRK3-207ENST00000594092 ZACNQ401N2 412 aa16.42■□□□□ 0.22
VRK3-207ENST00000594092 TDRD10Q5VZ19 366 aaKnown RBP16.42■□□□□ 0.22
VRK3-207ENST00000594092 PHLDB3Q6NSJ2 640 aa16.42■□□□□ 0.22
VRK3-207ENST00000594092 SLC27A1Q6PCB7 646 aa16.42■□□□□ 0.22
VRK3-207ENST00000594092 RAD9BQ6WBX8 426 aa16.42■□□□□ 0.22
VRK3-207ENST00000594092 TOGARAM2Q6ZUX3 1019 aa16.42■□□□□ 0.22
VRK3-207ENST00000594092 FAM228AQ86W67 206 aa16.42■□□□□ 0.22
VRK3-207ENST00000594092 OR5B17Q8NGF7 314 aa16.42■□□□□ 0.22
VRK3-207ENST00000594092 FAM212AQ96EL1 285 aa16.42■□□□□ 0.22
VRK3-207ENST00000594092 CHP1Q99653 195 aa16.42■□□□□ 0.22
VRK3-207ENST00000594092 RAB20Q9NX57 234 aa16.42■□□□□ 0.22
VRK3-207ENST00000594092 NOD1Q9Y239 953 aa16.42■□□□□ 0.22
VRK3-207ENST00000594092 PPP2R2CQ9Y2T4 447 aa16.42■□□□□ 0.22
VRK3-207ENST00000594092 MEFVO15553 781 aaPredicted RBP16.41■□□□□ 0.22
VRK3-207ENST00000594092 NPTXRO95502 500 aa16.41■□□□□ 0.22
VRK3-207ENST00000594092 CCDC175P0C221 793 aa16.41■□□□□ 0.22
VRK3-207ENST00000594092 PTPN14Q15678 1187 aa16.41■□□□□ 0.22
VRK3-207ENST00000594092 KYAT1Q16773 422 aa16.41■□□□□ 0.22
VRK3-207ENST00000594092 TRIM71Q2Q1W2 868 aaKnown RBP16.41■□□□□ 0.22
VRK3-207ENST00000594092 APBB1IPQ7Z5R6 666 aaPredicted RBP16.41■□□□□ 0.22
VRK3-207ENST00000594092 CTU1Q7Z7A3 348 aaKnown RBP16.41■□□□□ 0.22
VRK3-207ENST00000594092 WDR49Q8IV35 697 aa16.41■□□□□ 0.22
VRK3-207ENST00000594092 SYN2Q92777 582 aaPredicted RBP16.41■□□□□ 0.22
VRK3-207ENST00000594092 EIF2AQ9BY44 585 aaKnown RBP16.41■□□□□ 0.22
VRK3-207ENST00000594092 DNAJC12Q9UKB3 198 aa16.41■□□□□ 0.22
VRK3-207ENST00000594092 OGDHLQ9ULD0 1010 aa16.41■□□□□ 0.22
VRK3-207ENST00000594092 MYO6Q9UM54 1294 aa16.41■□□□□ 0.22
VRK3-207ENST00000594092 PIN4Q9Y237 131 aaKnown RBP16.41■□□□□ 0.22
VRK3-207ENST00000594092 DAAM1Q9Y4D1 1078 aa16.41■□□□□ 0.22
VRK3-207ENST00000594092 GOLGA6L9A6NEM1 432 aa16.4■□□□□ 0.22
VRK3-207ENST00000594092 ARVCFO00192 962 aa16.4■□□□□ 0.22
VRK3-207ENST00000594092 B4GALT4O60513 344 aa16.4■□□□□ 0.22
VRK3-207ENST00000594092 IL18RAPO95256 599 aa16.4■□□□□ 0.22
VRK3-207ENST00000594092 GRM5P41594 1212 aa16.4■□□□□ 0.22
VRK3-207ENST00000594092 JAM2P57087 298 aa16.4■□□□□ 0.22
VRK3-207ENST00000594092 CDK17Q00537 523 aa16.4■□□□□ 0.22
VRK3-207ENST00000594092 RAPGEF1Q13905 1077 aa16.4■□□□□ 0.22
VRK3-207ENST00000594092 SFMBT2Q5VUG0 894 aa16.4■□□□□ 0.22
VRK3-207ENST00000594092 ARHGEF19Q8IW93 802 aa16.4■□□□□ 0.22
VRK3-207ENST00000594092 SPAG5Q96R06 1193 aa16.4■□□□□ 0.22
VRK3-207ENST00000594092 TRPV6Q9H1D0 765 aa16.4■□□□□ 0.22
VRK3-207ENST00000594092 ANK1P16157 1881 aa16.4■□□□□ 0.22
VRK3-207ENST00000594092 LACTBL1A8MY62 500 aa16.4■□□□□ 0.22
VRK3-207ENST00000594092 VNN1O95497 513 aa16.4■□□□□ 0.22
VRK3-207ENST00000594092 HLA-DRAP01903 254 aa16.4■□□□□ 0.22
VRK3-207ENST00000594092 TNNT1P13805 278 aa16.4■□□□□ 0.22
VRK3-207ENST00000594092 RFX1P22670 979 aa16.4■□□□□ 0.22
VRK3-207ENST00000594092 AP3M2P53677 418 aa16.4■□□□□ 0.22
VRK3-207ENST00000594092 BIRC3Q13489 604 aa16.4■□□□□ 0.22
VRK3-207ENST00000594092 SLC10A6Q3KNW5 377 aa16.4■□□□□ 0.22
VRK3-207ENST00000594092 NYAP1Q6ZVC0 841 aa16.4■□□□□ 0.22
VRK3-207ENST00000594092 GPIHBP1Q8IV16 184 aa16.4■□□□□ 0.22
VRK3-207ENST00000594092 EFCAB13Q8IY85 973 aa16.4■□□□□ 0.22
VRK3-207ENST00000594092 DESI2Q9BSY9 194 aa16.4■□□□□ 0.22
VRK3-207ENST00000594092 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.4■□□□□ 0.224e-6■■■■■ 48.8
VRK3-207ENST00000594092 AIPL1Q9NZN9 384 aa16.4■□□□□ 0.22
VRK3-207ENST00000594092 MROH7Q68CQ1 1323 aa16.4■□□□□ 0.22
VRK3-207ENST00000594092 KIF2AO00139 706 aaPredicted RBP16.39■□□□□ 0.21
VRK3-207ENST00000594092 RPS6KA5O75582 802 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms